BLASTX nr result

ID: Panax21_contig00033453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033453
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18190.3| unnamed protein product [Vitis vinifera]               99   3e-19
emb|CAN81434.1| hypothetical protein VITISV_010699 [Vitis vinifera]    99   3e-19
ref|XP_002526845.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
ref|XP_002327231.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_003548950.1| PREDICTED: uncharacterized protein LOC100797...    75   6e-12

>emb|CBI18190.3| unnamed protein product [Vitis vinifera]
          Length = 869

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 62/141 (43%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
 Frame = +2

Query: 32  VSQTKDTDRPLITSEQRSGVSSIWSRRGKSTSV-QILTDKQKVDNSGVITDTEVELLYKE 208
           +S  ++ + P +  EQ+S + +IWSRRGK  SV QI T +      G     ++    +E
Sbjct: 388 LSDDENPESPPVRLEQKSSLPNIWSRRGKPASVLQIQTGRSTRKCIGDGNGAKIRKPKQE 447

Query: 209 NMENESNSKALFSSVDGDEGEIFTPDKENFIPNSLLLRSM-KKTNKVEEIKQSMTLRLSP 385
           ++EN+  S+ALF  +DG+E EIFTP+KENF PN+LLL+S+ KK   +EE KQS   R S 
Sbjct: 448 DLENKPISRALFPMLDGEETEIFTPNKENFSPNTLLLKSVNKKKGILEETKQSTLCRSSS 507

Query: 386 LKNSFGHNIDPEEDIVASSDK 448
            K S G N   EED    SDK
Sbjct: 508 SKFSTGPNKCSEEDTSTFSDK 528


>emb|CAN81434.1| hypothetical protein VITISV_010699 [Vitis vinifera]
          Length = 828

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 62/141 (43%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
 Frame = +2

Query: 32  VSQTKDTDRPLITSEQRSGVSSIWSRRGKSTSV-QILTDKQKVDNSGVITDTEVELLYKE 208
           +S  ++ + P +  EQ+S + +IWSRRGK  SV QI T +      G     ++    +E
Sbjct: 388 LSDDENPESPPVRLEQKSSLPNIWSRRGKPASVLQIQTGRSTRKCIGDGNGAKIRKPKQE 447

Query: 209 NMENESNSKALFSSVDGDEGEIFTPDKENFIPNSLLLRSM-KKTNKVEEIKQSMTLRLSP 385
           ++EN+  S+ALF  +DG+E EIFTP+KENF PN+LLL+S+ KK   +EE KQS   R S 
Sbjct: 448 DLENKPISRALFPMLDGEETEIFTPNKENFSPNTLLLKSVNKKKGILEETKQSTLCRSSS 507

Query: 386 LKNSFGHNIDPEEDIVASSDK 448
            K S G N   EED    SDK
Sbjct: 508 SKFSTGPNKCSEEDTSTFSDK 528


>ref|XP_002526845.1| conserved hypothetical protein [Ricinus communis]
           gi|223533849|gb|EEF35580.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 789

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 60/140 (42%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
 Frame = +2

Query: 32  VSQTKDTDRPLITSEQRSGVSSIWSRRGK-STSVQILTDKQKVDNSGVITDTEVELLYKE 208
           +   ++   P I SE++S   +IWSRRGK  T +Q+ T K    N  V  D ++E   +E
Sbjct: 325 IENLENIGSPPIRSEKKSSSCNIWSRRGKPDTPLQLQTSKSGKKNRRVNIDADIEWENQE 384

Query: 209 NMENESNSKALFSSVDGDEGEIFTPDKENFIPNSLLLRSMKKTNKVEEIKQSMTLRLSPL 388
           ++E++S ++ALFS +   + EIFTPDKEN  PNS  LR  +K  ++E+I QS   R S  
Sbjct: 385 DVESKSITRALFSGLQPMDEEIFTPDKENHTPNS-FLRKFRKKGQLEDI-QSPKFRYS-- 440

