BLASTX nr result
ID: Panax21_contig00033556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00033556
(1284 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3... 212 9e-72
ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu... 199 6e-71
gb|ACX85638.1| putative transposase [Cucumis melo] 211 1e-66
dbj|BAJ23914.1| transposase [Saintpaulia hybrid cultivar] 198 7e-63
emb|CAB82966.1| putative protein [Arabidopsis thaliana] 175 9e-63
>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
Oligoribonuclease [Medicago truncatula]
Length = 1551
Score = 212 bits (539), Expect(2) = 9e-72
Identities = 115/246 (46%), Positives = 158/246 (64%), Gaps = 4/246 (1%)
Frame = +1
Query: 1 MCLTAHWVNDDWKLCKRILNFYQIESH*GVAIGKLVHDLLTKWGIDRVFTITIDNASSND 180
M LTAH+++ DWK+ KRILNF I SH G IGK L W ID+VFTIT+DNASSND
Sbjct: 1127 MVLTAHFIDQDWKMHKRILNFCPITSHKGEVIGKKFEKCLEGWMIDKVFTITVDNASSND 1186
Query: 181 TVISYLKKFLRGPEA-ILENKYTHLRCCAHILNLIVKDGL--KDQHVFISRIQNAVRYVR 351
ISYLK + + L+ ++ H+RCCAHILNL+V DGL KD H IS+I+NAVRYVR
Sbjct: 1187 LAISYLKNRMEDWNSHPLKGEHLHVRCCAHILNLVVGDGLKSKDMHSSISKIRNAVRYVR 1246
Query: 352 SSSARLAKFKPCVEKEKIKCEKMVCLDVETRWNSTYTMLEIAVKYE*AFDRMLIEDLNYE 531
S++RL +FK C+++ +I+ + V D TRWNSTY MLE A+K++ AF R+ + + Y
Sbjct: 1247 GSASRLDRFKICIKEARIQDKSTVQYDCPTRWNSTYLMLESALKFQKAFKRLGEKCVEY- 1305
Query: 532 RFFKHEEDEAWEXXXXXXXXXXXMVE-GYPEWIDFENVKCFIQFLKIFYDVTMKIFGSNY 708
M+E G P +D++N KCF++FLK+F+++T K+ GS Y
Sbjct: 1306 ----------------------AMLEGGVPNNVDWDNAKCFVKFLKLFFEITKKVSGSTY 1343
Query: 709 CTSNLF 726
TS+ +
Sbjct: 1344 VTSSTY 1349
Score = 86.3 bits (212), Expect(2) = 9e-72
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Frame = +3
Query: 768 CSSGDLLMRDMAKRMKEKYDKYWDNLDNSNFLLYVSVALDPRYKMHYLEFCFARLYGK*S 947
C D ++ +MA +M KY KYW ++ N L++++V PR K ++ + + Y K
Sbjct: 1366 CHKDDPILANMATKMTAKYSKYWGDVAKMNMLVFIAVIFYPRRKFQFINWGLNKYYEK-- 1423
Query: 948 SKTTLMCEKVVKTLQEMFEYYKDNNGCDISSSATTVNMEGDLDDDFEKYMQE*VELVREK 1127
+C+KV + L +MFE Y + + + D+DD FEK M + L +
Sbjct: 1424 EVADSLCDKVKEALNKMFESY------------SRFSNKEDVDDQFEKDMDQDPNL--SQ 1469
Query: 1128 TEIDIYLGMVERRK---MKTLMFWVGEK*IR*SPILSKIARHVLGIPISTVASES 1283
TE+DIYL +K L +W P L IAR +L +PISTVASES
Sbjct: 1470 TEVDIYLSEPREKKNPDFDILNWWKVNS--TKYPTLGLIARDILAMPISTVASES 1522
>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
[Medicago truncatula]
Length = 1001
Score = 199 bits (507), Expect(2) = 6e-71
Identities = 104/247 (42%), Positives = 151/247 (61%), Gaps = 1/247 (0%)
