BLASTX nr result
ID: Panax21_contig00033559
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033559 (514 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003591979.1| Pentatricopeptide repeat-containing protein ... 81 8e-14 ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi... 79 5e-13 ref|NP_190938.1| pentatricopeptide repeat-containing protein [Ar... 73 2e-11 ref|XP_002885504.1| pentatricopeptide repeat-containing protein ... 73 2e-11 ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arab... 73 2e-11 >ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 873 Score = 81.3 bits (199), Expect = 8e-14 Identities = 47/159 (29%), Positives = 80/159 (50%) Frame = +1 Query: 19 GYKKTEFLKEGRRIIFQLNSEGSVPEIMAYETYFRSLCNVGRLDEAEVLLKKMMKSRTVP 198 GY K ++LKE +I + +G +P++ Y T R LC+ G++DEA L KM + VP Sbjct: 290 GYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVP 349 Query: 199 ELCVYGSFIRALFLAARDEDAIRFFNVERKKGLVEVDGIARYVIVGLCEKGKLDEAVRIF 378 ++ Y + I F + A + + +G+ E +I C +GK+DEA + Sbjct: 350 DVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVM 409 Query: 379 NEIAVIGGFANCSNVCNCILSSYWKEGRVAEAECLFGRM 495 ++ V GF+ N +++ Y K G++AEA + M Sbjct: 410 VKM-VESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM 447 Score = 58.5 bits (140), Expect = 5e-07 Identities = 44/165 (26%), Positives = 72/165 (43%) Frame = +1 Query: 19 GYKKTEFLKEGRRIIFQLNSEGSVPEIMAYETYFRSLCNVGRLDEAEVLLKKMMKSRTVP 198 GY K E ++ ++ G V I+ Y T R LC G+ D+A L ++++ VP Sbjct: 500 GYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVP 559 Query: 199 ELCVYGSFIRALFLAARDEDAIRFFNVERKKGLVEVDGIARYVIVGLCEKGKLDEAVRIF 378 + I E A +F N + L ++ GLC +G L++ + +F Sbjct: 560 DESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLF 619 Query: 379 NEIAVIGGFANCSNVCNCILSSYWKEGRVAEAECLFGRMKDANYE 513 N + G + N I+SS+ KE R+ +A L M+ N E Sbjct: 620 N-TWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLE 663 Score = 57.0 bits (136), Expect = 2e-06 Identities = 39/152 (25%), Positives = 69/152 (45%) Frame = +1 Query: 19 GYKKTEFLKEGRRIIFQLNSEGSVPEIMAYETYFRSLCNVGRLDEAEVLLKKMMKSRTVP 198 GY K + E +++ ++ +G + T ++C +LD+A L K K + Sbjct: 430 GYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYIL 489 Query: 199 ELCVYGSFIRALFLAARDEDAIRFFNVERKKGLVEVDGIARYVIVGLCEKGKLDEAVRIF 378 + YG+ I F + + A++ + ++ G+V +I GLC GK D+AV Sbjct: 490 DEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKL 549 Query: 379 NEIAVIGGFANCSNVCNCILSSYWKEGRVAEA 474 NE+ + G + N I+ Y EG V +A Sbjct: 550 NEL-LEKGLVPDESTSNIIIHGYCWEGAVEKA 580 >ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820-like [Cucumis sativus] gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820-like [Cucumis sativus] Length = 611 Score = 78.6 bits (192), Expect = 5e-13 Identities = 44/160 (27%), Positives = 82/160 (51%) Frame = +1 Query: 19 GYKKTEFLKEGRRIIFQLNSEGSVPEIMAYETYFRSLCNVGRLDEAEVLLKKMMKSRTVP 198 G+ K E L ++ ++ S+G P ++ Y + LCN G+L+EA+VLL +M+ S P Sbjct: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371 Query: 199 ELCVYGSFIRALFLAARDEDAIRFFNVERKKGLVEVDGIARYVIVGLCEKGKLDEAVRIF 378 + Y + I E+A F+ K+GL ++ G C+ GK++EA + Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF-LL 430 Query: 379 NEIAVIGGFANCSNVCNCILSSYWKEGRVAEAECLFGRMK 498 ++ + GF ++ NC++ + +EG++ E + L M+ Sbjct: 431 QKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQ 470 >ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53700, chloroplastic; AltName: Full=Protein MATERNAL EFFECT EMBRYO ARREST 40; Flags: Precursor gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana] gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana] gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 754 Score = 73.2 bits (178), Expect = 2e-11 Identities = 43/160 (26%), Positives = 74/160 (46%) Frame = +1 Query: 19 GYKKTEFLKEGRRIIFQLNSEGSVPEIMAYETYFRSLCNVGRLDEAEVLLKKMMKSRTVP 198 G K +KE ++ Q+ + P + Y T +LC +++EA L + + +P Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398 Query: 199 ELCVYGSFIRALFLAARDEDAIRFFNVERKKGLVEVDGIARYVIVGLCEKGKLDEAVRIF 378 ++C + S I+ L L A+ F R KG + +I LC KGKLDEA+ + Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458 Query: 379 NEIAVIGGFANCSNVCNCILSSYWKEGRVAEAECLFGRMK 498 ++ + G A N ++ + K + EAE +F M+ Sbjct: 459 KQME-LSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497 >ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 618 Score = 73.2 bits (178), Expect = 2e-11 Identities = 42/160 (26%), Positives = 81/160 (50%) Frame = +1 Query: 22 YKKTEFLKEGRRIIFQLNSEGSVPEIMAYETYFRSLCNVGRLDEAEVLLKKMMKSRTVPE 201 Y K + + G R+ +++S+G V + + Y T + C G+L+ A+ L ++M+ P Sbjct: 394 YCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPS 453 Query: 202 LCVYGSFIRALFLAARDEDAIRFFNVERKKGLVEVDGIARYVIVGLCEKGKLDEAVRIFN 381 + YG + L + A+ F +K ++ GI +I G+C K+D+A +F Sbjct: 454 VVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFC 513 Query: 382 EIAVIGGFANCSNVCNCILSSYWKEGRVAEAECLFGRMKD 501 ++V G + N ++ K+G ++EA+ LF +MK+ Sbjct: 514 SLSVKGVKPDVLTY-NVMIGGLCKKGSLSEADMLFRKMKE 552 Score = 56.2 bits (134), Expect = 3e-06 Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 1/124 (0%) Frame = +1 Query: 19 GYKKTEFLKEGRRIIFQLNSEGSVPEIMAYETYFRSLCNVGRLDEAEVLLKKMMKSRTVP 198 G+ ++ L + + ++ S G P ++ Y LC+ G L +A + +KM KSR + Sbjct: 428 GFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMIL 487 Query: 199 ELCVYGSFIRALFLAARDEDAIRFFNVERKKGLVEVDGIARYVIV-GLCEKGKLDEAVRI 375 + +Y I + A++ +DA F KG V+ D + V++ GLC+KG L EA + Sbjct: 488 GIGIYNIIIHGMCNASKVDDAWSLFCSLSVKG-VKPDVLTYNVMIGGLCKKGSLSEADML 546 Query: 376 FNEI 387 F ++ Sbjct: 547 FRKM 550 Score = 55.8 bits (133), Expect = 3e-06 Identities = 32/120 (26%), Positives = 53/120 (44%) Frame = +1 Query: 40 LKEGRRIIFQLNSEGSVPEIMAYETYFRSLCNVGRLDEAEVLLKKMMKSRTVPELCVYGS 219 L E + + ++ + G P+ + Y + C RL EA +L M+ P + Y Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389 Query: 220 FIRALFLAARDEDAIRFFNVERKKGLVEVDGIARYVIVGLCEKGKLDEAVRIFNEIAVIG 399 I + A R ++ +R F KGLV ++ G C+ GKL+ A +F E+ G Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449 >ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp. lyrata] gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp. lyrata] Length = 754 Score = 73.2 bits (178), Expect = 2e-11 Identities = 43/160 (26%), Positives = 74/160 (46%) Frame = +1 Query: 19 GYKKTEFLKEGRRIIFQLNSEGSVPEIMAYETYFRSLCNVGRLDEAEVLLKKMMKSRTVP 198 G K +KE + Q+ + P + Y T +LC +++EA L + + +P Sbjct: 339 GLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398 Query: 199 ELCVYGSFIRALFLAARDEDAIRFFNVERKKGLVEVDGIARYVIVGLCEKGKLDEAVRIF 378 ++C + S I+ L L A+ F R KG + +I LC KGKLDEA+ + Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458 Query: 379 NEIAVIGGFANCSNVCNCILSSYWKEGRVAEAECLFGRMK 498 ++ + G A N ++ + K ++ EAE +F M+ Sbjct: 459 KQME-LSGCARSVITYNTLIDGFCKANKIREAEEIFDEME 497