BLASTX nr result

ID: Panax21_contig00033628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033628
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16835.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002285352.1| PREDICTED: T-complex protein 1 subunit epsil...   103   1e-20
ref|XP_003601873.1| T-complex protein 1 subunit epsilon [Medicag...   102   4e-20
ref|XP_003574361.1| PREDICTED: T-complex protein 1 subunit epsil...   101   6e-20
ref|XP_004171246.1| PREDICTED: T-complex protein 1 subunit epsil...   100   9e-20

>emb|CBI16835.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/56 (82%), Positives = 52/56 (92%)
 Frame = +1

Query: 1   MSHPQMPMQIEDANIASLTCPFDPPKPKTKHQVDIDTMEKFQTIRQK*QKYFDDMI 168
           MSHPQMP QIEDA IA LTCPF+PPKPKTKH+VDIDT+EKFQT+RQ+ QKYFDDM+
Sbjct: 175 MSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMV 230


>ref|XP_002285352.1| PREDICTED: T-complex protein 1 subunit epsilon [Vitis vinifera]
          Length = 535

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/56 (82%), Positives = 52/56 (92%)
 Frame = +1

Query: 1   MSHPQMPMQIEDANIASLTCPFDPPKPKTKHQVDIDTMEKFQTIRQK*QKYFDDMI 168
           MSHPQMP QIEDA IA LTCPF+PPKPKTKH+VDIDT+EKFQT+RQ+ QKYFDDM+
Sbjct: 230 MSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMV 285


>ref|XP_003601873.1| T-complex protein 1 subunit epsilon [Medicago truncatula]
           gi|355490921|gb|AES72124.1| T-complex protein 1 subunit
           epsilon [Medicago truncatula]
           gi|388504082|gb|AFK40107.1| unknown [Medicago
           truncatula]
          Length = 535

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/56 (80%), Positives = 52/56 (92%)
 Frame = +1

Query: 1   MSHPQMPMQIEDANIASLTCPFDPPKPKTKHQVDIDTMEKFQTIRQK*QKYFDDMI 168
           MSHPQMP QIEDA IA LTCPF+PPKPKTKH+VDIDT+EKFQT+R++ QKYFDDM+
Sbjct: 230 MSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRKQEQKYFDDMV 285


>ref|XP_003574361.1| PREDICTED: T-complex protein 1 subunit epsilon-like [Brachypodium
           distachyon]
          Length = 535

 Score =  101 bits (252), Expect = 6e-20
 Identities = 44/56 (78%), Positives = 53/56 (94%)
 Frame = +1

Query: 1   MSHPQMPMQIEDANIASLTCPFDPPKPKTKHQVDIDTMEKFQTIRQK*QKYFDDMI 168
           MSHPQMP +IEDANIA LTCPF+PPKPKTKH+VDIDT+EKFQT+R++ QKYFD+M+
Sbjct: 230 MSHPQMPKRIEDANIAILTCPFEPPKPKTKHKVDIDTVEKFQTLREQEQKYFDEMV 285


>ref|XP_004171246.1| PREDICTED: T-complex protein 1 subunit epsilon-like [Cucumis
           sativus]
          Length = 535

 Score =  100 bits (250), Expect = 9e-20
 Identities = 45/56 (80%), Positives = 51/56 (91%)
 Frame = +1

Query: 1   MSHPQMPMQIEDANIASLTCPFDPPKPKTKHQVDIDTMEKFQTIRQK*QKYFDDMI 168
           MSHPQMP QIEDA IA LTCPF+PPKPKTKH+VDIDT+EKFQT+R + QKYFDDM+
Sbjct: 230 MSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMV 285


Top