BLASTX nr result

ID: Panax21_contig00033686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033686
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]    82   3e-14
emb|CAN79518.1| hypothetical protein VITISV_026066 [Vitis vinifera]    80   2e-13
emb|CAN66932.1| hypothetical protein VITISV_030313 [Vitis vinifera]    79   4e-13
gb|AAT38779.2| Polyprotein, putative [Solanum demissum]                76   3e-12
gb|AAT39281.2| Integrase core domain containing protein [Solanum...    76   3e-12

>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 50/118 (42%), Positives = 70/118 (59%)
 Frame = +2

Query: 2   SNELSIIGEPPSDIDLVVHVLNGLVPAFKEIAAALRACDNPISFEDLHDKLVEYEIFLKR 181
           ++EL++I    SD DL +  LNGL   FKEI+AA+RA + PISFE+LHDKLVE+E FLKR
Sbjct: 164 ADELALIDTHLSDDDLTIFALNGLGSGFKEISAAIRARETPISFEELHDKLVEHETFLKR 223

Query: 182 EEVRAVSPTIAAHVTQRSGQSTTSTPRHYNNNKASSNNRGHPPFSTFNRGYQGSNQPH 355
           EE R  S  +  + T+ S  +  S   +  N    SNN      +  ++G + +N  H
Sbjct: 224 EESRGGS-NVTVNSTRTSFGNFQSRYGNGQNGNGQSNNGKRVFNNRHSQGRKFNNNGH 280


>emb|CAN79518.1| hypothetical protein VITISV_026066 [Vitis vinifera]
          Length = 532

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
 Frame = +2

Query: 5   NELSIIGEPPSDIDLVVHVLNGLVPAFKEIAAALRACDNPISFEDLHDKLVEYEIFLKRE 184
           +EL+II  P SD DL +++LNGL P F EIA  +RAC+  + FE++HD LV +E +L+  
Sbjct: 179 DELAIIDHPVSDDDLTLYILNGLGPEFIEIATPIRACETSLKFEEIHDLLVGHESYLRWL 238

Query: 185 EVRAVSPTI-AAHVTQRSGQSTTSTPRHYNNNKASS----NNRGHPPFSTFNRGYQGSNQ 349
           E ++V+  I  AH + R G    ++ +H  + KASS    NN GH    + N G++    
Sbjct: 239 ENQSVATFIPTAHYSHRQG---GASGQHKPSPKASSNKTHNNNGHHKNESSNSGHRKFKP 295

Query: 350 PHKKCPGQGY 379
             + C   G+
Sbjct: 296 KCQWCDQMGH 305


>emb|CAN66932.1| hypothetical protein VITISV_030313 [Vitis vinifera]
          Length = 414

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 45/131 (34%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
 Frame = +2

Query: 2   SNELSIIGEPPSDIDLVVHVLNGLVPAFKEIAAALRACDNPISFEDLHDKLVEYEIFLKR 181
           +++L+ +G P S+ ++++HV NGL   FKEI+AA+RA D+P++FE+LHDKL + E  LK+
Sbjct: 170 TBDLAFMGYPLSEDEIILHVFNGLDNDFKEISAAIRARDSPVTFEELHDKLQDQETXLKQ 229

Query: 182 EEVRAVSPTIAAHVTQR------SGQSTTSTPRHYNNNKASSNNRGHPPFSTFNRGYQGS 343
           ++    +P I A    +      + + +   P    NNK S+NN G+   + F+   +  
Sbjct: 230 DDTSKEAPPIXAQFHHKFSNHKGNSEKSGGHPGGNFNNKGSTNNFGNR--NIFDNQGKNI 287

Query: 344 NQPHKKCPGQG 376
            Q +K    QG
Sbjct: 288 VQGNKNXSNQG 298


>gb|AAT38779.2| Polyprotein, putative [Solanum demissum]
          Length = 369

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
 Frame = +2

Query: 5   NELSIIGEPPSDIDLVVHVLNGLVPAFKEIAAALRACDNPISFEDLHDKLVEYEIFLKRE 184
           +EL+  G P S+ +L+V +L GL P F+EI+AA+RA D+ IS+ +L++KL+++E+F+K E
Sbjct: 147 DELATAGAPMSNEELIVKILTGLGPKFREISAAIRARDSAISYPELYEKLLDHELFIKHE 206

Query: 185 EVR-----AVSPTIAAHVTQRSGQSTTSTPRHYNNNKASSNNRGHPPFSTFNRGYQGSNQ 349
           E +      ++  IA  +     Q  TS  R   N+  ++ +R   P    N   Q    
Sbjct: 207 EAKKPLLTPITAAIAQQINMHPRQGNTSNRRSNANSPNTNQSRRAQPSRAGNNNQQQRYD 266

Query: 350 PHKKC 364
              KC
Sbjct: 267 HTLKC 271


>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
          Length = 1760

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
 Frame = +2

Query: 5   NELSIIGEPPSDIDLVVHVLNGLVPAFKEIAAALRACDNPISFEDLHDKLVEYEIFLKRE 184
           +EL+  G P S+ +L+V +L GL P F+EI+AA+RA D+ IS+ +L++KL+++E+F+K E
Sbjct: 147 DELATAGAPMSNEELIVKILTGLGPKFREISAAIRARDSAISYPELYEKLLDHELFIKHE 206

Query: 185 EVR-----AVSPTIAAHVTQRSGQSTTSTPRHYNNNKASSNNRGHPPFSTFNRGYQGSNQ 349
           E +      ++  IA  +     Q  TS  R   N+  ++ +R   P    N   Q    
Sbjct: 207 EAKKPLLTPITAAIAQQINMHPRQGNTSNRRSNANSPNTNQSRRAQPSRAGNNNQQQRYD 266

Query: 350 PHKKC 364
              KC
Sbjct: 267 HTLKC 271


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