BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033637
         (1790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   679   0.0  
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   641   0.0  
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   639   0.0  
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-...   636   e-180
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   636   e-180

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  679 bits (1751), Expect = 0.0
 Identities = 349/518 (67%), Positives = 413/518 (79%), Gaps = 2/518 (0%)
 Frame = +2

Query: 2    MGVVTVSSSAA--RTPLGSSTRLSRHSSPTKRVSILQLKTDKTKNKALVSPKESVSSPID 175
            MGVVTVSSSA+  RTP G + + S H +P +R  +L  K DK KN ALV+P E +  PI+
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 176  NSKAKQKILTQVRKPSERVQALSTAEAPSCALDLNYNEAAAKLENIYKLSPAPELFDGED 355
             SK  +K L +  KPS+RV+A+ST E   C+++L+YNEAAAKLENIYKLSPA ++ + ED
Sbjct: 61   TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120

Query: 356  KDHGVKTVRRRRKKMIDGDDRAENGTVDNVVRSQKHNSKRLNLEKRIKLRMSKEVEVDSA 535
             +  V+  R+RRK++   DD+AE    DNVVR      KRL+LEKRI L   K+ +  ++
Sbjct: 121  LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180

Query: 536  AQRRKLHGDNELEKINKLIRGYSASTDLVSLDWKKMKIPPVLSSSEHTWLFKLMQPMKDI 715
             Q+++    NE E I+ L+R YSASTDLVSLDWKKMKIPPVL  SEH WLFKLMQPMK +
Sbjct: 181  IQKKR-DSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239

Query: 716  FSVKENLQNDLGREPTDGELAEATTMNVAQLRKQMEIGRAARNKLIRHNLRLVLFVMNKY 895
              VK+NLQ DLGREPTDGELAEA +M+  Q+R+ ME+G+AARNKLI+HNLRLVLFV+NKY
Sbjct: 240  LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299

Query: 896  FQEFANGPQFQDLCQAGVKGLITAIDRFEPKRKVRLSTYGLFWIRHVIIRSMTLSSFTRV 1075
            FQEFANGP+FQDLCQAGVKGLITAIDRFEPKR  RLSTYGLFWIRH I+RSMTLSSFTRV
Sbjct: 300  FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRV 359

Query: 1076 SFGLESVRADIQRAKLQLLFEMHRVPTEEEIIERVGISAERFHEVMKASKPVFSLHTRHS 1255
            SFGLESVR +IQRAKL+LLF++ R+PTEEEIIE+VGIS ER+HEVM+ASK V SLH RH+
Sbjct: 360  SFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHA 419

Query: 1256 VTQEEFISGITDVEGAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTL 1435
             TQEE+I+GITDVEG GGD+ RQ A             KPKESLV+RQRYGLDGKGDRTL
Sbjct: 420  TTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTL 479

Query: 1436 GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1549
            GEIAGNL+ISREMVRKHEVKALMKLKHPARVDYLR+YI
Sbjct: 480  GEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYI 517


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  641 bits (1654), Expect = 0.0
 Identities = 337/522 (64%), Positives = 402/522 (77%), Gaps = 5/522 (0%)
 Frame = +2

Query: 2    MGVVTVSSSAARTPLGSSTRLSRHSSPTKRVSILQLKTDKTKNKALVSPKESVSSPIDNS 181
            MGVVTVSS+AARTP     + S HSS  KR SI+  K DK  N  LVSP E V+ P++++
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 182  KAKQKILTQVRKPSERVQALSTAEAPSCALDLNYNEAAAKLENIYKLSPAPELFDGEDKD 361
              ++K      KP +RV+A+   EA  C+LDL+YNEAAAKLENI+KLSP  E  D E KD
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 362  HGVKTVRRRRKKMIDGDDRAENGTVDNVVRSQKHNSKRLNLEKRIKLRMSKEVEVDSAAQ 541
               K  ++R KK       + N   D +VR+Q    KRL+L+KRI L+  ++ + +   +
Sbjct: 121  GRSKRGQKRSKK-------SANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGK 173

Query: 542  -----RRKLHGDNELEKINKLIRGYSASTDLVSLDWKKMKIPPVLSSSEHTWLFKLMQPM 706
                 R++    NE ++I++L+R YSASTDLVSLDWKKMKIPPVL SSEHT LFKL+QPM
Sbjct: 174  AVPSLRKQKETKNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPM 233

Query: 707  KDIFSVKENLQNDLGREPTDGELAEATTMNVAQLRKQMEIGRAARNKLIRHNLRLVLFVM 886
            K +  V+E LQ  LGREPT+GELA AT MNV Q+R+Q+E+GRAARNKLI+HNLRLVLFV+
Sbjct: 234  KALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVI 293