Query: 389 KNSFGHNIDPEEDIVASSDK 448
           K +F  +I P+EDI+ASSDK
Sbjct: 441 KITFSSSIGPDEDIIASSDK 460


>ref|XP_002327231.1| predicted protein [Populus trichocarpa] gi|222835601|gb|EEE74036.1|
           predicted protein [Populus trichocarpa]
          Length = 1079

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/129 (41%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = +2

Query: 65  ITSEQRSGVSSIWSRRGKSTSV-QILTDKQKVDNSGVITDTEVELLYKENMENESNSKAL 241
           + SE++    +IWSRRGK  +V Q+ T + +  N G     +VE   +EN+EN S SK +
Sbjct: 614 VRSEKKQSSRNIWSRRGKPKAVLQLQTSRSREKNRG----DDVEWENQENIENRSISKTI 669

Query: 242 FSSVDGDEGEIFTPDKENFIPNSLLLRSMKKTNKVEEIKQSMTLRLSPLKNSFGHNIDPE 421
           F   +  E E+ TP KEN+ PN+LLL+S+KK  K EE + S + R +  K +F     PE
Sbjct: 670 FPGSEAAE-EVLTPGKENYSPNTLLLKSLKKKGKREETQLSNSRRSTSSKIAFSPYKQPE 728

Query: 422 EDIVASSDK 448
           E+++AS DK
Sbjct: 729 EEMIASPDK 737


>ref|XP_003548950.1| PREDICTED: uncharacterized protein LOC100797723 [Glycine max]
          Length = 1198

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
 Frame = +2

Query: 29  NVSQTKDTDRPLITS---EQRSGVSSIWSRRGKSTSV-QILTDKQKVDNSGVITDTEVEL 196
           N  QT+ +D   + S         ++IWSRRGK+TS  Q+ T K  + N+    + EV +
Sbjct: 507 NEDQTQHSDMENLESCIKAMEKTSTNIWSRRGKATSAPQVRTSKSILKNAA---NVEVAM 563

Query: 197 LYKENMENESNSKALFSSVDG----DEGEIFTPDKENFIPNSLLLRSMKKTNKVEEIKQS 364
             ++++ N + SK L S +DG    D+ EI+TPDKEN  PN+L LR +KK  K+E IK S
Sbjct: 564 SNEKDIRNRTISKNLSSVLDGEVEEDDEEIYTPDKENISPNTLHLRFLKK-GKIEGIKHS 622

Query: 365 MTLRLSP-LKNSFGHNIDPEEDI 430
            + R    L+++F  +I P E I
Sbjct: 623 KSQRSRHILRDTFNCDIYPNESI 645



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = +2

Query: 218 NESNSKALFSSVDGDEGE-IFTPDKENFIPNSLLLRSMKKTNKVEEIKQSMTLRLSPLKN 394
           N + S+ LFS ++G+E E IFTPDKENF PN+L LR +KK  KVEEIK S + R    K 
Sbjct: 736 NRTISRDLFSDLEGEEEEEIFTPDKENFSPNTLHLRLLKKKGKVEEIKHSKSQRSPLSKG 795

Query: 395 SFGHNIDPEEDI 430
           +F  ++ P E I
Sbjct: 796 TFNPDMYPNESI 807



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
 Frame = +2

Query: 227 NSKALFSSVDGD--EGEIFTPDKENFIPNSLLLRSMKKTNKVEEIKQSMTLRLSPLKNSF 400
           N K LFS +DG+  E EIF P++EN  PN+L LR +KK  KVEEIK+S + R    K +F
Sbjct: 653 NKKDLFSVLDGEVKEKEIFIPEEENLNPNALQLRLLKKKGKVEEIKRSKSRRSPLSKGTF 712

Query: 401 GHNIDPEEDI 430
             ++ P E+I
Sbjct: 713 NPDMYPNENI 722


Top