BLASTX nr result

ID: Panax21_contig00033451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033451
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34891.3| unnamed protein product [Vitis vinifera]               68   3e-27
ref|XP_002276200.2| PREDICTED: isocitrate dehydrogenase [NADP]-l...    68   3e-27
ref|XP_002524672.1| NADP-specific isocitrate dehydrogenase, puta...    68   2e-26
ref|XP_003525669.1| PREDICTED: isocitrate dehydrogenase [NADP], ...    68   6e-26
dbj|BAC77065.1| NADP-specific isocitrate dehydrogenase [Lupinus ...    68   8e-26

>emb|CBI34891.3| unnamed protein product [Vitis vinifera]
          Length = 540

 Score = 68.2 bits (165), Expect(3) = 3e-27
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +3

Query: 141 SIRCFAESSMSLAFAKKWPLYLSTNNTILKKYDGK 245
           SIR FAESSMSLAFAKKWPLYLST NTILKKYDG+
Sbjct: 311 SIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGR 345



 Score = 61.6 bits (148), Expect(3) = 3e-27
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +2

Query: 335 RFKDIF*EVYEQNWKQKFEKHSIWYEHRL 421
           RFKDIF +VYE+NWKQKFE+HSIWYEHRL
Sbjct: 345 RFKDIFQDVYEENWKQKFEEHSIWYEHRL 373



 Score = 37.4 bits (85), Expect(3) = 3e-27
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +1

Query: 1   VYDFKGPDIAFAMYNVDE 54
           VYDFKGP IA AMYNVDE
Sbjct: 293 VYDFKGPGIALAMYNVDE 310


>ref|XP_002276200.2| PREDICTED: isocitrate dehydrogenase [NADP]-like [Vitis vinifera]
          Length = 486

 Score = 68.2 bits (165), Expect(3) = 3e-27
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +3

Query: 141 SIRCFAESSMSLAFAKKWPLYLSTNNTILKKYDGK 245
           SIR FAESSMSLAFAKKWPLYLST NTILKKYDG+
Sbjct: 257 SIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGR 291



 Score = 61.6 bits (148), Expect(3) = 3e-27
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +2

Query: 335 RFKDIF*EVYEQNWKQKFEKHSIWYEHRL 421
           RFKDIF +VYE+NWKQKFE+HSIWYEHRL
Sbjct: 291 RFKDIFQDVYEENWKQKFEEHSIWYEHRL 319



 Score = 37.4 bits (85), Expect(3) = 3e-27
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +1

Query: 1   VYDFKGPDIAFAMYNVDE 54
           VYDFKGP IA AMYNVDE
Sbjct: 239 VYDFKGPGIALAMYNVDE 256


>ref|XP_002524672.1| NADP-specific isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223536033|gb|EEF37691.1| NADP-specific isocitrate
           dehydrogenase, putative [Ricinus communis]
          Length = 470

 Score = 68.2 bits (165), Expect(3) = 2e-26
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +3

Query: 141 SIRCFAESSMSLAFAKKWPLYLSTNNTILKKYDGK 245
           SIR FAESSMSLAFAKKWPLYLST NTILKKYDG+
Sbjct: 264 SIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGR 298



 Score = 60.5 bits (145), Expect(3) = 2e-26
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +2

Query: 335 RFKDIF*EVYEQNWKQKFEKHSIWYEHRL 421
           RFKDIF EVYE+ WKQKFE+HSIWYEHRL
Sbjct: 298 RFKDIFQEVYEEKWKQKFEEHSIWYEHRL 326



 Score = 35.8 bits (81), Expect(3) = 2e-26
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +1

Query: 1   VYDFKGPDIAFAMYNVDE 54
           VYDFKGP +A AMYNVD+
Sbjct: 246 VYDFKGPGVALAMYNVDQ 263


>ref|XP_003525669.1| PREDICTED: isocitrate dehydrogenase [NADP], chloroplastic-like
           [Glycine max]
          Length = 470

 Score = 68.2 bits (165), Expect(3) = 6e-26
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +3

Query: 141 SIRCFAESSMSLAFAKKWPLYLSTNNTILKKYDGK 245
           SIR FAESSMSLAFAKKWPLYLST NTILKKYDG+
Sbjct: 244 SIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGR 278



 Score = 59.3 bits (142), Expect(3) = 6e-26
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +2

Query: 335 RFKDIF*EVYEQNWKQKFEKHSIWYEHRL 421
           RFKDIF EVYE+ W+QKFE+HSIWYEHRL
Sbjct: 278 RFKDIFQEVYEERWRQKFEEHSIWYEHRL 306



 Score = 35.0 bits (79), Expect(3) = 6e-26
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +1

Query: 1   VYDFKGPDIAFAMYNVDE 54
           VY+FKGP +A AMYNVDE
Sbjct: 226 VYNFKGPGVALAMYNVDE 243


>dbj|BAC77065.1| NADP-specific isocitrate dehydrogenase [Lupinus albus]
          Length = 485

 Score = 68.2 bits (165), Expect(3) = 8e-26
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +3

Query: 141 SIRCFAESSMSLAFAKKWPLYLSTNNTILKKYDGK 245
           SIR FAESSMSLAFAKKWPLYLST NTILKKYDG+
Sbjct: 258 SIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGR 292



 Score = 57.4 bits (137), Expect(3) = 8e-26
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +2

Query: 335 RFKDIF*EVYEQNWKQKFEKHSIWYEHRL 421
           RFKDIF EVYE+ W+Q FE+HSIWYEHRL
Sbjct: 292 RFKDIFQEVYEERWRQNFEEHSIWYEHRL 320



 Score = 36.6 bits (83), Expect(3) = 8e-26
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +1

Query: 1   VYDFKGPDIAFAMYNVDE 54
           VYDFKGP +A AMYN+DE
Sbjct: 240 VYDFKGPGVALAMYNIDE 257


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