Query: 887  NKYFQEFANGPQFQDLCQAGVKGLITAIDRFEPKRKVRLSTYGLFWIRHVIIRSMTLSSF 1066
            NKYF++FA+GP+FQDLCQAGVKGLITAIDRFEPKRK RLSTY LFWIRH IIRSMTLSSF
Sbjct: 294  NKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSF 353

Query: 1067 TRVSFGLESVRADIQRAKLQLLFEMHRVPTEEEIIERVGISAERFHEVMKASKPVFSLHT 1246
            TRVSFGL+SVR +IQRAKL+LL E+HR+PTE EI  +VGIS ER+ EVM+A+KPV+SLH+
Sbjct: 354  TRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHS 413

Query: 1247 RHSVTQEEFISGITDVEGAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGD 1426
            RHS T EE I+GITDVEG GGD RRQPA             KPKESLVIRQRYGLDGKG+
Sbjct: 414  RHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGN 473

Query: 1427 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIL 1552
            RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY++
Sbjct: 474  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI 515


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  639 bits (1649), Expect = 0.0
 Identities = 339/522 (64%), Positives = 402/522 (77%), Gaps = 5/522 (0%)
 Frame = +2

Query: 2    MGVVTVSSSAARTPLGSSTRLSRHSSPTKRVSILQLKTDKTKNKALVSPKESVSSPIDNS 181
            MGVVTVSS+AARTP     + S HSS  KR SI+  K DK  N  LVSP E V+ P++++
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 182  KAKQKILTQVRKPSERVQALSTAEAPSCALDLNYNEAAAKLENIYKLSPAPELFDGEDKD 361
              ++K      KP +RV+A+   EA  C+LDL+YNEAAAKLENI+KLSP  E  D E KD
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 362  HGVKTVRRRRKKMIDGDDRAENGTVDNVVRSQKHNSKRLNLEKRIKLRMSKEVEVDSAAQ 541
               K  ++R KK       + N   D +VR+Q    KRL+L+KRI L+  KE +  +  +
Sbjct: 121  GRSKRGQKRSKK-------SANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLR 173

Query: 542  RRKLHGDNELEKIN-----KLIRGYSASTDLVSLDWKKMKIPPVLSSSEHTWLFKLMQPM 706
            ++K    NE ++I+     +L+R YSASTDLVSLDWKKMKIPPVL SSEHT LFKL+QPM
Sbjct: 174  KQK-DTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPM 232

Query: 707  KDIFSVKENLQNDLGREPTDGELAEATTMNVAQLRKQMEIGRAARNKLIRHNLRLVLFVM 886
            K +  V+E LQ  LGREPT+GELA AT MNV Q+R+Q+E+GRAARNKLI+HNLRLVLFV+
Sbjct: 233  KALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVI 292

Query: 887  NKYFQEFANGPQFQDLCQAGVKGLITAIDRFEPKRKVRLSTYGLFWIRHVIIRSMTLSSF 1066
            NKYF++FA+GP+FQDLCQAGVKGLITAIDRFEPKRK RLSTY LFWIRH IIRSMTLSSF
Sbjct: 293  NKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSF 352

Query: 1067 TRVSFGLESVRADIQRAKLQLLFEMHRVPTEEEIIERVGISAERFHEVMKASKPVFSLHT 1246
            TRVSFGL+SVR +IQRAKL+LL E+HR+PTE EI  +VGIS ER+ EVM+A+KPV+SLH+
Sbjct: 353  TRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHS 412

Query: 1247 RHSVTQEEFISGITDVEGAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGD 1426
            RHS T EE I+GITDVEG GGD RRQPA             KPKESLVIRQRYGLDGKG+
Sbjct: 413  RHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGN 472

Query: 1427 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIL 1552
            RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY++
Sbjct: 473  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI 514


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 512

 Score =  636 bits (1641), Expect = e-180
 Identities = 326/517 (63%), Positives = 404/517 (78%)
 Frame = +2

Query: 2    MGVVTVSSSAARTPLGSSTRLSRHSSPTKRVSILQLKTDKTKNKALVSPKESVSSPIDNS 181
            MGV+TVS+SAARTPL  +TRL  H    KR  IL  K +K+    LVSP+E +  P++ +
Sbjct: 1    MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60

Query: 182  KAKQKILTQVRKPSERVQALSTAEAPSCALDLNYNEAAAKLENIYKLSPAPELFDGEDKD 361
            K  QK + +  +  +RV+A+ST E   C LD++YNEAAAKLENIYKLSP  +  + ED D
Sbjct: 61   KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID 120

Query: 362  HGVKTVRRRRKKMIDGDDRAENGTVDNVVRSQKHNSKRLNLEKRIKLRMSKEVEVDSAAQ 541
              ++ V RRRKK+    +  ++G  DNVVR+Q   +KRL+L+KRI L+ + + EV    Q
Sbjct: 121  SKIERVLRRRKKV---SEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQ 177

