BLASTX nr result

ID: Panax21_contig00033491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033491
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266717.2| PREDICTED: asparaginyl-tRNA synthetase, chlo...   104   8e-21
ref|XP_003635124.1| PREDICTED: asparaginyl-tRNA synthetase, chlo...   104   8e-21
ref|XP_002309798.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002327980.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_004147209.1| PREDICTED: asparagine--tRNA ligase, chloropl...    81   1e-13

>ref|XP_002266717.2| PREDICTED: asparaginyl-tRNA synthetase,
           chloroplastic/mitochondrial-like isoform 1 [Vitis
           vinifera]
          Length = 549

 Score =  104 bits (259), Expect = 8e-21
 Identities = 63/139 (45%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
 Frame = -2

Query: 392 AVALSPATSLRLKPFSTSVRFLSVYRRICSKSLPSAPKTLATNSPFPPKSHIHHYIHPPF 213
           A AL+P  SLR KP S +VR LS Y +   ++ P+  +T      FP    ++  + PPF
Sbjct: 2   AAALAPVVSLRFKPQS-AVRLLSAYTKTNPRNFPTTSQTRMVTLHFP---QLYQPLTPPF 57

Query: 212 PCVSI------RLQFSSVIASALSPGEATEKQKTEVFETE---RVGKFRKRFRIVDIKGG 60
               +      R  F + I+ ALS GEA EK K E F  E   +VG+FRKR R+VDIKGG
Sbjct: 58  IFFGVGAARPRRRCFCTAISGALSSGEAIEKPKPEFFSAETGEKVGEFRKRLRVVDIKGG 117

Query: 59  PDEGLYRVGHNFVVKGWVR 3
           PDEGL R+G    VKGWVR
Sbjct: 118 PDEGLDRLGQTLAVKGWVR 136


>ref|XP_003635124.1| PREDICTED: asparaginyl-tRNA synthetase,
           chloroplastic/mitochondrial-like isoform 2 [Vitis
           vinifera] gi|297744376|emb|CBI37350.3| unnamed protein
           product [Vitis vinifera]
          Length = 584

 Score =  104 bits (259), Expect = 8e-21
 Identities = 63/139 (45%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
 Frame = -2

Query: 392 AVALSPATSLRLKPFSTSVRFLSVYRRICSKSLPSAPKTLATNSPFPPKSHIHHYIHPPF 213
           A AL+P  SLR KP S +VR LS Y +   ++ P+  +T      FP    ++  + PPF
Sbjct: 2   AAALAPVVSLRFKPQS-AVRLLSAYTKTNPRNFPTTSQTRMVTLHFP---QLYQPLTPPF 57

Query: 212 PCVSI------RLQFSSVIASALSPGEATEKQKTEVFETE---RVGKFRKRFRIVDIKGG 60
               +      R  F + I+ ALS GEA EK K E F  E   +VG+FRKR R+VDIKGG
Sbjct: 58  IFFGVGAARPRRRCFCTAISGALSSGEAIEKPKPEFFSAETGEKVGEFRKRLRVVDIKGG 117

Query: 59  PDEGLYRVGHNFVVKGWVR 3
           PDEGL R+G    VKGWVR
Sbjct: 118 PDEGLDRLGQTLAVKGWVR 136


>ref|XP_002309798.1| predicted protein [Populus trichocarpa] gi|222852701|gb|EEE90248.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 64/136 (47%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
 Frame = -2

Query: 395 AAVALSPATSLRLKPFSTSVRFLSVYRRICSKSLPSAPKTLATNSPFPPKSHIHHYIHPP 216
           A  AL PATSLRL P ST +R LS Y +    +LP   KT+      PPK   HH+    
Sbjct: 2   AIAALGPATSLRLNPGST-LRLLSFYPKSNPSNLPEILKTMTKPHAIPPK--FHHFFQ-- 56

Query: 215 FPCVSIRLQFSSVIASALSPGEAT-----EKQKTEVFETERVGKFRKRFRIVDIKGGPDE 51
              +  R  F SVI+ AL   E+      EK+K++V    RVG+FRK+ +I DIKGGPDE
Sbjct: 57  LSGLPRRRFFCSVISGALQSNESAKVGFLEKEKSDV--GNRVGEFRKKLKIADIKGGPDE 114

Query: 50  GLYRVGHNFVVKGWVR 3
           GL RVG   VV GWVR
Sbjct: 115 GLDRVGKTIVVMGWVR 130


>ref|XP_002327980.1| predicted protein [Populus trichocarpa] gi|222837389|gb|EEE75768.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 60/131 (45%), Positives = 72/131 (54%)
 Frame = -2

Query: 395 AAVALSPATSLRLKPFSTSVRFLSVYRRICSKSLPSAPKTLATNSPFPPKSHIHHYIHPP 216
           A  AL PATSLRL P ST +R LS Y +    +L    KT+      PPK H H      
Sbjct: 2   AISALGPATSLRLTPGST-LRLLSFYSKSNPSNLSGILKTITKPHAIPPKFH-HLLQLSG 59

Query: 215 FPCVSIRLQFSSVIASALSPGEATEKQKTEVFETERVGKFRKRFRIVDIKGGPDEGLYRV 36
            PC   R  F SVI  AL   E+ + +K       RVG+FR++ +I DIKGGPDEGL RV
Sbjct: 60  LPC---RRFFCSVIYGALQSSESAKVEKKGEIGN-RVGEFRRKLKIADIKGGPDEGLDRV 115

Query: 35  GHNFVVKGWVR 3
           G   +V GWVR
Sbjct: 116 GKTIIVMGWVR 126


>ref|XP_004147209.1| PREDICTED: asparagine--tRNA ligase,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449504980|ref|XP_004162346.1| PREDICTED:
           asparagine--tRNA ligase,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 562

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 56/136 (41%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
 Frame = -2

Query: 392 AVALSPATSLRLKPFSTSVRFLSVYRRICSKSLPSAPKTLATNSPFPPKSHIHHYIHPPF 213
           A  +SPATSLR  P ST +RF+S   R     LP                  HH + PP 
Sbjct: 2   AAVISPATSLRFNPCST-LRFISGLPR----KLP------------------HHILFPPI 38

Query: 212 PCVSIRLQFSSVIASALSPGEATEKQKTEVFET------ERVGKFRKRFRIVDIKGGPDE 51
                   F     SA+S GEA EK K +V +       E+VG+FRK+ RI +IKGG DE
Sbjct: 39  FPRHSSCYFRRSFCSAVSAGEAAEKTKPDVSKDWKVTRGEKVGEFRKKLRISEIKGGRDE 98

Query: 50  GLYRVGHNFVVKGWVR 3
           G+ R+G  FVV GWVR
Sbjct: 99  GVDRLGQTFVVMGWVR 114


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