BLASTX nr result

ID: Panax21_contig00033577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033577
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi...   301   7e-80
ref|XP_002525469.1| pentatricopeptide repeat-containing protein,...   296   1e-78
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   294   7e-78
ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containi...   275   4e-72
ref|XP_002871645.1| pentatricopeptide repeat-containing protein ...   274   7e-72

>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Vitis vinifera]
          Length = 566

 Score =  301 bits (770), Expect = 7e-80
 Identities = 141/197 (71%), Positives = 168/197 (85%)
 Frame = -3

Query: 591 SFNIILNGWCNIIGNSREAKRIWREMTERRIFKDVVSFASMISCYSKVGRINDVLKLFNQ 412
           SFNIILNGWCN+IG+ REA+R WREM+ R I +DVVS++S+ISCYSKV  +N VLKLFNQ
Sbjct: 256 SFNIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQ 315

Query: 411 MKALEIVPDRKVYNAVIHTLAKGRLVKEACNLLKTMEEKGIAPNAVTYNSLIMPLCKARK 232
           MK +EI PDRKVYNAV+H LAK   VKEA NL+K ME KGIAP++VTYNSLI PL +ARK
Sbjct: 316 MKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARK 375

Query: 231 LDEAQEVFDEMLERGLHPTVRTYHAFFRILRTAEEVFALLENMNTKGCRPGHDTFIMLIR 52
           ++EA+EVFDEML+RGL PT+RTYHAFFRIL++ EEVF LLE M   GC P  DT+IMLIR
Sbjct: 376 INEAKEVFDEMLQRGLSPTIRTYHAFFRILKSGEEVFMLLEKMKETGCHPDKDTYIMLIR 435

Query: 51  KFCRWRQLDNVYKLWTK 1
           +FCRWRQLDNV+KLW++
Sbjct: 436 RFCRWRQLDNVFKLWSE 452


>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  296 bits (759), Expect = 1e-78
 Identities = 141/197 (71%), Positives = 163/197 (82%)
 Frame = -3

Query: 591 SFNIILNGWCNIIGNSREAKRIWREMTERRIFKDVVSFASMISCYSKVGRINDVLKLFNQ 412
           SFNI+LNGWCN+IG+ REA RIWREM +RRI  DVVS+AS+ISCYSK G +  V KL+NQ
Sbjct: 270 SFNIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQ 329

Query: 411 MKALEIVPDRKVYNAVIHTLAKGRLVKEACNLLKTMEEKGIAPNAVTYNSLIMPLCKARK 232
           MK + I PDRK+YN+VI  LAKGR V EA NL+KTMEEKGIAPN VTYNSLI PLC+ARK
Sbjct: 330 MKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARK 389

Query: 231 LDEAQEVFDEMLERGLHPTVRTYHAFFRILRTAEEVFALLENMNTKGCRPGHDTFIMLIR 52
           +DEA+ +FDEML+ G  PT+RTYHAFFR LRT EEVFALLENM   GC P  DT+IMLIR
Sbjct: 390 IDEARGLFDEMLQHGHSPTIRTYHAFFRSLRTGEEVFALLENMRKLGCHPTIDTYIMLIR 449

Query: 51  KFCRWRQLDNVYKLWTK 1
           KFCRWRQ D+V+KLW +
Sbjct: 450 KFCRWRQFDDVFKLWNQ 466


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  294 bits (753), Expect = 7e-78
 Identities = 138/195 (70%), Positives = 167/195 (85%)
 Frame = -3

Query: 591 SFNIILNGWCNIIGNSREAKRIWREMTERRIFKDVVSFASMISCYSKVGRINDVLKLFNQ 412
           SFNI+LNGWCN+IG+ RE++R+WREM++R I  DVVS+ASM+SCYSK G +  VL+L+ Q
Sbjct: 198 SFNIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQ 257

