BLASTX nr result

ID: Panax21_contig00033602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033602
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305959.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002279543.2| PREDICTED: uncharacterized protein LOC100253...    61   8e-08
emb|CAN63828.1| hypothetical protein VITISV_006636 [Vitis vinifera]    61   8e-08

>ref|XP_002305959.1| predicted protein [Populus trichocarpa] gi|222848923|gb|EEE86470.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
 Frame = -1

Query: 436 GRDRPGSQPKSLLPLCDGKTRSLSFQG-------VFHTLXXXXXXXXXXS------FNED 296
           GRD  G + +SLLP+ DGK+RS SFQ        +FHTL                 F+E+
Sbjct: 525 GRDGKGLRSESLLPVYDGKSRSYSFQSARKESVTIFHTLSNTSSGESSKEKDSDRDFHEE 584

Query: 295 KDCAFKGK----TPIEAGSCSEDESYETEYQSSPFESASGSKGFINPLFMDAEIKND 137
              + KGK     P+E  S S+D+ +E  Y  S  E  S SKG+ NP FM+ E+  +
Sbjct: 585 NQSSAKGKGKARAPVETESSSDDDIFEKGYHRSSSEPTSSSKGYANPFFMEQELTEE 641


>ref|XP_002279543.2| PREDICTED: uncharacterized protein LOC100253124 [Vitis vinifera]
          Length = 647

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
 Frame = -1

Query: 436 GRDRPGSQPKSLLPLCDGKTRSLSFQG-------VFHTLXXXXXXXXXXSFN------ED 296
           GRD  G   K+LLPL DGKTRS SFQG       +FHT+                   ED
Sbjct: 523 GRDVTGLHRKTLLPLYDGKTRSYSFQGAKKESVTIFHTVSDASSGESYSDREISWHSFED 582

Query: 295 KDCA------FKGKTPIEAGSCSEDESYETEYQSSPFESASGSKGFINPLFMD 155
           K+ A       K K PI  GS S+D   + +Y  S  E AS S   ++PLFM+
Sbjct: 583 KESAAKAKAKAKAKAPIADGSSSDDRICKEDYLGSSSEPASSSTSSMSPLFME 635


>emb|CAN63828.1| hypothetical protein VITISV_006636 [Vitis vinifera]
          Length = 1017

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
 Frame = -1

Query: 436  GRDRPGSQPKSLLPLCDGKTRSLSFQG-------VFHTLXXXXXXXXXXSFN------ED 296
            GRD  G   K+LLPL DGKTRS SFQG       +FHT+                   ED
Sbjct: 684  GRDVTGLHRKTLLPLYDGKTRSYSFQGAKKESVTIFHTVSDASSGESYSDREISWHSFED 743

Query: 295  KDCA------FKGKTPIEAGSCSEDESYETEYQSSPFESASGSKGFINPLFMD 155
            K+ A       K K PI  GS S+D   + +Y  S  E AS S   ++PLFM+
Sbjct: 744  KESAAKAKAKAKAKAPIADGSSSDDRICKEDYLGSSSEPASSSTSSMSPLFME 796


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