BLASTX nr result

ID: Panax21_contig00033676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033676
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_195956.1| DC1 domain-containing protein [Arabidopsis thal...    59   4e-07
ref|NP_001190213.1| DC1 domain-containing protein [Arabidopsis t...    59   4e-07
ref|NP_199385.2| cysteine/histidine-rich C1 domain-containing pr...    58   7e-07
ref|XP_002336168.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
dbj|BAB09215.1| CHP-rich zinc finger protein-like [Arabidopsis t...    58   7e-07

>ref|NP_195956.1| DC1 domain-containing protein [Arabidopsis thaliana]
           gi|332003208|gb|AED90591.1| DC1 domain-containing
           protein [Arabidopsis thaliana]
          Length = 1610

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/63 (46%), Positives = 38/63 (60%)
 Frame = +1

Query: 232 LSHWSHKEHPLILLEELQSNNNTHENIDDEMLCNGCVQPISAADQFYSCIQCNFFLHKIC 411
           + H+SHK H L L E      NT  + D+ M C  CV+PI   + FYSC+QC+F LH+ C
Sbjct: 410 IQHFSHKHHHLRLDE------NTDRDYDENMECQACVRPIYFGN-FYSCMQCDFILHEAC 462

Query: 412 TNL 420
            NL
Sbjct: 463 ANL 465



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
 Frame = +1

Query: 181  GKPSDAESNST----IIAAHQLSHWSHKEHPLILLEELQSNNNTHENIDDEMLCNGCVQP 348
            GKP + E         I+   + H+SH +H L L E      NT ++ D++ LC  C+ P
Sbjct: 1389 GKPEEVEEEVVEPFVTISHGIIQHFSHPQHHLKLDE------NTSKDYDEDKLCQACIMP 1442

Query: 349  ISAADQFYSCIQCNFFLHKICTN 417
            I   + FYSC+QC++ LH  C +
Sbjct: 1443 IYFGN-FYSCVQCDYILHDECAS 1464


>ref|NP_001190213.1| DC1 domain-containing protein [Arabidopsis thaliana]
           gi|7378616|emb|CAB83292.1| putative protein [Arabidopsis
           thaliana] gi|26450157|dbj|BAC42197.1| unknown protein
           [Arabidopsis thaliana] gi|332003209|gb|AED90592.1| DC1
           domain-containing protein [Arabidopsis thaliana]
          Length = 684

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/63 (46%), Positives = 38/63 (60%)
 Frame = +1

Query: 232 LSHWSHKEHPLILLEELQSNNNTHENIDDEMLCNGCVQPISAADQFYSCIQCNFFLHKIC 411
           + H+SHK H L L E      NT  + D+ M C  CV+PI   + FYSC+QC+F LH+ C
Sbjct: 410 IQHFSHKHHHLRLDE------NTDRDYDENMECQACVRPIYFGN-FYSCMQCDFILHEAC 462

Query: 412 TNL 420
            NL
Sbjct: 463 ANL 465


>ref|NP_199385.2| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis
           thaliana] gi|332007907|gb|AED95290.1|
           cysteine/histidine-rich C1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 560

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = +1

Query: 184 KPSDA--ESNSTIIAAHQLSHWSHKEHPLILLEELQSNNNTHENIDDEMLCNGCVQPISA 357
           KP D   E    +I   ++ H+SH+EH L    +L  ++N  +   ++M C+ C++PI +
Sbjct: 242 KPEDEGEEDPYKVINEKEIIHFSHEEHNL----KLGDDDNAADY--EKMWCDACIRPIDS 295

Query: 358 ADQFYSCIQCNFFLHKICTNL 420
            D F+ C++C FFLHK+C +L
Sbjct: 296 -DPFFKCVECKFFLHKVCASL 315


>ref|XP_002336168.1| predicted protein [Populus trichocarpa] gi|222874811|gb|EEF11942.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/64 (43%), Positives = 39/64 (60%)
 Frame = +1

Query: 229 QLSHWSHKEHPLILLEELQSNNNTHENIDDEMLCNGCVQPISAADQFYSCIQCNFFLHKI 408
           ++ HWSH +H LIL+++          +DD++ C+GC+ PIS    FYSC  CNFFL K 
Sbjct: 394 EIDHWSH-QHNLILIDK----------VDDDLKCDGCMFPISTP--FYSCASCNFFLDKT 440

Query: 409 CTNL 420
           C  L
Sbjct: 441 CIEL 444


>dbj|BAB09215.1| CHP-rich zinc finger protein-like [Arabidopsis thaliana]
          Length = 519

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = +1

Query: 184 KPSDA--ESNSTIIAAHQLSHWSHKEHPLILLEELQSNNNTHENIDDEMLCNGCVQPISA 357
           KP D   E    +I   ++ H+SH+EH L    +L  ++N  +   ++M C+ C++PI +
Sbjct: 242 KPEDEGEEDPYKVINEKEIIHFSHEEHNL----KLGDDDNAADY--EKMWCDACIRPIDS 295

Query: 358 ADQFYSCIQCNFFLHKICTNL 420
            D F+ C++C FFLHK+C +L
Sbjct: 296 -DPFFKCVECKFFLHKVCASL 315


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