Query: 542  RRKLHGDNELEKINKLIRGYSASTDLVSLDWKKMKIPPVLSSSEHTWLFKLMQPMKDIFS 721
            +++ +  N ++ I+ LIR YSASTDLVS+DWKKMKIPPVL SSEH WLFKLMQPMK +  
Sbjct: 178  KKR-NVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQ 236

Query: 722  VKENLQNDLGREPTDGELAEATTMNVAQLRKQMEIGRAARNKLIRHNLRLVLFVMNKYFQ 901
             KE+L+ ++ +E T GELA+AT M++ Q+RK +E+GRAARNKLI+HNLRLVLFV+NKYFQ
Sbjct: 237  AKEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQ 295

Query: 902  EFANGPQFQDLCQAGVKGLITAIDRFEPKRKVRLSTYGLFWIRHVIIRSMTLSSFTRVSF 1081
            +FA+GP+FQDLCQAGVKGLITAIDRFEPKR+++LSTY LFWIRH I+RS+TLSSFTRV F
Sbjct: 296  DFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 355

Query: 1082 GLESVRADIQRAKLQLLFEMHRVPTEEEIIERVGISAERFHEVMKASKPVFSLHTRHSVT 1261
            GLE VR DIQR KL+L FE+ R PTEEE++ER+GIS ER+HEVMKASKP+ SLH+RH  T
Sbjct: 356  GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITT 415

Query: 1262 QEEFISGITDVEGAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1441
            QEE+I+GITDV+G  GD RRQ A             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 416  QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 475

Query: 1442 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIL 1552
            IAGNLNISRE+VRKHEVKALMKLKHPAR+DYLRRY++
Sbjct: 476  IAGNLNISREIVRKHEVKALMKLKHPARLDYLRRYVV 512


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  636 bits (1641), Expect = e-180
 Identities = 332/517 (64%), Positives = 405/517 (78%)
 Frame = +2

Query: 2    MGVVTVSSSAARTPLGSSTRLSRHSSPTKRVSILQLKTDKTKNKALVSPKESVSSPIDNS 181
            MGVVT SSSAARTPLG S + S + S  KR  ++  K DK  +  LV P+E    PI+ S
Sbjct: 1    MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60

Query: 182  KAKQKILTQVRKPSERVQALSTAEAPSCALDLNYNEAAAKLENIYKLSPAPELFDGEDKD 361
            K K++            +  +  E  S  L+++YNEAAAKLENIYKLSPA +  D  D +
Sbjct: 61   KGKKR------------RGKTNREVSSGTLEVDYNEAAAKLENIYKLSPATDTSD-VDIN 107

Query: 362  HGVKTVRRRRKKMIDGDDRAENGTVDNVVRSQKHNSKRLNLEKRIKLRMSKEVEVDSAAQ 541
              ++  R+R++K  +GD++AEN T   +VR++   +KRL+L+KRI L+ ++E EV    +
Sbjct: 108  GLIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIR 167

Query: 542  RRKLHGDNELEKINKLIRGYSASTDLVSLDWKKMKIPPVLSSSEHTWLFKLMQPMKDIFS 721
            ++K   D+  EKI +L+R YSAST+LVSLDW+KMKIPPVL S+EH WLFKLMQPMK +  
Sbjct: 168  KKKDSKDDN-EKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLP 226

Query: 722  VKENLQNDLGREPTDGELAEATTMNVAQLRKQMEIGRAARNKLIRHNLRLVLFVMNKYFQ 901
            VK +LQ +LGR+PTDGELAEAT MNV ++RKQ+E+GRAARNKLI+HNLRLV+FVMNKYFQ
Sbjct: 227  VKADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQ 286

Query: 902  EFANGPQFQDLCQAGVKGLITAIDRFEPKRKVRLSTYGLFWIRHVIIRSMTLSSFTRVSF 1081
            +FANGP+FQDLCQAGVKGLITAIDRFEP+R+ +LSTY LFWIRH IIRSMTLSSFT+VSF
Sbjct: 287  DFANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSF 346

Query: 1082 GLESVRADIQRAKLQLLFEMHRVPTEEEIIERVGISAERFHEVMKASKPVFSLHTRHSVT 1261
            GLESVR +IQ+AKL+LL E+ R PTEEEIIERVGISAER+HEV++A+KP  SLH RH+VT
Sbjct: 347  GLESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVT 406

Query: 1262 QEEFISGITDVEGAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1441
            QEEFI+GITD++  GGD RRQPA             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 407  QEEFINGITDID--GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 464

Query: 1442 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIL 1552
            IAGNLNISREMVRK+EVKALMKLKHPARVDYLRRY++
Sbjct: 465  IAGNLNISREMVRKYEVKALMKLKHPARVDYLRRYVV 501