BLASTX nr result

ID: Panax21_contig00033527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033527
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264766.1| PREDICTED: COBW domain-containing protein 2 ...   204   1e-50
ref|XP_003547836.1| PREDICTED: COBW domain-containing protein 2-...   200   2e-49
ref|XP_002519957.1| prli-interacting factor l, putative [Ricinus...   192   3e-47
ref|XP_002870004.1| predicted protein [Arabidopsis lyrata subsp....   186   2e-45
gb|ACU20198.1| unknown [Glycine max]                                  179   5e-43

>ref|XP_002264766.1| PREDICTED: COBW domain-containing protein 2 [Vitis vinifera]
           gi|296088399|emb|CBI37390.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  204 bits (518), Expect = 1e-50
 Identities = 107/172 (62%), Positives = 116/172 (67%)
 Frame = +2

Query: 5   LTKKIKHINGMAQIKLANFGNVDMDFVLGVGGYDLDRIDSAVPSDGSDCATHQXXXXXXX 184
           LT++IKHINGMAQIKLA FG VDMDFVLGVGGYDL+RIDS V  D S CATHQ       
Sbjct: 247 LTQRIKHINGMAQIKLAKFGCVDMDFVLGVGGYDLERIDSEVQVDSSHCATHQHETGKGH 306

Query: 185 XXXXXXXXXXXXXXXXXXXXXIVCEGTXXXXXXXXXXXXXXXXKGEDLYRMKGVLSVTDS 364
                                IV EGT                KGEDLYRMKGVL V  S
Sbjct: 307 HKGHHHDHVHDSAVSSVS---IVSEGTLDLDEVDDWLERLLEEKGEDLYRMKGVLCVNGS 363

Query: 365 DQRYVFQGVHSTLDGCPGKAWEPEEKRINKIVFIGRNLDETALRKGFKGCLV 520
           D+RYVFQGVHSTLDGCPGK WEP+EKR++K+VFIGRNLDETALRKGF+GCLV
Sbjct: 364 DERYVFQGVHSTLDGCPGKTWEPDEKRVSKLVFIGRNLDETALRKGFRGCLV 415


>ref|XP_003547836.1| PREDICTED: COBW domain-containing protein 2-like [Glycine max]
          Length = 424

 Score =  200 bits (508), Expect = 2e-49
 Identities = 105/173 (60%), Positives = 115/173 (66%)
 Frame = +2

Query: 2   VLTKKIKHINGMAQIKLANFGNVDMDFVLGVGGYDLDRIDSAVPSDGSDCATHQXXXXXX 181
           +LTKKIKHINGMAQIK A FG+VDMDFVLGVGGYDL+RI+S VP +    ++HQ      
Sbjct: 253 ILTKKIKHINGMAQIKQAKFGSVDMDFVLGVGGYDLERIESEVPGECPSSSSHQ-DDSGH 311

Query: 182 XXXXXXXXXXXXXXXXXXXXXXIVCEGTXXXXXXXXXXXXXXXXKGEDLYRMKGVLSVTD 361
                                 IV EGT                KG+DLYRMKGVLSV  
Sbjct: 312 EHKGHHHHHHDHVHDSAVSSVSIVAEGTLDLDEVDDWLERVIEEKGDDLYRMKGVLSVDS 371

Query: 362 SDQRYVFQGVHSTLDGCPGKAWEPEEKRINKIVFIGRNLDETALRKGFKGCLV 520
           SDQRYVFQGVHS LDGCPGK WEP EKRINK+VFIGRNLDETAL+KGFKGCLV
Sbjct: 372 SDQRYVFQGVHSMLDGCPGKTWEPNEKRINKLVFIGRNLDETALKKGFKGCLV 424


>ref|XP_002519957.1| prli-interacting factor l, putative [Ricinus communis]
           gi|223541003|gb|EEF42561.1| prli-interacting factor l,
           putative [Ricinus communis]
          Length = 413

 Score =  192 bits (489), Expect = 3e-47
 Identities = 102/175 (58%), Positives = 112/175 (64%), Gaps = 4/175 (2%)
 Frame = +2

