BLASTX nr result

ID: Panax21_contig00033520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033520
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29820.3| unnamed protein product [Vitis vinifera]              258   5e-67
ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257...   258   5e-67
ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|2...   248   3e-64
ref|XP_002533439.1| conserved hypothetical protein [Ricinus comm...   247   6e-64
ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792...   240   1e-61

>emb|CBI29820.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  258 bits (658), Expect = 5e-67
 Identities = 133/168 (79%), Positives = 143/168 (85%), Gaps = 6/168 (3%)
 Frame = -3

Query: 487 LSITPSLGRKVTGTLFGKRRGHVSFAVQDDPRSAPVLLIELAVSTSSLVKEMSSGSVRIA 308
           LSITPSLGRKVTGTLFG RRGHVSFAVQDDPRS PVLL+ELA STS+LVKEMSSG VRIA
Sbjct: 106 LSITPSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELATSTSTLVKEMSSGLVRIA 165

Query: 307 LECQK--GRGRPGKLFKEPMWTMYCNGRKCGQALSRACNESDLHVLSTVQSVSVGAGVIP 134
           LEC+K   RGRP KLF+EPMWTMYCNGRKCG A+SR C E D HVLSTVQSVS GAGVIP
Sbjct: 166 LECEKVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDRHVLSTVQSVSAGAGVIP 225

Query: 133 VRKDCRS----EGELVYMRARFERVVGTHHSEAFYMMNPDGHGGPELS 2
              + +S    EGE++YMRARFERVVG+  SEAFYMMNPDG GGPELS
Sbjct: 226 TDDNRKSIVGVEGEMLYMRARFERVVGSRDSEAFYMMNPDGTGGPELS 273


>ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257201 [Vitis vinifera]
          Length = 262

 Score =  258 bits (658), Expect = 5e-67
 Identities = 133/168 (79%), Positives = 143/168 (85%), Gaps = 6/168 (3%)
 Frame = -3

Query: 487 LSITPSLGRKVTGTLFGKRRGHVSFAVQDDPRSAPVLLIELAVSTSSLVKEMSSGSVRIA 308
           LSITPSLGRKVTGTLFG RRGHVSFAVQDDPRS PVLL+ELA STS+LVKEMSSG VRIA
Sbjct: 89  LSITPSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELATSTSTLVKEMSSGLVRIA 148

Query: 307 LECQK--GRGRPGKLFKEPMWTMYCNGRKCGQALSRACNESDLHVLSTVQSVSVGAGVIP 134
           LEC+K   RGRP KLF+EPMWTMYCNGRKCG A+SR C E D HVLSTVQSVS GAGVIP
Sbjct: 149 LECEKVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDRHVLSTVQSVSAGAGVIP 208

Query: 133 VRKDCRS----EGELVYMRARFERVVGTHHSEAFYMMNPDGHGGPELS 2
              + +S    EGE++YMRARFERVVG+  SEAFYMMNPDG GGPELS
Sbjct: 209 TDDNRKSIVGVEGEMLYMRARFERVVGSRDSEAFYMMNPDGTGGPELS 256


>ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|222853997|gb|EEE91544.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  248 bits (634), Expect = 3e-64
 Identities = 128/172 (74%), Positives = 142/172 (82%), Gaps = 10/172 (5%)
 Frame = -3

Query: 487 LSITPSLGRKVTGTLFGKRRGHVSFAVQDDPRSAPVLLIELAVSTSSLVKEMSSGSVRIA 308
           LS+TPSLGRKVTGTLFG R GHVSFAVQDDP S PVLL+EL++ST+ LVKEMSSG VRIA
Sbjct: 38  LSLTPSLGRKVTGTLFGNRHGHVSFAVQDDPGSEPVLLLELSISTAMLVKEMSSGLVRIA 97

