BLASTX nr result
ID: Panax21_contig00033542
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033542 (557 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26957.3| unnamed protein product [Vitis vinifera] 67 8e-17 ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containin... 67 8e-17 ref|XP_004151447.1| PREDICTED: zinc finger CCCH domain-containin... 59 4e-07 >emb|CBI26957.3| unnamed protein product [Vitis vinifera] Length = 398 Score = 66.6 bits (161), Expect(2) = 8e-17 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 2/93 (2%) Frame = -1 Query: 275 HEDLMERRNLCLSQLRETAKEAEALRQENLNLQLANIELNKQFKNLLMLQSSDRQNXXXX 96 H+DL+ R NLCL+ LRETA+EAE LR EN NL++AN +LNK+ L++Q+S + Sbjct: 139 HQDLINRHNLCLNHLRETAQEAEVLRHENSNLRIANRDLNKRLS--LLIQNSIQNR---- 192 Query: 95 XXXXXXXXXXSLIDGFRRMRISE--KPAAWDDE 3 S+ D FRR+ + + + +WDDE Sbjct: 193 FVNSEYSSSRSMADEFRRLGLGDGNETRSWDDE 225 Score = 45.4 bits (106), Expect(2) = 8e-17 Identities = 28/57 (49%), Positives = 36/57 (63%) Frame = -3 Query: 489 TKMQKDMSTSHGGFNELSSLYSPFFNKSDGYDYSSLYPSIFPSTPNLNSPLFSPTPS 319 T+MQKD+S S GG SS P N+SDG + SLY SIF P+L++ + S TPS Sbjct: 46 TQMQKDISISPGGIKFFSS---PAGNRSDGLGFPSLYSSIFSPKPSLSNSV-SLTPS 98 >ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containing protein 15 [Vitis vinifera] Length = 396 Score = 66.6 bits (161), Expect(2) = 8e-17 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 2/93 (2%) Frame = -1 Query: 275 HEDLMERRNLCLSQLRETAKEAEALRQENLNLQLANIELNKQFKNLLMLQSSDRQNXXXX 96 H+DL+ R NLCL+ LRETA+EAE LR EN NL++AN +LNK+ L++Q+S + Sbjct: 137 HQDLINRHNLCLNHLRETAQEAEVLRHENSNLRIANRDLNKRLS--LLIQNSIQNR---- 190 Query: 95 XXXXXXXXXXSLIDGFRRMRISE--KPAAWDDE 3 S+ D FRR+ + + + +WDDE Sbjct: 191 FVNSEYSSSRSMADEFRRLGLGDGNETRSWDDE 223 Score = 45.4 bits (106), Expect(2) = 8e-17 Identities = 28/57 (49%), Positives = 36/57 (63%) Frame = -3 Query: 489 TKMQKDMSTSHGGFNELSSLYSPFFNKSDGYDYSSLYPSIFPSTPNLNSPLFSPTPS 319 T+MQKD+S S GG SS P N+SDG + SLY SIF P+L++ + S TPS Sbjct: 44 TQMQKDISISPGGIKFFSS---PAGNRSDGLGFPSLYSSIFSPKPSLSNSV-SLTPS 96 >ref|XP_004151447.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like [Cucumis sativus] gi|449521453|ref|XP_004167744.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like [Cucumis sativus] Length = 351 Score = 59.3 bits (142), Expect = 4e-07 Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 3/95 (3%) Frame = -1 Query: 281 EHHEDLMERRNLCLSQLRETAKEAEALRQENLNLQLANIELNKQFKNLLMLQSSDRQNXX 102 + H++++ R +LCL+QLRE +EA+ALRQEN++L+ N EL+K L++Q+S ++ Sbjct: 85 QDHQEMVNRHSLCLTQLREATEEADALRQENIHLRSINHELSKHLS--LLIQASVQKQ-- 140 Query: 101 XXXXXXXXXXXXSLIDGFRRMRISEKPA---AWDD 6 + +GFR + ++EK A AW+D Sbjct: 141 --YGSSDQAPPFNFAEGFRGLSLAEKGASSSAWED 173