BLASTX nr result

ID: Panax21_contig00033533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033533
         (1016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|...   111   3e-22
ref|XP_002310281.1| short internodes 1 [Populus trichocarpa] gi|...   110   4e-22
ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250...   108   3e-21
ref|XP_003548866.1| PREDICTED: uncharacterized protein LOC100781...   106   8e-21
ref|XP_003550407.1| PREDICTED: uncharacterized protein LOC100807...   105   2e-20

>ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|222836862|gb|EEE75255.1|
            short internodes 2 [Populus trichocarpa]
          Length = 344

 Score =  111 bits (277), Expect = 3e-22
 Identities = 72/182 (39%), Positives = 81/182 (44%), Gaps = 6/182 (3%)
 Frame = +1

Query: 487  MAGFFSLG----SGRSXXXXXXXXXXXXXXXXXXXESWFLYNRNIPQDDEENIPSPYRGL 654
            MAG FSLG    S  +                   E+WF Y        E+N    Y+G 
Sbjct: 1    MAGLFSLGRDSSSSGNNQEQQQNNNNSNPPNEIPQENWFCYR------SEDN---SYKGF 51

Query: 655  ELWXXXXXXXXXXXXXXXXRLQDFYPXXXXXXXXXXXXXXXXXXXXXDDRSAA--FLMMR 828
            ELW                  QD Y                         +AA  F+MMR
Sbjct: 52   ELWQQHHHHQELLHQRHQNPQQDLYSSAVGLGVGPSRASINISDESSSRSAAAAAFMMMR 111

Query: 829  XXXXXXXXXXXXXXISCQDCGNQAKKDCRHMRCRSCCKSRGFQCQTHVKSTWVPAAKRRE 1008
                          ISCQDCGNQAKKDC HMRCR+CCKSRGF+CQTHVKSTWVPA+KRRE
Sbjct: 112  PVGSGVGGS-----ISCQDCGNQAKKDCVHMRCRTCCKSRGFECQTHVKSTWVPASKRRE 166

Query: 1009 RQ 1014
            RQ
Sbjct: 167  RQ 168


>ref|XP_002310281.1| short internodes 1 [Populus trichocarpa] gi|222853184|gb|EEE90731.1|
            short internodes 1 [Populus trichocarpa]
          Length = 229

 Score =  110 bits (276), Expect = 4e-22
 Identities = 74/180 (41%), Positives = 81/180 (45%), Gaps = 4/180 (2%)
 Frame = +1

Query: 487  MAGFFSLGSGRSXXXXXXXXXXXXXXXXXXX-ESWFLYNRNIPQDDEENIPSPYRGLELW 663
            MAG FSLG G S                    ESWF Y         E+IP  Y+  ELW
Sbjct: 1    MAGLFSLGRGSSSSNNQEDQQNNNNPPTEIPQESWFWYK-------SEDIP--YKSFELW 51

Query: 664  XXXXXXXXXXXXXXXXRLQDFYPXXXXXXXXXXXXXXXXXXXXXDDRSAA---FLMMRXX 834
                              QD Y                         +AA   F+MMR  
Sbjct: 52   QQQHQELLHQRHQNPQ--QDLYSPAVGLGVGPSRTSINISDESSSRSAAAAEAFMMMRPG 109

Query: 835  XXXXXXXXXXXXISCQDCGNQAKKDCRHMRCRSCCKSRGFQCQTHVKSTWVPAAKRRERQ 1014
                        ISCQDCGNQAKKDC HMRCR+CCKSRGF+CQTHVKSTWVPA+KRRERQ
Sbjct: 110  GSGTGGAGS---ISCQDCGNQAKKDCIHMRCRTCCKSRGFECQTHVKSTWVPASKRRERQ 166


>ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250664 [Vitis vinifera]
          Length = 344

 Score =  108 bits (269), Expect = 3e-21
 Identities = 72/180 (40%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
 Frame = +1

Query: 487  MAGFFSLGSGRSXXXXXXXXXXXXXXXXXXXESWFLYNRNIPQDDEENIPSPYRGLELWX 666
            MAGFF LG GR                    ES F Y          N    Y+G ELW 
Sbjct: 1    MAGFFPLGGGRGSNQDSNPPNEIPP------ESCFFYR---------NEDISYKGFELWQ 45

Query: 667  XXXXXXXXXXXXXXXRLQDFYPXXXXXXXXXXXXXXXXXXXXXDDRSAAFLMMRXXXXXX 846
                             QD Y                      D   +AFLMMR      
Sbjct: 46   HQPQEQLHQRHQHHP--QDLYSSGPSLGVGSSRSSINLSD---DSSRSAFLMMRQAAGGG 100

Query: 847  XXXXXXXX----ISCQDCGNQAKKDCRHMRCRSCCKSRGFQCQTHVKSTWVPAAKRRERQ 1014
                        +SCQDCGNQAKKDC HMRCR+CCKSRGFQC TH+KSTWVPAAKRRERQ
Sbjct: 101  GAGAGGGGGGGGMSCQDCGNQAKKDCIHMRCRTCCKSRGFQCPTHIKSTWVPAAKRRERQ 160


>ref|XP_003548866.1| PREDICTED: uncharacterized protein LOC100781981 [Glycine max]
          Length = 361

 Score =  106 bits (265), Expect = 8e-21
 Identities = 50/71 (70%), Positives = 54/71 (76%)
 Frame = +1

Query: 802  RSAAFLMMRXXXXXXXXXXXXXXISCQDCGNQAKKDCRHMRCRSCCKSRGFQCQTHVKST 981
            RSAAF+ MR              ISCQDCGNQAKKDC HMRCR+CCKSRG+ CQTHVKST
Sbjct: 142  RSAAFVAMRAAGAEGGG------ISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKST 195

Query: 982  WVPAAKRRERQ 1014
            WVPA+KRRERQ
Sbjct: 196  WVPASKRRERQ 206


>ref|XP_003550407.1| PREDICTED: uncharacterized protein LOC100807290 [Glycine max]
          Length = 326

 Score =  105 bits (262), Expect = 2e-20
 Identities = 43/48 (89%), Positives = 48/48 (100%)
 Frame = +1

Query: 871  ISCQDCGNQAKKDCRHMRCRSCCKSRGFQCQTHVKSTWVPAAKRRERQ 1014
            ++CQDCGNQAKKDC+H+RCR+CCKSRGFQCQTHVKSTWVPAAKRRERQ
Sbjct: 113  MNCQDCGNQAKKDCQHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQ 160


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