Frame = +1
Query: 1 MCLTAHWVNDDWKLCKRILNFYQIESH*GVAIGKLVHDLLTKWGIDRVFTITIDNASSND 180
MC+TAH+++++W+L K+ILNF Q+ SH G I + L WG+ RV ++T+DNASSND
Sbjct: 208 MCVTAHFIDNNWRLHKKILNFCQVSSHTGETICATMDKCLNNWGLHRVLSLTVDNASSND 267
Query: 181 TVISYLKKFLRGPEAILEN-KYTHLRCCAHILNLIVKDGLKDQHVFISRIQNAVRYVRSS 357
+ LKK L +++ N Y H+RCCAH+LNLIVKDGL+D I RI+ AV YVRSS
Sbjct: 268 VGVRRLKKRLLSRGSLVMNGNYFHMRCCAHVLNLIVKDGLEDMDESILRIRQAVWYVRSS 327
Query: 358 SARLAKFKPCVEKEKIKCEKMVCLDVETRWNSTYTMLEIAVKYE*AFDRMLIEDLNYERF 537
RL+KFK ++++ + + VCLDVETRWN+TY M A+K+E F+ + D Y
Sbjct: 328 PLRLSKFKGLIDEQSVGGKSSVCLDVETRWNTTYLMAAAALKHEKTFEELCFLDQKYVNE 387
Query: 538 FKHEEDEAWEXXXXXXXXXXXMVEGYPEWIDFENVKCFIQFLKIFYDVTMKIFGSNYCTS 717
+ +G P D++ V+ + FLK+FYD T++I GS+Y TS
Sbjct: 388 LTTKG------------------KGVPTQDDWKRVREILPFLKMFYDATVRISGSSYLTS 429
Query: 718 NLFSLNL 738
N++ +
Sbjct: 430 NIYMFEI 436
Score = 95.9 bits (237), Expect(2) = 6e-71
Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Frame = +3
Query: 723 FFIELVKMQEAIVKLCSSGDLLMRDMAKRMKEKYDKYWDNLDNSNFLLYVSVALDPRYKM 902
+ E++ + + IV++CSS D+ +R MA+RMK KYDKYW N + N +L V++ DPR K+
Sbjct: 432 YMFEILGIGKRIVEMCSSEDVHLRSMAQRMKLKYDKYWGNYKSLNMMLLVALVFDPRRKV 491
Query: 903 HYLEFCFARLYGK*SSKTTL-MCEKVVKTLQEMFEYY-KDNNGCDISSSATTVNMEGDLD 1076
++ R Y + S + M E +K+L E EYY + + S + N + DL
Sbjct: 492 RLADWMIRRFYNEDDSDALIAMLESCLKSLYE--EYYDRVMHPRGNSEAPQAFNGDSDLY 549
Query: 1077 DDFEKYMQE*VELVREKTEIDIYLGMVERRKMK--TLMFWVGEK*IR*SPILSKIARHVL 1250
E Y+ + E++ YL R M+ L +W PIL+KIAR VL
Sbjct: 550 GTSEFYLSD--GCGTSDNELNTYLNESLERNMEINVLEWWKVNS--GRYPILAKIARDVL 605
Query: 1251 GIPISTVASES 1283
IPI+TVASES
Sbjct: 606 AIPITTVASES 616
>gb|ACX85638.1| putative transposase [Cucumis melo]
Length = 680
Score = 211 bits (538), Expect(2) = 1e-66
Identities = 111/243 (45%), Positives = 152/243 (62%), Gaps = 1/243 (0%)
Frame = +1
Query: 1 MCLTAHWVNDDWKLCKRILNFYQIESH*GVAIGKLVHDLLTKWGIDRVFTITIDNASSND 180
M +TAH+++DDW L KRILNF Q+ +H G IG+ + L WGIDR+FT+T+DNASSND
Sbjct: 191 MVITAHFIDDDWNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSND 250
Query: 181 TVISYLKKFLRGPEA-ILENKYTHLRCCAHILNLIVKDGLKDQHVFISRIQNAVRYVRSS 357
I+YL K +G +L+ ++ H+RCCAHILNLIV D LKD HV I RI+NAV+YVRSS
Sbjct: 251 VAIAYLVKKFKGRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRIRNAVKYVRSS 310
Query: 358 SARLAKFKPCVEKEKIKCEKMVCLDVETRWNSTYTMLEIAVKYE*AFDRMLIEDLNYERF 537
ARL FK +++K+ + + +DV TRWNST+TML+ A+K + F+R+ D +Y
