BLASTX nr result

ID: Panax21_contig00033542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033542
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26957.3| unnamed protein product [Vitis vinifera]               67   8e-17
ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containin...    67   8e-17
ref|XP_004151447.1| PREDICTED: zinc finger CCCH domain-containin...    59   4e-07

>emb|CBI26957.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 66.6 bits (161), Expect(2) = 8e-17
 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = -1

Query: 275 HEDLMERRNLCLSQLRETAKEAEALRQENLNLQLANIELNKQFKNLLMLQSSDRQNXXXX 96
           H+DL+ R NLCL+ LRETA+EAE LR EN NL++AN +LNK+    L++Q+S +      
Sbjct: 139 HQDLINRHNLCLNHLRETAQEAEVLRHENSNLRIANRDLNKRLS--LLIQNSIQNR---- 192

Query: 95  XXXXXXXXXXSLIDGFRRMRISE--KPAAWDDE 3
                     S+ D FRR+ + +  +  +WDDE
Sbjct: 193 FVNSEYSSSRSMADEFRRLGLGDGNETRSWDDE 225



 Score = 45.4 bits (106), Expect(2) = 8e-17
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = -3

Query: 489 TKMQKDMSTSHGGFNELSSLYSPFFNKSDGYDYSSLYPSIFPSTPNLNSPLFSPTPS 319
           T+MQKD+S S GG    SS   P  N+SDG  + SLY SIF   P+L++ + S TPS
Sbjct: 46  TQMQKDISISPGGIKFFSS---PAGNRSDGLGFPSLYSSIFSPKPSLSNSV-SLTPS 98


>ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containing protein 15 [Vitis
           vinifera]
          Length = 396

 Score = 66.6 bits (161), Expect(2) = 8e-17
 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = -1

Query: 275 HEDLMERRNLCLSQLRETAKEAEALRQENLNLQLANIELNKQFKNLLMLQSSDRQNXXXX 96
           H+DL+ R NLCL+ LRETA+EAE LR EN NL++AN +LNK+    L++Q+S +      
Sbjct: 137 HQDLINRHNLCLNHLRETAQEAEVLRHENSNLRIANRDLNKRLS--LLIQNSIQNR---- 190

Query: 95  XXXXXXXXXXSLIDGFRRMRISE--KPAAWDDE 3
                     S+ D FRR+ + +  +  +WDDE
Sbjct: 191 FVNSEYSSSRSMADEFRRLGLGDGNETRSWDDE 223



 Score = 45.4 bits (106), Expect(2) = 8e-17
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = -3

Query: 489 TKMQKDMSTSHGGFNELSSLYSPFFNKSDGYDYSSLYPSIFPSTPNLNSPLFSPTPS 319
           T+MQKD+S S GG    SS   P  N+SDG  + SLY SIF   P+L++ + S TPS
Sbjct: 44  TQMQKDISISPGGIKFFSS---PAGNRSDGLGFPSLYSSIFSPKPSLSNSV-SLTPS 96


>ref|XP_004151447.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Cucumis sativus] gi|449521453|ref|XP_004167744.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           15-like [Cucumis sativus]
          Length = 351

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = -1

Query: 281 EHHEDLMERRNLCLSQLRETAKEAEALRQENLNLQLANIELNKQFKNLLMLQSSDRQNXX 102
           + H++++ R +LCL+QLRE  +EA+ALRQEN++L+  N EL+K     L++Q+S ++   
Sbjct: 85  QDHQEMVNRHSLCLTQLREATEEADALRQENIHLRSINHELSKHLS--LLIQASVQKQ-- 140

Query: 101 XXXXXXXXXXXXSLIDGFRRMRISEKPA---AWDD 6
                       +  +GFR + ++EK A   AW+D
Sbjct: 141 --YGSSDQAPPFNFAEGFRGLSLAEKGASSSAWED 173


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