BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033467
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ...   100   2e-20
ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi...   101   2e-19
ref|XP_002533966.1| pentatricopeptide repeat-containing protein,...    92   2e-18
ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containi...    86   6e-15
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-14

>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522763|gb|AET03217.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  100 bits (250), Expect(2) = 2e-20
 Identities = 42/77 (54%), Positives = 60/77 (77%)
 Frame = +2

Query: 161 RLLEEKFISLLQSCKNQNHLQRVHAQIITHGIEFNDFIVP*FISICSQVKKMIQSRLLFD 340
           R++EEKFI+LL+SCKN   L ++ AQI+THG+E NDF+ P FI+ CS+ K++  +R LFD
Sbjct: 9   RIVEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFD 68

Query: 341 QIPDPSSTLWNTMFKGY 391
           +IP P++  WN MF+GY
Sbjct: 69  KIPQPNTATWNAMFRGY 85



 Score = 24.3 bits (51), Expect(2) = 2e-20
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 384 KGILQNEIYGHAMGFFTHMNNMDVRHNYFMFPMVL 488
           +G LQN  +   +  F  +N +    N F FPM++
Sbjct: 83  RGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMII 117


>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 623

 Score =  101 bits (251), Expect = 2e-19
 Identities = 44/86 (51%), Positives = 62/86 (72%)
 Frame = +2

Query: 155 PLRLLEEKFISLLQSCKNQNHLQRVHAQIITHGIEFNDFIVP*FISICSQVKKMIQSRLL 334
           P RLLEE+FISLLQSCK    + ++ AQII +G ++N++I P  ++IC+ +K+M  +R L
Sbjct: 33  PHRLLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQL 92

Query: 335 FDQIPDPSSTLWNTMFKGYFAERDLR 412
           FDQIPDP+  LWN+MF+GY      R
Sbjct: 93  FDQIPDPNIALWNSMFRGYAQSESYR 118


>ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526049|gb|EEF28413.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 515

 Score = 92.0 bits (227), Expect(2) = 2e-18
 Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = +2

Query: 122 IANITFNLASK-PLRLLEEKFISLLQSCKNQNHLQRVHAQIITHGIEFNDFIVP*FISIC 298
           +A     L+ K P RLLEEK ISLL SCK  NHL ++ + II HG++FND+I P  I+  
Sbjct: 49  VAKFASTLSPKLPHRLLEEKIISLLYSCKTLNHLHQIQSHIINHGLQFNDYITPKIITSF 108

Query: 299 SQVKKMIQSRLLFDQIPDPSSTLWNTMFKGY 391
           +  K+M  +  LFDQIP+P+ + WN M KGY
Sbjct: 109 ALFKRMRHAHKLFDQIPEPNVSNWNAMLKGY 139



 Score = 26.2 bits (56), Expect(2) = 2e-18
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 384 KGILQNEIYGHAMGFFTHMNNMDVRHNYFMFPMVL 488
           KG   N+ +   +  F  M +MD+  N F FP+V+
Sbjct: 137 KGYSLNDSHREVIVLFRKMISMDILPNCFSFPIVI 171


>ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 619

 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 39/91 (42%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = +2

Query: 122 IANITFNLASKPL-RLLEEKFISLLQSCKNQNHLQRVHAQIITHGIEFNDFIVP*FISIC 298
           I  +  N  SKPL R++E+KFISLL++C     L ++ AQI+THG+E ND++ P FI+ C
Sbjct: 5   IGKLAVNQTSKPLHRVVEDKFISLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFITAC 64

Query: 299 SQVKKMIQSRLLFDQIPDPSSTLWNTMFKGY 391
           +++  + ++R +FD+   P+   WN MF+GY
Sbjct: 65  ARLGGIRRARRVFDKTAQPNGATWNAMFRGY 95


>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like, partial [Cucumis sativus]
          Length = 610

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 39/88 (44%), Positives = 56/88 (63%)
 Frame = +2

Query: 131 ITFNLASKPLRLLEEKFISLLQSCKNQNHLQRVHAQIITHGIEFNDFIVP*FISICSQVK 310
           + ++    P  +LEE FISLL+SCK    LQ+V AQIITHG ++N ++ P  ++    +K
Sbjct: 12  LLYSAQKHPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLK 71

Query: 311 KMIQSRLLFDQIPDPSSTLWNTMFKGYF 394
           +M  +R LFD  PDP   LWN + +GYF
Sbjct: 72  QMAHARHLFDHFPDPKVELWNAISRGYF 99