Sbjct: 311 PARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSY--- 367
Query: 538 FKHEEDEAWEXXXXXXXXXXXMVEGYPEWIDFENVKCFIQFLKIFYDVTMKIFGSNYCTS 717
+ P D++N K F++FLK F +VTMK S TS
Sbjct: 368 --------------------LPKDDIPTTEDWDNAKVFVKFLKTFSEVTMKFSASMSVTS 407
Query: 718 NLF 726
N+F
Sbjct: 408 NIF 410
Score = 69.3 bits (168), Expect(2) = 1e-66
Identities = 66/215 (30%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Frame = +3
Query: 723 FFIELVKMQEAIVKLCSSGDLLMRDMAKRMKEKYDKYWD--NLDNSNFLLYVSVALDPRY 896
FF EL +QE I + S + L+ M M+ K++KYW + +N LLYVSV LDPRY
Sbjct: 410 FFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRY 469
Query: 897 KMHYLEFCFARLYGK*SSKT-TLMCEKVVKTLQEMF------EYYKDNNGC--------- 1028
K+ Y+ +CF + +K T E+ + L + + E Y C
Sbjct: 470 KLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQ 529
Query: 1029 ------DISSSATTVNMEGDLDDDFEKYMQE*VELVREKTEIDIYLGMVERRKM----KT 1178
ISSS + + D F++ + ++ KTE+ YL M
Sbjct: 530 SQSEIPSISSSG-SYKARATVHDRFKQSNKTCLD--DAKTEVTRYLDEARIDCMGDEYLD 586
Query: 1179 LMFWVGEK*IR*SPILSKIARHVLGIPISTVASES 1283
L+ W R I+S++AR + IPISTV SES
Sbjct: 587 LLTWWKVNASR-FKIISQVARDIYSIPISTVPSES 620
>dbj|BAJ23914.1| transposase [Saintpaulia hybrid cultivar]
Length = 742
Score = 198 bits (503), Expect(2) = 7e-63
Identities = 109/242 (45%), Positives = 151/242 (62%), Gaps = 1/242 (0%)
Frame = +1
Query: 1 MCLTAHWVNDDWKLCKRILNFYQIESH*GVAIGKLVHDLLTKWGIDRVFTITIDNASSND 180
M +TAH++++DWKL KRILNF +I SH G IGK++ L+ WGID+VFTIT+DNAS+ND
Sbjct: 211 MVITAHFLDNDWKLHKRILNFTKITSHKGDDIGKVLETCLSDWGIDKVFTITVDNASTND 270
Query: 181 TVISYLKKFLRGPEAIL-ENKYTHLRCCAHILNLIVKDGLKDQHVFISRIQNAVRYVRSS 357
+ Y++K L+ +L + KY HLRCC HI+NLIVK GLK + + I+N V+Y+ SS
Sbjct: 271 KAVEYMRKRLKEMGTLLLDGKYLHLRCCCHIINLIVKSGLKFLNEAVESIRNCVKYIHSS 330
Query: 358 SARLAKFKPCVEKEKIKCEKMVCLDVETRWNSTYTMLEIAVKYE*AFDRMLIEDLNYERF 537
+ARL +F+ C K+ V +DV TRWNSTYTML +A K++ F RM E + + +
Sbjct: 331 AARLDQFRECAILLKMDKMSTVPMDVPTRWNSTYTMLSVAYKFKKVFGRM-TESIQFVEY 389
Query: 538 FKHEEDEAWEXXXXXXXXXXXMVEGYPEWIDFENVKCFIQFLKIFYDVTMKIFGSNYCTS 717
F EE + E G P D+E + F+ FLK FYD T+++ S TS
Sbjct: 390 F--EEVDGSEKKKRV---------GPPMEKDWEKAQVFVNFLKRFYDTTLQLSASKKTTS 438
Query: 718 NL 723
L
Sbjct: 439 PL 440
Score = 70.5 bits (171), Expect(2) = 7e-63
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 25/193 (12%)
Frame = +3
Query: 780 DLLMRDMAKRMKEKYDKYWDNLDNSNFLLYVSVALDPRYKMHYLEFCFARLYGK*SSKTT 959
D +++++K+M+ K+ KYW +L+N N L+++ LDPRYK+ + + S+K
