BLASTX nr result

ID: Panax21_contig00033623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033623
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533802.1| cellular nucleic acid binding protein, putat...    97   1e-18
ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like [G...    90   2e-16
ref|XP_003520240.1| PREDICTED: DNA-binding protein HEXBP-like [G...    90   2e-16
ref|XP_003540832.1| PREDICTED: glycine-rich protein 2b-like [Gly...    88   6e-16
emb|CBI37898.3| unnamed protein product [Vitis vinifera]               88   8e-16

>ref|XP_002533802.1| cellular nucleic acid binding protein, putative [Ricinus communis]
           gi|223526275|gb|EEF28589.1| cellular nucleic acid
           binding protein, putative [Ricinus communis]
          Length = 266

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/84 (63%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
 Frame = +3

Query: 144 SMAEEN--IRSRGVVARFNDQKGYGFIKPDDGGDDLFVHHTEIKSDG-YRTLHADQVVEF 314
           SMAEE   +RSRG V RF+D+KG+GFIKPDDGG+DLFVHH+ IKSDG YR+L  D VVEF
Sbjct: 4   SMAEEQTGVRSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEF 63

Query: 315 YVEFDSSTNKTKAVDVTGINGSSL 386
            V   S  NK +AVDVT   G  +
Sbjct: 64  TVSL-SDDNKYQAVDVTAPGGGPI 86


>ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max]
          Length = 250

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/80 (60%), Positives = 58/80 (72%)
 Frame = +3

Query: 147 MAEENIRSRGVVARFNDQKGYGFIKPDDGGDDLFVHHTEIKSDGYRTLHADQVVEFYVEF 326
           MAEE  R  GVV  FN+ KG+GFIKPDDGG+DLFVH + I+SDGYRTL     VEF +  
Sbjct: 1   MAEE--RFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIA- 57

Query: 327 DSSTNKTKAVDVTGINGSSL 386
               +KTKAVDVTG++G+ L
Sbjct: 58  TGDNDKTKAVDVTGVDGAPL 77


>ref|XP_003520240.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max]
          Length = 252

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/80 (60%), Positives = 58/80 (72%)
 Frame = +3

Query: 147 MAEENIRSRGVVARFNDQKGYGFIKPDDGGDDLFVHHTEIKSDGYRTLHADQVVEFYVEF 326
           MAEE  R  GVV  FN+ KG+GFIKPDDGG+DLFVH + I+SDGYRTL     VEF +  
Sbjct: 1   MAEE--RFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIA- 57

Query: 327 DSSTNKTKAVDVTGINGSSL 386
               +KTKAVDVTG++G+ L
Sbjct: 58  TGDNDKTKAVDVTGVDGAPL 77


>ref|XP_003540832.1| PREDICTED: glycine-rich protein 2b-like [Glycine max]
          Length = 200

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/78 (56%), Positives = 56/78 (71%)
 Frame = +3

Query: 165 RSRGVVARFNDQKGYGFIKPDDGGDDLFVHHTEIKSDGYRTLHADQVVEFYVEFDSSTNK 344
           R  G V  FNDQKG+GFI PDDG DDLFVH ++IKSDG+R+L   + VEF +E +S   +
Sbjct: 4   RVSGKVKWFNDQKGFGFISPDDGSDDLFVHQSQIKSDGFRSLAEGESVEFAIESESD-GR 62

Query: 345 TKAVDVTGINGSSLDKVR 398
            KAVDVTG +G+S+   R
Sbjct: 63  AKAVDVTGPDGASVQGTR 80


>emb|CBI37898.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/78 (56%), Positives = 55/78 (70%)
 Frame = +3

Query: 165 RSRGVVARFNDQKGYGFIKPDDGGDDLFVHHTEIKSDGYRTLHADQVVEFYVEFDSSTNK 344
           R  G V  FNDQKG+GFI PDDGGDDLFVH + I+S+G+R+L   + VEF VE  S   +
Sbjct: 3   RVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVE-SSDDGR 61

Query: 345 TKAVDVTGINGSSLDKVR 398
           TKAVDVTG +G+ +   R
Sbjct: 62  TKAVDVTGPDGNPVQGSR 79


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