BLASTX nr result

ID: Panax21_contig00033612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033612
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67951.1| hypothetical protein VITISV_012636 [Vitis vinifera]    71   8e-11
ref|XP_003634167.1| PREDICTED: golgin candidate 5-like isoform 2...    71   1e-10
emb|CBI23126.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002267350.1| PREDICTED: golgin candidate 5-like isoform 1...    71   1e-10

>emb|CAN67951.1| hypothetical protein VITISV_012636 [Vitis vinifera]
          Length = 571

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = +3

Query: 6   SKPNVEHAERSDSSNCLQQQECSETVFYEDSGSPEAKSSI-HVDEDDSNITVPHELHNVI 182
           S+  VE  E  DSSN +QQ+  S +V        EA S    +D+ + +I +P E H V 
Sbjct: 142 SESTVESVESMDSSNXIQQEASSHSV--------EANSQADEIDQVEGSIIIPDESHKVA 193

Query: 183 HQGEITDAQKTQEKETIEKVSPIQAEDAPIDVQTASGVEPPSSNSPTSDETEGAEENSKS 362
              E T  QKT   E ++K+ PIQ E A ID +   G E  +S+S T  ETE A E S+ 
Sbjct: 194 DLHESTGEQKTGVNEIVDKILPIQTE-ASIDSKAGIGTELSASHSATIKETESAGELSED 252

Query: 363 PLPVEEP 383
            LP   P
Sbjct: 253 HLPTTLP 259


>ref|XP_003634167.1| PREDICTED: golgin candidate 5-like isoform 2 [Vitis vinifera]
          Length = 988

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = +3

Query: 6   SKPNVEHAERSDSSNCLQQQECSETVFYEDSGSPEAKSSI-HVDEDDSNITVPHELHNVI 182
           S+  VE  E  DSSN +QQ+  S +V        EA S    +D+ + +I +P E H V 
Sbjct: 183 SESTVESVESMDSSNYIQQEASSHSV--------EANSQADEIDQVEGSIIIPDESHKVA 234

Query: 183 HQGEITDAQKTQEKETIEKVSPIQAEDAPIDVQTASGVEPPSSNSPTSDETEGAEENSKS 362
              E T  QKT   E ++K+ PIQ E A ID +   G E  +S+S T  ETE A E S+ 
Sbjct: 235 DLHESTGEQKTGVNEIVDKILPIQTE-ASIDSKAGIGTELSASHSATIKETESAGELSED 293

Query: 363 PLPVEEP 383
            LP   P
Sbjct: 294 HLPTTLP 300


>emb|CBI23126.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = +3

Query: 6   SKPNVEHAERSDSSNCLQQQECSETVFYEDSGSPEAKSSI-HVDEDDSNITVPHELHNVI 182
           S+  VE  E  DSSN +QQ+  S +V        EA S    +D+ + +I +P E H V 
Sbjct: 136 SESTVESVESMDSSNYIQQEASSHSV--------EANSQADEIDQVEGSIIIPDESHKVA 187

Query: 183 HQGEITDAQKTQEKETIEKVSPIQAEDAPIDVQTASGVEPPSSNSPTSDETEGAEENSKS 362
              E T  QKT   E ++K+ PIQ E A ID +   G E  +S+S T  ETE A E S+ 
Sbjct: 188 DLHESTGEQKTGVNEIVDKILPIQTE-ASIDSKAGIGTELSASHSATIKETESAGELSED 246

Query: 363 PLPVEEP 383
            LP   P
Sbjct: 247 HLPTTLP 253


>ref|XP_002267350.1| PREDICTED: golgin candidate 5-like isoform 1 [Vitis vinifera]
          Length = 978

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = +3

Query: 6   SKPNVEHAERSDSSNCLQQQECSETVFYEDSGSPEAKSSI-HVDEDDSNITVPHELHNVI 182
           S+  VE  E  DSSN +QQ+  S +V        EA S    +D+ + +I +P E H V 
Sbjct: 183 SESTVESVESMDSSNYIQQEASSHSV--------EANSQADEIDQVEGSIIIPDESHKVA 234

Query: 183 HQGEITDAQKTQEKETIEKVSPIQAEDAPIDVQTASGVEPPSSNSPTSDETEGAEENSKS 362
              E T  QKT   E ++K+ PIQ E A ID +   G E  +S+S T  ETE A E S+ 
Sbjct: 235 DLHESTGEQKTGVNEIVDKILPIQTE-ASIDSKAGIGTELSASHSATIKETESAGELSED 293

Query: 363 PLPVEEP 383
            LP   P
Sbjct: 294 HLPTTLP 300


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