BLASTX nr result

ID: Panax21_contig00033513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033513
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like ...   226   3e-57
ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like ...   223   5e-56
ref|XP_002303073.1| predicted protein [Populus trichocarpa] gi|2...   221   2e-55
ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like ...   220   2e-55
ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like ...   213   3e-53

>ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
          Length = 585

 Score =  226 bits (577), Expect = 3e-57
 Identities = 139/278 (50%), Positives = 173/278 (62%), Gaps = 18/278 (6%)
 Frame = -1

Query: 781 SSCYNTPLGSPPK---LQVPIM-NHLVKEXXXXXXXXXXXNSALPA-LSTDPGFADRAAK 617
           +SCY+TPL SPPK   +++P M NHLVKE            ++  A  S DPGFA+RAAK
Sbjct: 142 TSCYSTPLSSPPKVNTIKIPTMVNHLVKEGMPPSLETPMSLNSTVAKFSADPGFAERAAK 201

Query: 616 FSCFGSRSFNGRTSPIGMNNTEFQYRSSGLLMGNG-NLTRVASSPSLKAAGSPMGIQQNK 440
           FSCFGSRS NGRT+ +G+NN E   RSS  L+ NG  L RV+SSPSLK   S MG Q+NK
Sbjct: 202 FSCFGSRSLNGRTTQLGLNNAELAQRSS--LVENGKRLPRVSSSPSLKVLESQMGTQENK 259

Query: 439 NS-VQTQMEMRSSNGTVSASDRKFSNLSGSVANSTEESSVSGQNPSGENGLRTPNELSSR 263
           NS +Q  ME+                     ANS EES++S Q P+G+ G++    ++SR
Sbjct: 260 NSPLQDLMEL---------------------ANSQEESTISEQTPNGDTGVKPSPYVNSR 298

Query: 262 KRKVVSRGKAKET----------AVKEAEGDDDSSVKRSKMTGCSGNNNGGVKMEEETNR 113
           KRK  S+GKAKET          +++ AE  +D + KRSK     GN NG VK EEE+  
Sbjct: 299 KRKGPSKGKAKETSASINPPMGLSLQAAEASEDWNAKRSKPNAGEGNENGQVKAEEESKG 358

Query: 112 GASD-EDQKQANNNQKPPEPPKDYIHVRARRGQATDSH 2
           G S+  D+KQ  +N KPPEPPKDYIHVRARRGQATDSH
Sbjct: 359 GNSNANDEKQNKSNSKPPEPPKDYIHVRARRGQATDSH 396


>ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
          Length = 548

 Score =  223 bits (567), Expect = 5e-56
 Identities = 132/269 (49%), Positives = 165/269 (61%), Gaps = 9/269 (3%)
 Frame = -1

Query: 781 SSCYNTPLGSPPKLQVPIMNHLVKEXXXXXXXXXXXN---SALPALSTDPGFADRAAKFS 611
           +SCY+TPL SPPK  V I++ LV E               S++   S DPGFA+RAAKFS
Sbjct: 105 TSCYSTPLSSPPK--VNIVHSLVNERLANLGGGKSTMALNSSVAEFSADPGFAERAAKFS 162

Query: 610 CFGSRSFNGRTSPIGMNNTEFQYRSSGLLMGNGNLTRVASSPSLKAAGSPMGIQQNKNSV 431
           CFGSRSFN R+  +G+NN E   RS+  +   G L RV+SSP LK  GS MG Q+NKNS 
Sbjct: 163 CFGSRSFNDRSVQLGVNNAELAQRSAPAMEHGGKLPRVSSSPLLKTLGSQMGAQENKNSA 222

Query: 430 QTQMEMRSSNGTVSASDRKFSNLSGSVANSTEESSVSGQNPSGENGLRTPNE-LSSRKRK 254
             Q + +                    ANS EES++S Q P+GE G++T  + ++SRKRK
Sbjct: 223 IHQEQEKMEG-----------------ANSQEESTISEQAPNGEIGVKTSQDMMNSRKRK 265

Query: 253 VVSRGKAKETA-----VKEAEGDDDSSVKRSKMTGCSGNNNGGVKMEEETNRGASDEDQK 89
             S+GKAKET+      K  EG +DS+ KRSK     GN NG VK+EEE+      E++K
Sbjct: 266 ASSKGKAKETSNSFNPTKGVEGSEDSNSKRSKPNEGDGNENGQVKVEEESKA----EEEK 321

Query: 88  QANNNQKPPEPPKDYIHVRARRGQATDSH 2
           Q  +N KPPEPPKDYIHVRARRGQATDSH
Sbjct: 322 QNKSNSKPPEPPKDYIHVRARRGQATDSH 350


>ref|XP_002303073.1| predicted protein [Populus trichocarpa] gi|222844799|gb|EEE82346.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  221 bits (562), Expect = 2e-55
 Identities = 133/269 (49%), Positives = 162/269 (60%), Gaps = 9/269 (3%)
 Frame = -1

Query: 781 SSCYNTPLGSPPKLQVPIMNHLVKEXXXXXXXXXXXN--SALPALSTDPGFADRAAKFSC 608
           +SCY TPL SPPKL +P+M+   KE              S++   + DPGFA+RAAKFSC
Sbjct: 129 TSCYTTPLNSPPKLNMPVMDQFSKEHLNIPSLGKPMGLNSSVAEFTADPGFAERAAKFSC 188

Query: 607 FGSRSFNGRTSPIGMNNTEFQYRSSGLLMGNGNLTRVASSPSLKAAGSPMGIQQNKNSVQ 428
           FGSRSFNGR S +G+NN E        LMGNG L RVASSP LKA GS  G         
Sbjct: 189 FGSRSFNGRISQLGLNNAEMA-NGCNPLMGNGKLARVASSPLLKAVGSQKG--------- 238

