BLASTX nr result
ID: Panax21_contig00033488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00033488
(1302 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31672.3| unnamed protein product [Vitis vinifera] 220 7e-55
ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [V... 220 7e-55
emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera] 214 5e-53
ref|XP_002530844.1| zinc finger protein, putative [Ricinus commu... 191 2e-46
ref|XP_002332583.1| f-box family protein [Populus trichocarpa] g... 187 1e-45
>emb|CBI31672.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 220 bits (560), Expect = 7e-55
Identities = 146/324 (45%), Positives = 174/324 (53%), Gaps = 66/324 (20%)
Frame = -2
Query: 1241 WLDPPNWQQ---HQPGVVKSSQLXXXXXXXPT-----------SGSIRHNSTAERARLTK 1104
+LDPPNWQQ HQPG + P +G+IR S A+RARL K
Sbjct: 9 YLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSMADRARLAK 68
Query: 1103 LVQPESTAQKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTRGGALRNVPVGGGCRM 924
L QPE TA KCPRCESTNTKFCY+NNYSLSQPR+FCK CRRYWTRGGALRNVPVGGGCR
Sbjct: 69 LPQPE-TALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRR 127
Query: 923 SKKNNTSARSKSTPVXXXXXXXXXXXXXXXXXXXXGHV-----PLTPLPQFPFSPPLHDH 759
+K++ + RSKS PV + P P PQ F PPLH H
Sbjct: 128 NKRSKGN-RSKS-PVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLPPLH-H 184
Query: 758 ISNFGAGDHIGFSFGVVQPPAMVA--------------ACGG------TGGFGDH----- 654
++++GAGD IG +FG +QPP V+ +C G +GG +H
Sbjct: 185 LADYGAGD-IGLNFGGIQPPVAVSGGGNSGTDIEFPIGSCSGGGGPILSGGLAEHWRLQQ 243
Query: 653 RQQFPFLAGLEPPSAAGMYKFQSEVCDFSD------------------QISVVTFEENQE 528
QQFPFLAGLEPPS G+Y F+ E + Q++ V EENQ
Sbjct: 244 VQQFPFLAGLEPPS--GLYSFEGEGTEPPSYLGGSGHLRAKALDSGVTQMTAVKIEENQG 301
Query: 527 LINLPKKFLGFPGNDQ----QCWN 468
L NL + FLG PGNDQ WN
Sbjct: 302 L-NLSRNFLGLPGNDQYWSGNTWN 324
>ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [Vitis vinifera]
Length = 338
Score = 220 bits (560), Expect = 7e-55
Identities = 146/324 (45%), Positives = 174/324 (53%), Gaps = 66/324 (20%)
Frame = -2
Query: 1241 WLDPPNWQQ---HQPGVVKSSQLXXXXXXXPT-----------SGSIRHNSTAERARLTK 1104
+LDPPNWQQ HQPG + P +G+IR S A+RARL K
Sbjct: 9 YLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSMADRARLAK 68
Query: 1103 LVQPESTAQKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTRGGALRNVPVGGGCRM 924
L QPE TA KCPRCESTNTKFCY+NNYSLSQPR+FCK CRRYWTRGGALRNVPVGGGCR
Sbjct: 69 LPQPE-TALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRR 127
Query: 923 SKKNNTSARSKSTPVXXXXXXXXXXXXXXXXXXXXGHV-----PLTPLPQFPFSPPLHDH 759
