BLASTX nr result

ID: Panax21_contig00033516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033516
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325282.1| tir-nbs-lrr resistance protein [Populus tric...   111   2e-24
gb|ACR19032.1| TIR-NBS-LRR-type disease resistance-like protein ...    91   9e-23
ref|XP_002319057.1| tir-nbs-lrr resistance protein [Populus tric...    97   3e-22
ref|XP_003634573.1| PREDICTED: probable disease resistance prote...   109   5e-22
emb|CBI39196.3| unnamed protein product [Vitis vinifera]              109   5e-22

>ref|XP_002325282.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862157|gb|EEE99663.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 520

 Score =  111 bits (277), Expect(2) = 2e-24
 Identities = 63/123 (51%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
 Frame = -2

Query: 673 HDVFLSFRGKDTRITFTAHLYTSLKHTGIRTFFDDTELQRGETIFPQNC*QRLSNQGFPL 494
           +DVFLSFRG+DTR  FT HLYT+L + GI TF DD EL RGE I PQ      + +G  +
Sbjct: 1   YDVFLSFRGEDTRKNFTDHLYTALGNAGIHTFRDDNELPRGEEISPQ---LLKAIEGSRI 57

Query: 493 XXXXXXXXXXXSWWCLNEVLKILECKRTTGQLQLVLPIFYD--PSDVRRQTGSLENAFAN 320
                      S WCL+E++KI+EC++  G  Q+VLPIFYD  PSDVR+QTGS   AF  
Sbjct: 58  SIVVFSKHYASSRWCLDELVKIIECRQKIG--QVVLPIFYDTEPSDVRKQTGSYAKAFDE 115

Query: 319 HKD 311
           H++
Sbjct: 116 HEE 118



 Score = 27.3 bits (59), Expect(2) = 2e-24
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = -3

Query: 189 YGLFNSFYSCESNEAKLIMKIVDDVMHIVKKFTSLDVATHPVSMDSRIEDV 37
           +GL N        EA+ I +IV DV   +   T L VA HPV + SR++ +
Sbjct: 143 WGLHNE---ANGYEAEFIKRIVSDVACKLGNKT-LHVAKHPVGIYSRVQGI 189


>gb|ACR19032.1| TIR-NBS-LRR-type disease resistance-like protein [Pyrus x
           bretschneideri]
          Length = 774

 Score = 91.3 bits (225), Expect(3) = 9e-23
 Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = -2

Query: 676 THDVFLSFRGKDTRITFTAHLYTSLKHTGIRTFFDDTELQRGETIFPQNC*QRLSNQGFP 497
           ++DVFLSFRG+DTR  FT+HL+ +L++ G   F D+  L+RG  I P+      + +   
Sbjct: 13  SYDVFLSFRGEDTRHGFTSHLHAALQNRGFAAFIDEDNLKRGGEIKPE---LLRAIEESR 69

Query: 496 LXXXXXXXXXXXSWWCLNEVLKILECKRTTGQLQLVLPIFY--DPSDVRRQTGSLENAFA 323
           +           S WCL+E++KI+EC+   G  Q VLPIFY  DPS VR+Q G L  AF 
Sbjct: 70  ISVIVFSKSYAESSWCLDELVKIMECRERLG--QQVLPIFYHVDPSHVRKQEGCLAGAFQ 127

Query: 322 NHKD 311
            H+D
Sbjct: 128 EHED 131



 Score = 32.0 bits (71), Expect(3) = 9e-23
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 305 KVEIWSAALNKVSNFSGHHLQNDP 234
           +V+ W  AL + +N SGHHL N P
Sbjct: 148 RVKQWREALTQAANLSGHHLNNGP 171



 Score = 29.6 bits (65), Expect(3) = 9e-23
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 150 EAKLIMKIVDDVMHIVKKFTSLDVATHPVSMDSRIEDV 37
           EAK I  IV ++  +++      VA +PV +DSR++ +
Sbjct: 172 EAKDIKTIVGNIRELLRGTDEFQVAKYPVGIDSRVQPI 209


>ref|XP_002319057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222857433|gb|EEE94980.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 511

