BLASTX nr result

ID: Panax21_contig00033634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033634
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW61352.1| hypothetical protein ZEAMMB73_404625 [Zea mays]         75   1e-11
ref|XP_002318273.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_002304442.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|NP_001140867.1| uncharacterized protein LOC100272943 [Zea ma...    74   3e-11
ref|XP_002268693.2| PREDICTED: uncharacterized protein LOC100254...    73   4e-11

>gb|AFW61352.1| hypothetical protein ZEAMMB73_404625 [Zea mays]
          Length = 298

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 36/63 (57%), Positives = 46/63 (73%)
 Frame = +1

Query: 247 LRFQGHFQILSLNGSFRPIENGGTSNRCEWLSVSLTGPDGCVIGGGVDGQLIAGYPVQV* 426
           L ++G F++LSL+GSF P ENGGT +R   +SVSL  PDG V+GGGV G L+A  PVQV 
Sbjct: 231 LTYEGRFELLSLSGSFMPTENGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVC 290

Query: 427 LIF 435
           + F
Sbjct: 291 ICF 293


>ref|XP_002318273.1| predicted protein [Populus trichocarpa] gi|222858946|gb|EEE96493.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 36/59 (61%), Positives = 44/59 (74%)
 Frame = +1

Query: 247 LRFQGHFQILSLNGSFRPIENGGTSNRCEWLSVSLTGPDGCVIGGGVDGQLIAGYPVQV 423
           L ++G F+ILSL+GSF P ENGGT  R   +SVSL GPDG V+GGG+ G L+A  PVQV
Sbjct: 215 LTYEGRFEILSLSGSFMPSENGGTKGRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQV 273


>ref|XP_002304442.1| predicted protein [Populus trichocarpa] gi|222841874|gb|EEE79421.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 40/76 (52%), Positives = 51/76 (67%)
 Frame = +1

Query: 247 LRFQGHFQILSLNGSFRPIENGGTSNRCEWLSVSLTGPDGCVIGGGVDGQLIAGYPVQV* 426
           L ++G F+ILSL+GSF P E GGT +R   +SVSL  PDG V+GGGV G L+A  PVQV 
Sbjct: 200 LTYEGRFEILSLSGSFMPTETGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVV 259

Query: 427 LIFSSKLQFLTGSLGE 474
           ++ S    FL G+  E
Sbjct: 260 VVGS----FLAGNQHE 271


>ref|NP_001140867.1| uncharacterized protein LOC100272943 [Zea mays]
           gi|194701518|gb|ACF84843.1| unknown [Zea mays]
           gi|195609746|gb|ACG26703.1| DNA-binding protein [Zea
           mays] gi|413921421|gb|AFW61353.1| DNA-binding protein
           [Zea mays]
          Length = 391

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/59 (57%), Positives = 44/59 (74%)
 Frame = +1

Query: 247 LRFQGHFQILSLNGSFRPIENGGTSNRCEWLSVSLTGPDGCVIGGGVDGQLIAGYPVQV 423
           L ++G F++LSL+GSF P ENGGT +R   +SVSL  PDG V+GGGV G L+A  PVQ+
Sbjct: 231 LTYEGRFELLSLSGSFMPTENGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQI 289


>ref|XP_002268693.2| PREDICTED: uncharacterized protein LOC100254941 [Vitis vinifera]
          Length = 327

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 35/59 (59%), Positives = 45/59 (76%)
 Frame = +1

Query: 247 LRFQGHFQILSLNGSFRPIENGGTSNRCEWLSVSLTGPDGCVIGGGVDGQLIAGYPVQV 423
           L ++G F+ILSL+GSF P E+GGT +R   +SVSL GPDG V+GGG+ G L+A  PVQV
Sbjct: 178 LTYEGRFEILSLSGSFMPSESGGTKSRSGGMSVSLAGPDGRVLGGGLAGLLVAAGPVQV 236


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