BLASTX nr result

ID: Panax21_contig00033668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033668
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   143   1e-32
emb|CAN66468.1| hypothetical protein VITISV_016565 [Vitis vinifera]   143   1e-32
emb|CBI23303.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta...   131   4e-30
ref|XP_004134961.1| PREDICTED: protein AUXIN SIGNALING F-BOX 3-l...   134   8e-30

>ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Vitis vinifera]
          Length = 583

 Score =  143 bits (361), Expect = 1e-32
 Identities = 73/92 (79%), Positives = 77/92 (83%)
 Frame = +3

Query: 126 SNSKEEQQGIGELTRFNSPCAIPRLERVLALVKSHKDRSSVSLVCKDWYNAERWSRTRIF 305
           S  K++     ELTR +SP     LERVL LVKSHKDRSSVSLVCKDWYNAERWSRT +F
Sbjct: 3   SKRKKDSPESNELTR-SSPFPDEVLERVLGLVKSHKDRSSVSLVCKDWYNAERWSRTHVF 61

Query: 306 IGNCYSVSPEIVARRFPNIRSVTLKGKPRFSD 401
           IGNCYSVSPEIVARRFPNIRSVTLKGKPRFSD
Sbjct: 62  IGNCYSVSPEIVARRFPNIRSVTLKGKPRFSD 93


>emb|CAN66468.1| hypothetical protein VITISV_016565 [Vitis vinifera]
          Length = 620

 Score =  143 bits (361), Expect = 1e-32
 Identities = 73/92 (79%), Positives = 77/92 (83%)
 Frame = +3

Query: 126 SNSKEEQQGIGELTRFNSPCAIPRLERVLALVKSHKDRSSVSLVCKDWYNAERWSRTRIF 305
           S  K++     ELTR +SP     LERVL LVKSHKDRSSVSLVCKDWYNAERWSRT +F
Sbjct: 3   SKRKKDSPESNELTR-SSPFPDEVLERVLGLVKSHKDRSSVSLVCKDWYNAERWSRTHVF 61

Query: 306 IGNCYSVSPEIVARRFPNIRSVTLKGKPRFSD 401
           IGNCYSVSPEIVARRFPNIRSVTLKGKPRFSD
Sbjct: 62  IGNCYSVSPEIVARRFPNIRSVTLKGKPRFSD 93


>emb|CBI23303.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/90 (80%), Positives = 77/90 (85%)
 Frame = +3

Query: 132 SKEEQQGIGELTRFNSPCAIPRLERVLALVKSHKDRSSVSLVCKDWYNAERWSRTRIFIG 311
           +K++     ELTR +SP     LERVL LVKSHKDRSSVSLVCKDWYNAERWSRT +FIG
Sbjct: 8   TKKDSPESNELTR-SSPFPDEVLERVLGLVKSHKDRSSVSLVCKDWYNAERWSRTHVFIG 66

Query: 312 NCYSVSPEIVARRFPNIRSVTLKGKPRFSD 401
           NCYSVSPEIVARRFPNIRSVTLKGKPRFSD
Sbjct: 67  NCYSVSPEIVARRFPNIRSVTLKGKPRFSD 96


>ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
           gi|223536047|gb|EEF37705.1| TRANSPORT INHIBITOR RESPONSE
           1 protein, putative [Ricinus communis]
          Length = 589

 Score =  131 bits (330), Expect(2) = 4e-30
 Identities = 62/68 (91%), Positives = 65/68 (95%)
 Frame = +3

Query: 198 LERVLALVKSHKDRSSVSLVCKDWYNAERWSRTRIFIGNCYSVSPEIVARRFPNIRSVTL 377
           LERVL L+KS+KDRSSVSLVCKDWYNAERWSRT +FIGNCYSVSPEIVARRFP IRSVTL
Sbjct: 29  LERVLGLLKSNKDRSSVSLVCKDWYNAERWSRTHVFIGNCYSVSPEIVARRFPKIRSVTL 88

Query: 378 KGKPRFSD 401
           KGKPRFSD
Sbjct: 89  KGKPRFSD 96



 Score = 24.6 bits (52), Expect(2) = 4e-30
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 130 ILKRSSKESGNSPDSTHLAPFPD 198
           I+K+S     + PDST  + FPD
Sbjct: 4   IIKKSRASPESPPDSTRTSQFPD 26


>ref|XP_004134961.1| PREDICTED: protein AUXIN SIGNALING F-BOX 3-like [Cucumis sativus]
           gi|449528142|ref|XP_004171065.1| PREDICTED: protein
           AUXIN SIGNALING F-BOX 3-like [Cucumis sativus]
          Length = 584

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/93 (72%), Positives = 76/93 (81%), Gaps = 3/93 (3%)
 Frame = +3

Query: 132 SKEEQQGIGELTRFNSPCAI---PRLERVLALVKSHKDRSSVSLVCKDWYNAERWSRTRI 302
           S + ++G G+    N   +I     LERVL+LVKSH+DRSSVSLVCKDW+NAERWSRT +
Sbjct: 2   SSKRRKGSGDSDESNRAGSIFPDEVLERVLSLVKSHRDRSSVSLVCKDWFNAERWSRTHV 61

Query: 303 FIGNCYSVSPEIVARRFPNIRSVTLKGKPRFSD 401
           FIGNCYSVSPEIV RRFPNIRSVTLKGKPRFSD
Sbjct: 62  FIGNCYSVSPEIVIRRFPNIRSVTLKGKPRFSD 94


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