Query: 307 LECQKGR------GRPGKLFKEPMWTMYCNGRKCGQALSRACNESDLHVLSTVQSVSVGA 146
           LEC+K R      GRPGKLF EP WTMYCNGRKCG A+SR C  SD +VL TVQSVSVGA
Sbjct: 98  LECEKVRAPQVQTGRPGKLFNEPTWTMYCNGRKCGYAVSRRCTYSDWYVLGTVQSVSVGA 157

Query: 145 GVIPVRKDCR----SEGELVYMRARFERVVGTHHSEAFYMMNPDGHGGPELS 2
           GVIPV +D R     EGEL+YMRA+FERVVG+  SEAFYMMNP+G+GGPELS
Sbjct: 158 GVIPVVEDGRKSGGGEGELLYMRAKFERVVGSRDSEAFYMMNPEGNGGPELS 209


>ref|XP_002533439.1| conserved hypothetical protein [Ricinus communis]
           gi|223526713|gb|EEF28946.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  247 bits (631), Expect = 6e-64
 Identities = 129/171 (75%), Positives = 141/171 (82%), Gaps = 9/171 (5%)
 Frame = -3

Query: 487 LSITPSLGRKVTGTLFGKRRGHVSFAVQDDPRSAPVLLIELAVSTSSLVKEMSSGSVRIA 308
           LSI  SLGRKVTGTLFG RRGHVSFAVQDDPRS PVLL+ELA+STS+LVKEMSSG VRIA
Sbjct: 100 LSIKSSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELAMSTSTLVKEMSSGLVRIA 159

Query: 307 LECQK-----GRGRPGKLFKEPMWTMYCNGRKCGQALSRACNESDLHVLSTVQSVSVGAG 143
           LEC K        R GKLF EP WTMYCNGRKCG A+SR C E D HVL+TVQSVSVGAG
Sbjct: 160 LECDKVQVPTNGTRSGKLFNEPTWTMYCNGRKCGYAVSRTCTELDWHVLNTVQSVSVGAG 219

Query: 142 VIPV----RKDCRSEGELVYMRARFERVVGTHHSEAFYMMNPDGHGGPELS 2
           VIP+    RK+  SEGEL+YMRA+FERVVG+  SEAFYMMNP+G+GGPELS
Sbjct: 220 VIPMVEDGRKNAGSEGELLYMRAKFERVVGSRDSEAFYMMNPEGNGGPELS 270


>ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792802 [Glycine max]
          Length = 294

 Score =  240 bits (612), Expect = 1e-61
 Identities = 128/183 (69%), Positives = 144/183 (78%), Gaps = 20/183 (10%)
 Frame = -3

Query: 490 QLSITPSLGRKVTGTLFGKRRGHVSFAVQDDPRSAPVLLIELAVSTSSLVKEMSSGSVRI 311
           QLS+TPSLGRKVTGTLFG RRGH+SFAVQ  PR+ PVLL+ELA+STSSLVKEMSS  VRI
Sbjct: 107 QLSVTPSLGRKVTGTLFGHRRGHISFAVQLHPRAEPVLLLELAMSTSSLVKEMSSSLVRI 166

Query: 310 ALECQK------------GRGRPGKLFKEPMWTMYCNGRKCGQALSRACNESDLHVLSTV 167
           ALECQK            G GR  +LF+EP WTMYCNGR CG A+SR C + DLHVLSTV
Sbjct: 167 ALECQKVSVTAAVAHNNSGGGR-RRLFQEPAWTMYCNGRNCGYAVSRTCGDLDLHVLSTV 225

Query: 166 QSVSVGAGVIPVRKDCR--------SEGELVYMRARFERVVGTHHSEAFYMMNPDGHGGP 11
           QSVSVGAGVIP+ +D +        SEGEL+YMRARFERVVG+  SEAFYM+NPDG+GGP
Sbjct: 226 QSVSVGAGVIPLLEDGKGGGSGNGGSEGELMYMRARFERVVGSRDSEAFYMLNPDGNGGP 285

Query: 10  ELS 2
           ELS
Sbjct: 286 ELS 288


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