Query: 427 TQMEMRSSNGTVSASDRKFSNLSGSVANSTEESSVSGQNPSGENGLRTPNELSSRKRKVV 248
                   N +    DR       S   +++ESSVS Q PSGE GL+  NEL+SRKRK +
Sbjct: 239 --------NKSTPLQDR-------SELTNSQESSVSEQIPSGEAGLKASNELNSRKRKAL 283

Query: 247 SRGKAKE-------TAVKEAEGDDDSSVKRSKMTGCSGNNNGGVKMEEETNRGASDEDQK 89
           S+GKAK+       +A K+AE DD+S+ KR K      N N  VK EEE  +G+ D+ Q 
Sbjct: 284 SKGKAKQSASNPPASATKDAETDDNSNTKRIKPNEGEENENSPVKAEEEP-KGSGDDIQN 342

Query: 88  QANNNQKPPEPPKDYIHVRARRGQATDSH 2
           +AN+  +PPEPPKDYIHVRARRGQATDSH
Sbjct: 343 KANS--RPPEPPKDYIHVRARRGQATDSH 369


>ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
          Length = 586

 Score =  220 bits (561), Expect = 2e-55
 Identities = 137/274 (50%), Positives = 167/274 (60%), Gaps = 14/274 (5%)
 Frame = -1

Query: 781 SSCYNTPLGSPPKL---QVPIM-NHLVKEXXXXXXXXXXXNSALPA-LSTDPGFADRAAK 617
           +SCY+TPL S PK+   ++P M  HLVKE            ++  A  S DPGFA+RAAK
Sbjct: 145 TSCYSTPLSSSPKVNMNKIPTMVKHLVKEGMPLSLGTSTSLNSTVAEFSADPGFAERAAK 204

Query: 616 FSCFGSRSFNGRTSPIGMNNTEFQYRSSGLLM-GNGNLTRVASSPSLKAAGSPMGIQQNK 440
            SCFGSRSFNGRT+ + +N  E   RSS L+  G   L RV+SSPSLK  GS MG Q+NK
Sbjct: 205 LSCFGSRSFNGRTTQLCLNIAELAQRSSPLVENGKKQLPRVSSSPSLKVLGSQMGTQENK 264

Query: 439 NS-VQTQMEMRSSNGTVSASDRKFSNLSGSVANSTEESSVSGQNPSGENGLRTPNELSSR 263
           NS +Q  ME                     VANS EES++S Q P+G+ G +    ++SR
Sbjct: 265 NSPLQDLME---------------------VANSQEESAISEQTPNGDTGEKPSPYVNSR 303

Query: 262 KRKVVSRGKAKETAVKE-----AEGDDDSSVKRSKMTGCSGNNNGGVKMEEETNRG--AS 104
           KRK  S+GKAKET+        AE  DDS+ KRSK     GN NG VK EEE+  G  ++
Sbjct: 304 KRKGPSKGKAKETSTSTNPPMAAEASDDSNAKRSKPNEGEGNENGQVKAEEESKGGNNSN 363

Query: 103 DEDQKQANNNQKPPEPPKDYIHVRARRGQATDSH 2
             D+KQ  +N KPPEPPKDYIHVRARRGQATDSH
Sbjct: 364 ANDEKQNKSNSKPPEPPKDYIHVRARRGQATDSH 397


>ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
          Length = 582

 Score =  213 bits (543), Expect = 3e-53
 Identities = 130/266 (48%), Positives = 163/266 (61%), Gaps = 6/266 (2%)
 Frame = -1

Query: 781 SSCYNTPLGSPPKLQVPIMNHLVKEXXXXXXXXXXXNSALPALSTDPGFADRAAKFSCFG 602
           +SCY+TPL SPPK  V I+N L              NS++   S DPGFA+RAAKFSCFG
Sbjct: 151 TSCYSTPLSSPPK--VNIVNSL--------STTTVLNSSVAEFSADPGFAERAAKFSCFG 200

Query: 601 SRSFNGRTSPIGMNNTEFQYRSSGLLMGNGNLTRVASSPSLKAAGSPMGIQQNKNSVQTQ 422
           SRSFN R+  + +NN E   RS+  +   G L RV+SSP LK  GS MG Q+NKNS   Q
Sbjct: 201 SRSFNDRSVQLRVNNAELAQRSAPAMEHGGKLPRVSSSPLLKTLGSQMGAQENKNSAIHQ 260

Query: 421 MEMRSSNGTVSASDRKFSNLSGSVANSTEESSVSGQNPSGENGLRTPNE-LSSRKRKVVS 245
            + +                    ANS EES++S Q P+GE G++T  + ++SRKRK  S
Sbjct: 261 EQEKMEG-----------------ANSQEESTISEQTPNGEIGVKTSQDIMNSRKRKASS 303

Query: 244 RGKAKETA-----VKEAEGDDDSSVKRSKMTGCSGNNNGGVKMEEETNRGASDEDQKQAN 80
           +GKAKET+      K  EG + S+ KRSK     GN NG VK+EEE+      E++KQ+ 
Sbjct: 304 KGKAKETSNTTNPTKGVEGSEYSNSKRSKPN--EGNENGQVKVEEESKA----EEEKQSK 357

Query: 79  NNQKPPEPPKDYIHVRARRGQATDSH 2
           +N KPPEPPKDYIHVRARRGQATDSH
Sbjct: 358 SNSKPPEPPKDYIHVRARRGQATDSH 383


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