 Score = 97.4 bits (241), Expect(2) = 3e-22
 Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
 Frame = -2

Query: 673 HDVFLSFRGKDTRITFTAHLYTSLKHTGIRTFFDDTELQRGETIFPQNC*QRLSNQGFPL 494
           +DVFLSFRG+DTR  FT HLYT+L+  GI TF DD EL +GE I   +  + +      +
Sbjct: 1   YDVFLSFRGEDTRKNFTDHLYTALQKAGILTFQDDDELPKGEEI-SSHLLKAIKESNISI 59

Query: 493 XXXXXXXXXXXSWWCLNEVLKILECKRTTGQLQLVLPIFY--DPSDVRRQTGSLENAFAN 320
                        WCL+E+ +IL+C++T    Q+ LP+FY  DPSD+R+QTGS   AF  
Sbjct: 60  VVFSKGYASST--WCLDELSEILDCRQTA--RQIFLPVFYDIDPSDIRKQTGSFAEAFDR 115

Query: 319 HKD 311
           H++
Sbjct: 116 HEE 118



 Score = 33.9 bits (76), Expect(2) = 3e-22
 Identities = 25/81 (30%), Positives = 43/81 (53%)
 Frame = -3

Query: 279 KQGFKLFRASSSK*PNLLILAGQFSA*FD*YGLFNSFYSCESNEAKLIMKIVDDVMHIVK 100
           ++ FK       K  N L+ A   S  FD + + N       +E+KLI  IV++V+  + 
Sbjct: 117 EERFKEEMEKVQKLKNALVEAASLSG-FDLHSIANG------HESKLIQMIVEEVLSKLN 169

Query: 99  KFTSLDVATHPVSMDSRIEDV 37
               + VAT+PV +DS+++D+
Sbjct: 170 P-RYMKVATYPVGIDSQVKDI 189


>ref|XP_003634573.1| PREDICTED: probable disease resistance protein At5g63020-like
           [Vitis vinifera]
          Length = 632

 Score =  109 bits (273), Expect = 5e-22
 Identities = 61/124 (49%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
 Frame = -2

Query: 676 THDVFLSFRGKDTRITFTAHLYTSLKHTGIRTFFDDTELQRGETIFPQNC*QRLSNQGFP 497
           ++DVFLSFRG+DTR TF AHLY +L   G+ TFFDD +++RGE+I P       + +G  
Sbjct: 388 SYDVFLSFRGEDTRFTFAAHLYVALHRRGVNTFFDDHKIRRGESISPTLV---KAIEGSR 444

Query: 496 LXXXXXXXXXXXSWWCLNEVLKILECKRTTGQLQLVLPIFY--DPSDVRRQTGSLENAFA 323
                       S WCL E++KILEC++T G  QLVLPIFY  DPSDVRR  GS   A  
Sbjct: 445 SSIILLSQNYAGSSWCLEELVKILECRKTMG--QLVLPIFYNVDPSDVRRHKGSFGEALV 502

Query: 322 NHKD 311
            H++
Sbjct: 503 KHEN 506


>emb|CBI39196.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  109 bits (273), Expect = 5e-22
 Identities = 61/124 (49%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
 Frame = -2

Query: 676 THDVFLSFRGKDTRITFTAHLYTSLKHTGIRTFFDDTELQRGETIFPQNC*QRLSNQGFP 497
           ++DVFLSFRG+DTR TF AHLY +L   G+ TFFDD +++RGE+I P       + +G  
Sbjct: 452 SYDVFLSFRGEDTRFTFAAHLYVALHRRGVNTFFDDHKIRRGESISPTLV---KAIEGSR 508

Query: 496 LXXXXXXXXXXXSWWCLNEVLKILECKRTTGQLQLVLPIFY--DPSDVRRQTGSLENAFA 323
                       S WCL E++KILEC++T G  QLVLPIFY  DPSDVRR  GS   A  
Sbjct: 509 SSIILLSQNYAGSSWCLEELVKILECRKTMG--QLVLPIFYNVDPSDVRRHKGSFGEALV 566

Query: 322 NHKD 311
            H++
Sbjct: 567 KHEN 570


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