BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033690
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicag...   127   3e-27
ref|XP_003620942.1| Photosystem I assembly protein Ycf3 [Medicag...   125   1e-26
ref|XP_003605620.1| Photosystem I assembly protein Ycf3 [Medicag...   124   3e-26
pir||A05190 hypothetical protein 77 - common tobacco chloroplast...   121   2e-25
ref|YP_006503792.1| photosystem I assembly protein Ycf3 (chlorop...   106   9e-21

>ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
           gi|355488619|gb|AES69822.1| Photosystem I assembly
           protein Ycf3 [Medicago truncatula]
          Length = 160

 Score =  127 bits (320), Expect = 3e-27
 Identities = 62/71 (87%), Positives = 64/71 (90%)
 Frame = +2

Query: 725 RMR*ETLKYGSKGRN*LAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEA 904
           RM  ETLKYGSKGRN L YSDRGEQAIRQGDSEIAE+WFDQAAEYWKQA+ALTPGN IEA
Sbjct: 90  RMSQETLKYGSKGRNLLTYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEA 149

Query: 905 HNWLKITRRFE 937
            NWLKIT RFE
Sbjct: 150 QNWLKITGRFE 160


>ref|XP_003620942.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
           gi|355495957|gb|AES77160.1| Photosystem I assembly
           protein Ycf3 [Medicago truncatula]
          Length = 70

 Score =  125 bits (315), Expect = 1e-26
 Identities = 60/67 (89%), Positives = 62/67 (92%)
 Frame = +2

Query: 737 ETLKYGSKGRN*LAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWL 916
           ETLKYGSKGRN L YSDRGEQAIRQGDSEIAE+WFDQAAEYWKQA+ALTPGN IEA NWL
Sbjct: 4   ETLKYGSKGRNLLTYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWL 63

Query: 917 KITRRFE 937
           KIT RFE
Sbjct: 64  KITGRFE 70


>ref|XP_003605620.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
           gi|355506675|gb|AES87817.1| Photosystem I assembly
           protein Ycf3 [Medicago truncatula]
          Length = 201

 Score =  124 bits (311), Expect = 3e-26
 Identities = 61/71 (85%), Positives = 63/71 (88%)
 Frame = +2

Query: 725 RMR*ETLKYGSKGRN*LAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEA 904
           RM  ETLKYGSKGRN L  SDRGEQAIRQGDSEIAE+WFDQAAEYWKQA+ALTPGN IEA
Sbjct: 131 RMSQETLKYGSKGRNLLTNSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEA 190

Query: 905 HNWLKITRRFE 937
            NWLKIT RFE
Sbjct: 191 QNWLKITGRFE 201


>pir||A05190 hypothetical protein 77 - common tobacco chloroplast
           gi|225199|prf||1211235AD ORF 77
          Length = 77

 Score =  121 bits (304), Expect = 2e-25
 Identities = 64/77 (83%), Positives = 67/77 (87%)
 Frame = -3

Query: 907 MRFNRITRSKRHSLFPILSGLIEPSLRYFRISLSNGLFSPVGIGESIPSLRTVLESFLPH 728
           MRFN IT SKR+SLFPILSGLIEPSL  FRISL NGLFSP GIG SIPSLRTVLE+FLPH
Sbjct: 1   MRFNIITGSKRYSLFPILSGLIEPSLCNFRISLLNGLFSPAGIGSSIPSLRTVLENFLPH 60

Query: 727 TAQQSILLVSPILIYHI 677
           TAQQSILLVS   +YHI
Sbjct: 61  TAQQSILLVSHFDLYHI 77


>ref|YP_006503792.1| photosystem I assembly protein Ycf3 (chloroplast) [Datura
           stramonium] gi|350996427|gb|AEQ36939.1| photosystem I
           assembly protein Ycf3 (chloroplast) [Datura stramonium]
           gi|350996579|gb|AEQ37090.1| photosystem I assembly
           protein Ycf3 [Datura stramonium]
          Length = 170

 Score =  106 bits (264), Expect = 9e-21
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +2

Query: 779 YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
           YS RGEQAI+QGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 118 YSGRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 170