Query: 5   LTKKIKHINGMAQIKLANFGNVDMDFVLGVGGYDLDRIDSAVPSDGSDCATHQXXXXXXX 184
           LT +IKHING+A +KLA +G+VDMDFVLGVGGYDL+RIDS V    S   TH+       
Sbjct: 238 LTNRIKHINGIAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVRIGNSCSGTHEHETAQEH 297

Query: 185 XXXXXXXXXXXXXXXXXXXXX----IVCEGTXXXXXXXXXXXXXXXXKGEDLYRMKGVLS 352
                                    IV EGT                KGEDLYRMKGVLS
Sbjct: 298 HEGHHHKECKSHHDHVHDSTVSSVSIVSEGTLDLDEVDDWFERLIEEKGEDLYRMKGVLS 357

Query: 353 VTDSDQRYVFQGVHSTLDGCPGKAWEPEEKRINKIVFIGRNLDETALRKGFKGCL 517
           VTDSDQRY+FQGVHSTLDGCPGK W P EKR+NK+VFIGRNLDETALRKGFKGCL
Sbjct: 358 VTDSDQRYIFQGVHSTLDGCPGKPWGPNEKRVNKLVFIGRNLDETALRKGFKGCL 412


>ref|XP_002870004.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315840|gb|EFH46263.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  186 bits (473), Expect = 2e-45
 Identities = 99/173 (57%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
 Frame = +2

Query: 5   LTKKIKHINGMAQIKLANFGNVDMDFVLGVGGYDLDRIDSAVPSDGSDCAT-HQXXXXXX 181
           LTK+IK IN MA IK   FG+VDMDFVLGVGGYDL+RIDS V  DG  CA  H       
Sbjct: 242 LTKRIKQINCMAPIKHTKFGDVDMDFVLGVGGYDLERIDSEVNGDGLSCAEDHDHHHHQC 301

Query: 182 XXXXXXXXXXXXXXXXXXXXXXIVCEGTXXXXXXXXXXXXXXXXKGEDLYRMKGVLSVTD 361
                                 IV EG                 KG+DLYRMKGVLS+  
Sbjct: 302 SHGKHKEHQHDHVHDSAVTSVSIVSEGKLDLDEVDDWLERLIEEKGDDLYRMKGVLSIDS 361

Query: 362 SDQRYVFQGVHSTLDGCPGKAWEPEEKRINKIVFIGRNLDETALRKGFKGCLV 520
           SDQRY+FQGVHS LDGCPGK+W PEEKRINK+VFIGRNLDET LRKGFKGCL+
Sbjct: 362 SDQRYIFQGVHSMLDGCPGKSWGPEEKRINKLVFIGRNLDETILRKGFKGCLI 414


>gb|ACU20198.1| unknown [Glycine max]
          Length = 161

 Score =  179 bits (453), Expect = 5e-43
 Identities = 95/162 (58%), Positives = 104/162 (64%)
 Frame = +2

Query: 35  MAQIKLANFGNVDMDFVLGVGGYDLDRIDSAVPSDGSDCATHQXXXXXXXXXXXXXXXXX 214
           MAQIK A FG+VDMDFVLGVGGYDL+RI+S VP +    ++HQ                 
Sbjct: 1   MAQIKQAKFGSVDMDFVLGVGGYDLERIESEVPGECPSSSSHQ-DDSGHEHKGHHHHHHD 59

Query: 215 XXXXXXXXXXXIVCEGTXXXXXXXXXXXXXXXXKGEDLYRMKGVLSVTDSDQRYVFQGVH 394
                      IV EGT                KG+DLYRMKGVLSV  SDQRYVFQGVH
Sbjct: 60  HVHDSAVSSVSIVAEGTLDLDEVDDWLERVIEEKGDDLYRMKGVLSVDSSDQRYVFQGVH 119

Query: 395 STLDGCPGKAWEPEEKRINKIVFIGRNLDETALRKGFKGCLV 520
           S LDGCPGK WEP EKRINK+VFIGRNLDETAL+KGFKGCLV
Sbjct: 120 SMLDGCPGKTWEPNEKRINKLVFIGRNLDETALKKGFKGCLV 161


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