BLASTX nr result

ID: Panax21_contig00033562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033562
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148182.1| PREDICTED: omega-3 fatty acid desaturase, ch...   182   3e-44
ref|XP_002277573.1| PREDICTED: temperature-sensitive omega-3 fat...   181   5e-44
gb|ABG88130.2| ER-type omega-3 fatty acid desaturase [Olea europ...   181   7e-44
ref|XP_002298309.1| predicted protein [Populus trichocarpa] gi|2...   180   9e-44
gb|ABD48788.1| endoplasmic reticulum 18:2 desaturase [Populus to...   180   1e-43

>ref|XP_004148182.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like
           [Cucumis sativus] gi|449507795|ref|XP_004163131.1|
           PREDICTED: omega-3 fatty acid desaturase,
           chloroplastic-like [Cucumis sativus]
           gi|190613766|gb|ACE80931.1| omega-3 fatty acid
           desaturase [Cucumis sativus]
          Length = 445

 Score =  182 bits (461), Expect = 3e-44
 Identities = 72/111 (64%), Positives = 95/111 (85%)
 Frame = -2

Query: 335 NEAAFDPSAPPPFRIAEIRAAIPLHCWVKNPWRSLGYVIRDFLAAFGLVAMAMYIDNWIF 156
           +E +FDP+APPPFR+A+IRAAIP HCWV++PWRS+ YV+RD +  FGL A+A Y +NW+ 
Sbjct: 91  DEGSFDPAAPPPFRLADIRAAIPKHCWVRDPWRSMSYVVRDVVVVFGLAAVAAYFNNWVV 150

Query: 155 WPLYWTAQGSIFMGLFVIGHDCGHGSFSDNPNLNNIVGHVLLTFVLTPYHG 3
           WPLYW AQG++F  LFV+GHDCGHGSFS++PNLN++VGH+L + +L PYHG
Sbjct: 151 WPLYWFAQGTMFWALFVLGHDCGHGSFSNDPNLNSVVGHILHSSILVPYHG 201


>ref|XP_002277573.1| PREDICTED: temperature-sensitive omega-3 fatty acid desaturase,
           chloroplastic-like [Vitis vinifera]
          Length = 386

 Score =  181 bits (459), Expect = 5e-44
 Identities = 74/107 (69%), Positives = 91/107 (85%)
 Frame = -2

Query: 323 FDPSAPPPFRIAEIRAAIPLHCWVKNPWRSLGYVIRDFLAAFGLVAMAMYIDNWIFWPLY 144
           FDPSAPPPFRIA+IRAAIP HCWVK+PW+S+ YV+RD +  FGL   A+Y D+W+ WPLY
Sbjct: 28  FDPSAPPPFRIADIRAAIPKHCWVKDPWKSMSYVLRDVVVVFGLAVAAIYSDSWLVWPLY 87

Query: 143 WTAQGSIFMGLFVIGHDCGHGSFSDNPNLNNIVGHVLLTFVLTPYHG 3
           W AQG++F  LFV+GHDCGHGSFSDNP LN+IVGH+L +++L PYHG
Sbjct: 88  WAAQGTMFWALFVLGHDCGHGSFSDNPKLNSIVGHLLHSWILVPYHG 134


>gb|ABG88130.2| ER-type omega-3 fatty acid desaturase [Olea europaea]
          Length = 395

 Score =  181 bits (458), Expect = 7e-44
 Identities = 75/111 (67%), Positives = 91/111 (81%)
 Frame = -2

Query: 335 NEAAFDPSAPPPFRIAEIRAAIPLHCWVKNPWRSLGYVIRDFLAAFGLVAMAMYIDNWIF 156
           +E  FDPS PPPF+I +IRAAIP HCWVK+PWRS  YV+RD   A GLV MA++ ++WI 
Sbjct: 41  DEIDFDPSEPPPFKIGDIRAAIPEHCWVKDPWRSCSYVVRDIAVALGLVGMALHFNSWIH 100

Query: 155 WPLYWTAQGSIFMGLFVIGHDCGHGSFSDNPNLNNIVGHVLLTFVLTPYHG 3
           WP+YW AQG+IF  +FV+GHDCGHGSFSDNPNLNNIVGH+L + +L PYHG
Sbjct: 101 WPVYWFAQGTIFWAIFVLGHDCGHGSFSDNPNLNNIVGHILHSSILVPYHG 151


>ref|XP_002298309.1| predicted protein [Populus trichocarpa] gi|222845567|gb|EEE83114.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  180 bits (457), Expect = 9e-44
 Identities = 76/110 (69%), Positives = 90/110 (81%)
 Frame = -2

Query: 332 EAAFDPSAPPPFRIAEIRAAIPLHCWVKNPWRSLGYVIRDFLAAFGLVAMAMYIDNWIFW 153
           E  FDPSAPPPF+IAEIRAAIP HCWVKNPWRSL YV+RD    F L A A+ +D+W+FW
Sbjct: 25  EGDFDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDVTVVFALAAAALRLDSWVFW 84

Query: 152 PLYWTAQGSIFMGLFVIGHDCGHGSFSDNPNLNNIVGHVLLTFVLTPYHG 3
           PLYW AQG++F  +FV+GHDCGHGSFS+N  LNN+VGHVL + +L PYHG
Sbjct: 85  PLYWAAQGTMFWAIFVLGHDCGHGSFSNNHLLNNVVGHVLHSSILVPYHG 134


>gb|ABD48788.1| endoplasmic reticulum 18:2 desaturase [Populus tomentosa]
          Length = 383

 Score =  180 bits (456), Expect = 1e-43
 Identities = 76/110 (69%), Positives = 90/110 (81%)
 Frame = -2

Query: 332 EAAFDPSAPPPFRIAEIRAAIPLHCWVKNPWRSLGYVIRDFLAAFGLVAMAMYIDNWIFW 153
           E  FDPSAPPPF+IAEIRAAIP HCWVKNPWRSL YV+RD    F L A A+ +D+WIFW
Sbjct: 25  EGDFDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDVAIVFALAAAALRLDSWIFW 84

Query: 152 PLYWTAQGSIFMGLFVIGHDCGHGSFSDNPNLNNIVGHVLLTFVLTPYHG 3
           PLYW AQG++F  +FV+GHDCGHGSFS+N  LNN+VGH+L + +L PYHG
Sbjct: 85  PLYWAAQGTMFWAIFVLGHDCGHGSFSNNHLLNNVVGHILHSSILVPYHG 134


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