+K++ + RSKS PV + P P PQ F PPLH H
Sbjct: 128 NKRSKGN-RSKS-PVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLPPLH-H 184
Query: 758 ISNFGAGDHIGFSFGVVQPPAMVA--------------ACGG------TGGFGDH----- 654
++++GAGD IG +FG +QPP V+ +C G +GG +H
Sbjct: 185 LADYGAGD-IGLNFGGIQPPVAVSGGGNSGTDIEFPIGSCSGGGGPILSGGLAEHWRLQQ 243
Query: 653 RQQFPFLAGLEPPSAAGMYKFQSEVCDFSD------------------QISVVTFEENQE 528
QQFPFLAGLEPPS G+Y F+ E + Q++ V EENQ
Sbjct: 244 VQQFPFLAGLEPPS--GLYSFEGEGTEPPSYLGGSGHLRAKALDSGVTQMTAVKIEENQG 301
Query: 527 LINLPKKFLGFPGNDQ----QCWN 468
L NL + FLG PGNDQ WN
Sbjct: 302 L-NLSRNFLGLPGNDQYWSGNTWN 324
>emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]
Length = 338
Score = 214 bits (544), Expect = 5e-53
Identities = 144/324 (44%), Positives = 172/324 (53%), Gaps = 66/324 (20%)
Frame = -2
Query: 1241 WLDPPNWQQ---HQPGVVKSSQLXXXXXXXPT-----------SGSIRHNSTAERARLTK 1104
+LDPPNWQQ HQPG + P +G+IR S A+RARL K
Sbjct: 9 YLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSMADRARLAK 68
Query: 1103 LVQPESTAQKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTRGGALRNVPVGGGCRM 924
L QPE TA KCPRCESTNTKFCY+NNYSLSQPR+FCK CRRYWTRGGALRNVPVGGGCR
Sbjct: 69 LPQPE-TALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRR 127
Query: 923 SKKNNTSARSKSTPVXXXXXXXXXXXXXXXXXXXXGHV-----PLTPLPQFPFSPPLHDH 759
+K++ + RSKS PV + P P PQ F P LH H
Sbjct: 128 NKRSKGN-RSKS-PVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLPXLH-H 184
Query: 758 ISNFGAGDHIGFSFGVVQPPAMVA--------------ACGG------TGGFGD-----H 654
++++GAGD IG +FG +QPP V+ +C G +GG +
Sbjct: 185 LADYGAGD-IGLNFGGIQPPVAVSGGGNSGTDIEFPIGSCSGGGGPILSGGLAEQWRLQQ 243
Query: 653 RQQFPFLAGLEPPSAAGMYKFQSEVCDFSD------------------QISVVTFEENQE 528
QQFPFLAGLEPPS G+Y F+ E + Q++ V EENQ
Sbjct: 244 VQQFPFLAGLEPPS--GLYSFEGEGTEPPSYLGGSGHLRAKALDSGVTQMTAVKIEENQG 301
Query: 527 LINLPKKFLGFPGNDQ----QCWN 468
L NL + FLG PGNDQ WN
Sbjct: 302 L-NLSRNFLGLPGNDQYWSGNTWN 324
>ref|XP_002530844.1| zinc finger protein, putative [Ricinus communis]
gi|223529568|gb|EEF31518.1| zinc finger protein, putative
[Ricinus communis]
Length = 338
Score = 191 bits (485), Expect(2) = 2e-46
Identities = 134/316 (42%), Positives = 160/316 (50%), Gaps = 62/316 (19%)
Frame = -2
Query: 1241 WLDPPNWQQH---QPGVV--KSSQLXXXXXXXP------------TSGSIRHNSTAERAR 1113
+LDPPNW Q QPG +S QL ++GSIR S AERAR
Sbjct: 10 YLDPPNWHQQSNQQPGGAGGESHQLPPPPPPPGGGGGVGGGGSGGSTGSIRPGSMAERAR 69
Query: 1112 LTKLVQPESTAQKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTRGGALRNVPVGGG 933
+ K+ QPE TA KCPRCESTNTKFCY+NNYSL+QPR+FCKTCRRYWTRGGALRNVPVGGG
Sbjct: 70 MAKVPQPE-TALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGG 128
Query: 932 CRMSKKNNTSARSKSTPVXXXXXXXXXXXXXXXXXXXXGHVPLTPLPQFPFSPPLHDHIS 753
CR +K++ S RSKS P GH+P P P P PPLH H++
Sbjct: 129 CRRNKRSKGSNRSKS-PSKAGSSSSSGLVSNSCINDIIGHMPPPP-PHLPILPPLH-HLT 185
Query: 752 NFGAGDHIGFSFGVVQPPAMVAACGGTG--------------GFGD-------------H 654
+F + D IG +F +QP + A GG G G G
Sbjct: 186 DFNSTD-IGLNFSGIQPQVVAPAGGGAGMEFQIGSTSSGGGGGVGSILSSGLVDQWRLQQ 244
Query: 653 RQQFPFLAGLEPPSAAGMYKFQSEVCDFSD---------------QISVVTFEEN---QE 528
QQFPFL LEP G+Y F+ E + Q + V EEN +
Sbjct: 245 AQQFPFLPNLEP----GLYHFEGEGAGPPNYVGQLRSKPLETGVTQRASVKMEENNHHHQ 300
Query: 527 LINLPKKFLGFPGNDQ 480
+NL K F F GNDQ
Sbjct: 301 GLNLSKNF--FSGNDQ 314
Score = 22.7 bits (47), Expect(2) = 2e-46
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 457 NALTGINGFTSSSASNFL 404
NA T I GF SSS S+ L
Sbjct: 321 NAWTDIPGFNSSSTSHLL 338
>ref|XP_002332583.1| f-box family protein [Populus trichocarpa]
gi|222832921|gb|EEE71398.1| f-box family protein [Populus
trichocarpa]
Length = 337
Score = 187 bits (474), Expect(2) = 1e-45
Identities = 130/315 (41%), Positives = 162/315 (51%), Gaps = 61/315 (19%)
Frame = -2
Query: 1241 WLDPPNWQQ---HQPGVVKSSQ-----------LXXXXXXXPTSGSIRHNSTAERARLTK 1104
+LDPPNWQQ +QP ++ T+GSIR S +RARL K
Sbjct: 9 YLDPPNWQQQHNNQPPAGAGNENPQLPPPSGPPTGGGDGGGTTAGSIRPGSMTDRARLAK 68
Query: 1103 LVQPESTAQKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTRGGALRNVPVGGGCRM 924
+ PE A KCPRCESTNTKFCY+NNYSL+QPR+FCKTCRRYWTRGGALRNVPVGGGCR
Sbjct: 69 IPLPEM-ALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR 127
Query: 923 SKKNNTSARSKSTPVXXXXXXXXXXXXXXXXXXXXGHVPLTPLPQFPFSPPLHDHISNFG 744
+K++ S RSKS PV G++ TP P P PPLH H+ ++
Sbjct: 128 NKRSKGSGRSKS-PVKAGSSSSGGLSSNGGTTDITGNMT-TPPPLLPIFPPLH-HLGDYN 184
Query: 743 AGDHIGFSFGVVQPPAMVAACGGTGGFG------------------------------DH 654
+ D IG +FG + P ++ A GG GG H
Sbjct: 185 SPD-IGLNFGGILP-SVGATAGGGGGVEFQMENSTSSNSVGGSVLSSGLVEQWRLQQVQH 242
Query: 653 R-QQFPFLAGLEPPSAAGMYKFQ--------------SEVCDFS--DQISVVTFEENQEL 525
+ QQ+PFL+ LEP S G+Y F+ S D + Q++ V E NQ L
Sbjct: 243 QVQQYPFLSNLEPSS--GLYSFEGGGIGPSNYAGQIRSRPLDSTGVSQLASVKMEGNQGL 300
Query: 524 INLPKKFLGFPGNDQ 480
NL + FLG GNDQ
Sbjct: 301 -NLSRNFLGISGNDQ 314
Score = 23.9 bits (50), Expect(2) = 1e-45
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 457 NALTGINGFTSSSASNFL 404
NA T + GFTSSS S+ L
Sbjct: 320 NAWTDLPGFTSSSTSHLL 337