Sbjct: 461 DPSLQEVSKKMETKFKKYWGDLENVNKLIFLGHILDPRYKLQMIGIHLGDMKLD-STKIH 519
Query: 960 LMCEKVVKTLQEMFEYYKDNNGCDISSSATTVNMEGDLDDDFEKYMQE*VELVREKTEID 1139
+ + K+L E++ YK N+ D ++EG D D +K + E + + +++
Sbjct: 520 FFVDGLKKSLMELYHAYKGNSLLD--------SLEGVDDGDVDKELMEMYK--NDHVKLN 569
Query: 1140 IYLGMVERRKMKT-------------------------LMFWVGEK*IR*SPILSKIARH 1244
++ M + RK + L +W G P++SKIAR
Sbjct: 570 FHMKMAQVRKSQNQAEITNEVDKYFSDPFVKWSSNFDILEWWKGNTTTY--PVISKIARD 627
Query: 1245 VLGIPISTVASES 1283
+ IP STVASE+
Sbjct: 628 IFAIPSSTVASEN 640
>emb|CAB82966.1| putative protein [Arabidopsis thaliana]
Length = 705
Score = 175 bits (444), Expect(2) = 9e-63
Identities = 104/243 (42%), Positives = 146/243 (60%), Gaps = 3/243 (1%)
Frame = +1
Query: 1 MCLTAHWVNDDWKLCKRILNFYQIESH*GVAIGKLVHDLLTKWGIDRVFTITIDNASSND 180
M +TAH+++ DW+L +RI++F I H G I L WGI++VF+IT+DNAS+ND
Sbjct: 194 MVVTAHFIDMDWQLHRRIISFSPIPDHKGKTIANQFLRSLDDWGIEKVFSITVDNASAND 253
Query: 181 TVISYLKKFL--RGPEAILEN-KYTHLRCCAHILNLIVKDGLKDQHVFISRIQNAVRYVR 351
+ LK+ L R +A++ N + H+RC AHILNLI +GL+D I ++NAV+YVR
Sbjct: 254 KANTVLKERLSNRNSDALMMNGDFMHIRCGAHILNLIANEGLEDISNSIVSVRNAVKYVR 313
Query: 352 SSSARLAKFKPCVEKEKIKCEKMVCLDVETRWNSTYTMLEIAVKYE*AFDRMLIEDLNYE 531
+S++RL FK VE EKI V LD TRWNSTY ML+ A+KY+ AFDRM D Y+
Sbjct: 314 TSNSRLESFKRWVEVEKI-TRGSVVLDCVTRWNSTYLMLKSALKYKVAFDRMADMDKPYD 372
Query: 532 RFFKHEEDEAWEXXXXXXXXXXXMVEGYPEWIDFENVKCFIQFLKIFYDVTMKIFGSNYC 711
+FK + + +G P ID++N + ++FLK FYD T+ S
Sbjct: 373 AWFKEVDSNKKKR------------DGPPMAIDWDNARHMVRFLKAFYDSTLAFSSSIKV 420
Query: 712 TSN 720
TSN
Sbjct: 421 TSN 423
Score = 92.8 bits (229), Expect(2) = 9e-63
Identities = 71/211 (33%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Frame = +3
Query: 732 ELVKMQEAIVKLCSSGDLLMRDMAKRMKEKYDKYWDNLDNSNFLLYVSVALDPRYKMHYL 911
E+ K+Q ++ K+ S D +R+MA M K+DKYW+ + N +L V+ LDPR KM +
Sbjct: 428 EICKIQSSVQKMAFSQDSDLREMASAMTAKFDKYWEGTEKINKILIVAGVLDPRRKMVFT 487
Query: 912 EFCFARLYGK*SSKTTLMCEKVVKTLQEMFEYYK-----DNNGCDISSSATTV------- 1055
F F +YGK + K M E V+ L+++F+ Y N +S A V
Sbjct: 488 MFSFELIYGKGNPKCVEMKELVMDVLEKLFDIYSVRYATSNLQPSVSCDAENVTQVHQDF 547
Query: 1056 -NMEGD-LDDDFEKYMQE*VELVREKTEIDIYLGMVERRKMK-------------TLMFW 1190
NME D +DD F K+M V +KT + + +V+ K + L+ W
Sbjct: 548 ENMEVDNIDDPFLKFM------VAKKTSVAVVNELVKYLKDELHVTTENSLGLPFDLLDW 601
Query: 1191 VGEK*IR*SPILSKIARHVLGIPISTVASES 1283
+ PI+S +AR VL IP+S+VASES
Sbjct: 602 WKTNSSK-YPIMSLMAREVLAIPVSSVASES 631