Query: 411 MKALEIVPDRKVYNAVIHTLAKGRLVKEACNLLKTMEEKGIAPNAVTYNSLIMPLCKARK 232
           MK + I PDRKVYNAVIH LAKGRLV EA NL+KTMEEKG+APN VTYNSLI PLC+ARK
Sbjct: 258 MKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARK 317

Query: 231 LDEAQEVFDEMLERGLHPTVRTYHAFFRILRTAEEVFALLENMNTKGCRPGHDTFIMLIR 52
           ++EA+  FD+ML+R + PT+RTYHAF RILRT EEVFALLE M   GC+P +DT+IMLIR
Sbjct: 318 VEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVFALLEKMRKMGCQPINDTYIMLIR 377

Query: 51  KFCRWRQLDNVYKLW 7
           KFCRWRQL+NV+KLW
Sbjct: 378 KFCRWRQLENVFKLW 392


>ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
           gi|449477985|ref|XP_004155184.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
          Length = 485

 Score =  275 bits (703), Expect = 4e-72
 Identities = 130/195 (66%), Positives = 159/195 (81%)
 Frame = -3

Query: 591 SFNIILNGWCNIIGNSREAKRIWREMTERRIFKDVVSFASMISCYSKVGRINDVLKLFNQ 412
           SFNIILNGWC +IG+ R+ +R+W+EMT R I  D VS+AS ISCYSKV  ++ VL+LF  
Sbjct: 186 SFNIILNGWC-VIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFED 244

Query: 411 MKALEIVPDRKVYNAVIHTLAKGRLVKEACNLLKTMEEKGIAPNAVTYNSLIMPLCKARK 232
           MK ++I PDRKVYNAVIH+LAKGR +KEA +L+KTMEEKGI  N VTYNS+I PLCKAR+
Sbjct: 245 MKRMKIDPDRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARR 304

Query: 231 LDEAQEVFDEMLERGLHPTVRTYHAFFRILRTAEEVFALLENMNTKGCRPGHDTFIMLIR 52
            DEA+ VF+E+L+RGL PT++TYHAF R LRT EE+F LL+ M T GC P  DT+IMLIR
Sbjct: 305 FDEARAVFEELLQRGLCPTIQTYHAFLRFLRTEEEIFELLKKMRTMGCNPTTDTYIMLIR 364

Query: 51  KFCRWRQLDNVYKLW 7
           KFCRWRQLDNV ++W
Sbjct: 365 KFCRWRQLDNVSRIW 379


>ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317482|gb|EFH47904.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 524

 Score =  274 bits (701), Expect = 7e-72
 Identities = 134/198 (67%), Positives = 155/198 (78%), Gaps = 1/198 (0%)
 Frame = -3

Query: 591 SFNIILNGWCNIIGNSREAKRIWREMTERRIFKDVVSFASMISCYSKVGRINDVLKLFNQ 412
           SFNI+LNGWCN+IG+ REA+R+W EM    +  DVVS++SMISCYSK G +N VLKLF++
Sbjct: 217 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 276

Query: 411 MKALEIVPDRKVYNAVIHTLAKGRLVKEACNLLKTMEE-KGIAPNAVTYNSLIMPLCKAR 235
           MK   I PDRKVYNAVIH LAK   V EA NL+KTMEE KG+ PN VTYNSLI PLCKAR
Sbjct: 277 MKKESIEPDRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKAR 336

Query: 234 KLDEAQEVFDEMLERGLHPTVRTYHAFFRILRTAEEVFALLENMNTKGCRPGHDTFIMLI 55
           K +EA++VFDEMLE+GL PT+RTYHAF RILRT EEVF LL  M   GC+P  DT+IMLI
Sbjct: 337 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCQPTVDTYIMLI 396

Query: 54  RKFCRWRQLDNVYKLWTK 1
           RK CRWR  DNV  LW +
Sbjct: 397 RKLCRWRDFDNVLLLWNE 414


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