BLASTX nr result

ID: Panax21_contig00033458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033458
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256...   115   4e-24
ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
dbj|BAF76883.1| H2B histone-fold-like protein [Nicotiana tabacum]      81   1e-13
ref|XP_002522235.1| conserved hypothetical protein [Ricinus comm...    70   1e-10

>ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256599 [Vitis vinifera]
           gi|297740528|emb|CBI30710.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  115 bits (288), Expect = 4e-24
 Identities = 76/163 (46%), Positives = 87/163 (53%), Gaps = 4/163 (2%)
 Frame = +1

Query: 1   GPSLLASRRGHGQVTTLSIRVDGNRSGRPSLRTSASGRFRKSDGEKIPQSSDG---NSSN 171
           G S  ASRR    +T  SI+ DGNR GRP  +   SGR  K D  K P SSDG    SSN
Sbjct: 38  GFSPFASRRDLLPLTISSIKSDGNRRGRPPRKNHISGRTEKGDKNKTPPSSDGKLSESSN 97

Query: 172 QEEIISLFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEVLRQSRKQVKAKTLNERG 351
           Q+EII+LFRR                             VLE+LRQSRKQVK +   + G
Sbjct: 98  QDEIIALFRRIQSSISKGESLGTKKRISDSSVDKTSAESVLEILRQSRKQVKGRPSKKEG 157

Query: 352 EKVLAIRRG-QLKNEDKADYPSVPDLKFTRPPSNFVKRSPIPS 477
            +VL  RRG   K++   D   V DLK  RPPSNFVKRSPIPS
Sbjct: 158 GQVLTQRRGVPKKDQGIPDKQYVADLKSARPPSNFVKRSPIPS 200


>ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|222859882|gb|EEE97429.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 61/162 (37%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
 Frame = +1

Query: 1   GPSLLASRRGHGQVTTLSIRVDGNRSGRPSLRTSASGRFRKSDGEKIPQSSDGN---SSN 171
           G    AS  G  Q +  SI+ DG+  GRP  ++SA GR  K D +   QSSD     SSN
Sbjct: 39  GSLAFASHNGVLQFSVSSIKSDGSSKGRPPRKSSAPGRTEKEDEDSKSQSSDRKQPMSSN 98

Query: 172 QEEIISLFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEVLRQSRKQVKAKTLNERG 351
           Q EI++LFRR                             +LEVLR S K  K  +    G
Sbjct: 99  QAEIMALFRRIQSSISKGESTATKKKKASRSNENSPTNSILEVLRHSTKHAKGPSTVREG 158

Query: 352 EKVLAIRRGQLKNEDKADYPSVPDLKFTRPPSNFVKRSPIPS 477
            KVL  +R   K++      ++ D+K TRPPSNF K+SPIPS
Sbjct: 159 NKVLTQKRSVSKDQKTQAEHALEDVKLTRPPSNFTKKSPIPS 200


>dbj|BAF76883.1| H2B histone-fold-like protein [Nicotiana tabacum]
          Length = 216

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 56/148 (37%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
 Frame = +1

Query: 43  TTLSIRVDGNRSGRPSLRTSASGRFRKSDGEKI---PQSSDGNSSNQEEIISLFRRXXXX 213
           T  +IR +G+R  R S + +  G+  K D   I   P S   NS NQEEIISLF+R    
Sbjct: 37  TLSTIRAEGSRR-RKSSKDATPGKTSKGDEIDIQSSPDSKSSNSLNQEEIISLFKRIQSS 95

Query: 214 XXXXXXXXXXXXXXXXXXXXXXXXXVLEVLRQSRKQVKAKTLNERGEKVLAIRRGQLKNE 393
                                    VLE+LR S+ + K  T N +G+K    +RGQ   E
Sbjct: 96  ISKGDSLSSKKRSTKSSEEKPTIDSVLEILRHSKTESKGTTSNTKGDKGSTHQRGQ--KE 153

Query: 394 DKADYPSVPDLKFTRPPSNFVKRSPIPS 477
            K DY    D + TRPPS+FVKRSP+ S
Sbjct: 154 HKTDYSPTLDPRSTRPPSSFVKRSPLQS 181


>ref|XP_002522235.1| conserved hypothetical protein [Ricinus communis]
           gi|223538488|gb|EEF40093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 289

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
 Frame = +1

Query: 1   GPSLLASRRGHGQVTTLSIRVDGNRSGRPSLRTSASGRFRKSDGEKIPQSSDG---NSSN 171
           GPS  + ++   Q++  + + DG+R GR   ++S+ G+ +K D  +  Q SDG    S  
Sbjct: 65  GPSTFSWQKRVLQLSISNTKSDGSRRGRSPRKSSSPGKRKKEDKSEKYQFSDGKLPRSPE 124

Query: 172 QEEIISLFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEVLRQSRKQVKAKTLNERG 351
           ++EII+LFRR                             +LE LRQSRK VK +  +   
Sbjct: 125 KDEIIALFRRIHSSISKGEAKSTQQTDINFSEDKSPTESILEALRQSRKPVKGREQDRVS 184

Query: 352 EKVLAIRRGQLKNEDKADYPSVPDLKFTRPPSNFVKRSPIPS 477
            +   + +   K ++ A + +     FTRPPS F++RSPI S
Sbjct: 185 MQKRGVPKEGPKLQNNAQHMAA-KFNFTRPPSKFIRRSPISS 225


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