BLASTX nr result

ID: Panax21_contig00033652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033652
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299527.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
emb|CAN83212.1| hypothetical protein VITISV_010891 [Vitis vinifera]    52   9e-06

>ref|XP_002299527.1| predicted protein [Populus trichocarpa] gi|222846785|gb|EEE84332.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/71 (42%), Positives = 37/71 (52%)
 Frame = +1

Query: 271 QQIWEFRRGXXXXXXXXXXXXXXXTGEPLLKKHKLVSNLISPENDEIDDISGYHQNDQLE 450
           QQ WEFRR                +GEP LKKHKL+S+ IS +NDE  D S  HQ    +
Sbjct: 8   QQCWEFRR--KDDDSDSSSNDSKPSGEPALKKHKLISSFISVDNDETSDASKLHQIGNCD 65

Query: 451 PGEGAYFETGK 483
           PG     ++GK
Sbjct: 66  PGISDQMKSGK 76


>emb|CAN83212.1| hypothetical protein VITISV_010891 [Vitis vinifera]
          Length = 138

 Score = 52.0 bits (123), Expect(2) = 9e-06
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = +1

Query: 343 TGEPLLKKHKLVSNLISPENDEIDDISGYHQNDQLEPGEGAYFETGK 483
           +GEP+LKKHKLVS+LISPENDE          D+ + G G  F+ GK
Sbjct: 79  SGEPVLKKHKLVSSLISPENDETSGTPRSQPEDKSDHGSGDQFKIGK 125



 Score = 22.3 bits (46), Expect(2) = 9e-06
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 248 TGPTTRIFSRYGSSGGEMMISI 313
           TG    +F R GSSGGE +  I
Sbjct: 47  TGSDWTLFYRGGSSGGETVALI 68


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