BLASTX nr result
ID: Panax21_contig00033458
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033458 (478 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256... 115 4e-24 ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|2... 95 7e-18 dbj|BAF76883.1| H2B histone-fold-like protein [Nicotiana tabacum] 81 1e-13 ref|XP_002522235.1| conserved hypothetical protein [Ricinus comm... 70 1e-10 >ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256599 [Vitis vinifera] gi|297740528|emb|CBI30710.3| unnamed protein product [Vitis vinifera] Length = 262 Score = 115 bits (288), Expect = 4e-24 Identities = 76/163 (46%), Positives = 87/163 (53%), Gaps = 4/163 (2%) Frame = +1 Query: 1 GPSLLASRRGHGQVTTLSIRVDGNRSGRPSLRTSASGRFRKSDGEKIPQSSDG---NSSN 171 G S ASRR +T SI+ DGNR GRP + SGR K D K P SSDG SSN Sbjct: 38 GFSPFASRRDLLPLTISSIKSDGNRRGRPPRKNHISGRTEKGDKNKTPPSSDGKLSESSN 97 Query: 172 QEEIISLFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEVLRQSRKQVKAKTLNERG 351 Q+EII+LFRR VLE+LRQSRKQVK + + G Sbjct: 98 QDEIIALFRRIQSSISKGESLGTKKRISDSSVDKTSAESVLEILRQSRKQVKGRPSKKEG 157 Query: 352 EKVLAIRRG-QLKNEDKADYPSVPDLKFTRPPSNFVKRSPIPS 477 +VL RRG K++ D V DLK RPPSNFVKRSPIPS Sbjct: 158 GQVLTQRRGVPKKDQGIPDKQYVADLKSARPPSNFVKRSPIPS 200 >ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|222859882|gb|EEE97429.1| predicted protein [Populus trichocarpa] Length = 264 Score = 94.7 bits (234), Expect = 7e-18 Identities = 61/162 (37%), Positives = 78/162 (48%), Gaps = 3/162 (1%) Frame = +1 Query: 1 GPSLLASRRGHGQVTTLSIRVDGNRSGRPSLRTSASGRFRKSDGEKIPQSSDGN---SSN 171 G AS G Q + SI+ DG+ GRP ++SA GR K D + QSSD SSN Sbjct: 39 GSLAFASHNGVLQFSVSSIKSDGSSKGRPPRKSSAPGRTEKEDEDSKSQSSDRKQPMSSN 98 Query: 172 QEEIISLFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEVLRQSRKQVKAKTLNERG 351 Q EI++LFRR +LEVLR S K K + G Sbjct: 99 QAEIMALFRRIQSSISKGESTATKKKKASRSNENSPTNSILEVLRHSTKHAKGPSTVREG 158 Query: 352 EKVLAIRRGQLKNEDKADYPSVPDLKFTRPPSNFVKRSPIPS 477 KVL +R K++ ++ D+K TRPPSNF K+SPIPS Sbjct: 159 NKVLTQKRSVSKDQKTQAEHALEDVKLTRPPSNFTKKSPIPS 200 >dbj|BAF76883.1| H2B histone-fold-like protein [Nicotiana tabacum] Length = 216 Score = 80.9 bits (198), Expect = 1e-13 Identities = 56/148 (37%), Positives = 72/148 (48%), Gaps = 3/148 (2%) Frame = +1 Query: 43 TTLSIRVDGNRSGRPSLRTSASGRFRKSDGEKI---PQSSDGNSSNQEEIISLFRRXXXX 213 T +IR +G+R R S + + G+ K D I P S NS NQEEIISLF+R Sbjct: 37 TLSTIRAEGSRR-RKSSKDATPGKTSKGDEIDIQSSPDSKSSNSLNQEEIISLFKRIQSS 95 Query: 214 XXXXXXXXXXXXXXXXXXXXXXXXXVLEVLRQSRKQVKAKTLNERGEKVLAIRRGQLKNE 393 VLE+LR S+ + K T N +G+K +RGQ E Sbjct: 96 ISKGDSLSSKKRSTKSSEEKPTIDSVLEILRHSKTESKGTTSNTKGDKGSTHQRGQ--KE 153 Query: 394 DKADYPSVPDLKFTRPPSNFVKRSPIPS 477 K DY D + TRPPS+FVKRSP+ S Sbjct: 154 HKTDYSPTLDPRSTRPPSSFVKRSPLQS 181 >ref|XP_002522235.1| conserved hypothetical protein [Ricinus communis] gi|223538488|gb|EEF40093.1| conserved hypothetical protein [Ricinus communis] Length = 289 Score = 70.5 bits (171), Expect = 1e-10 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 3/162 (1%) Frame = +1 Query: 1 GPSLLASRRGHGQVTTLSIRVDGNRSGRPSLRTSASGRFRKSDGEKIPQSSDG---NSSN 171 GPS + ++ Q++ + + DG+R GR ++S+ G+ +K D + Q SDG S Sbjct: 65 GPSTFSWQKRVLQLSISNTKSDGSRRGRSPRKSSSPGKRKKEDKSEKYQFSDGKLPRSPE 124 Query: 172 QEEIISLFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEVLRQSRKQVKAKTLNERG 351 ++EII+LFRR +LE LRQSRK VK + + Sbjct: 125 KDEIIALFRRIHSSISKGEAKSTQQTDINFSEDKSPTESILEALRQSRKPVKGREQDRVS 184 Query: 352 EKVLAIRRGQLKNEDKADYPSVPDLKFTRPPSNFVKRSPIPS 477 + + + K ++ A + + FTRPPS F++RSPI S Sbjct: 185 MQKRGVPKEGPKLQNNAQHMAA-KFNFTRPPSKFIRRSPISS 225