BLASTX nr result
ID: Panax21_contig00033436
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033436 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 74 2e-13 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 74 3e-13 ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2... 72 5e-13 ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-13 ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcript... 74 1e-11 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 74.3 bits (181), Expect(2) = 2e-13 Identities = 28/67 (41%), Positives = 45/67 (67%) Frame = +3 Query: 231 QWHKLIWNKLHIPRYSFIMWLAIIQKLQTLDQIVQYSHNVDPSCVLCIHNTGSHAHLFFE 410 +WH ++W K +PR+SF++W+A+ QKL T D++ ++ + C LC+ N H HLFFE Sbjct: 1214 EWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFE 1273 Query: 411 CEFSHAI 431 C ++ AI Sbjct: 1274 CSYTKAI 1280 Score = 25.8 bits (55), Expect(2) = 2e-13 Identities = 14/72 (19%), Positives = 30/72 (41%) Frame = +1 Query: 7 SRIGPKARVKGILSADGWQLPSSNHRIMIQFRQSFDFSINFNVNSKDKITWGSSRMSKVT 186 S + A+V ++ W+ P++ ++ + N + KD+I W S + Sbjct: 1139 SGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFL 1198 Query: 187 DAIIWQTIRSKR 222 + W+ +R R Sbjct: 1199 VKVAWEHLRRHR 1210 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 73.6 bits (179), Expect(2) = 3e-13 Identities = 28/67 (41%), Positives = 45/67 (67%) Frame = +3 Query: 231 QWHKLIWNKLHIPRYSFIMWLAIIQKLQTLDQIVQYSHNVDPSCVLCIHNTGSHAHLFFE 410 +WH ++W K +PR+SF++W+A+ QKL T D++ ++ + C LC+ N H HLFFE Sbjct: 341 EWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFE 400 Query: 411 CEFSHAI 431 C ++ AI Sbjct: 401 CSYTKAI 407 Score = 26.2 bits (56), Expect(2) = 3e-13 Identities = 13/72 (18%), Positives = 31/72 (43%) Frame = +1 Query: 7 SRIGPKARVKGILSADGWQLPSSNHRIMIQFRQSFDFSINFNVNSKDKITWGSSRMSKVT 186 S + A+V ++ W+ P++ ++ + N + KD++ W S + + Sbjct: 266 SGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFS 325 Query: 187 DAIIWQTIRSKR 222 + W+ +R R Sbjct: 326 VKVAWEQLRRHR 337 >ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1| predicted protein [Populus trichocarpa] Length = 331 Score = 72.0 bits (175), Expect(2) = 5e-13 Identities = 27/67 (40%), Positives = 44/67 (65%) Frame = +3 Query: 231 QWHKLIWNKLHIPRYSFIMWLAIIQKLQTLDQIVQYSHNVDPSCVLCIHNTGSHAHLFFE 410 +WH ++W K +PR+SF++W+ + QKL T D++ ++ + C LC+ N H HLFFE Sbjct: 159 EWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFE 218 Query: 411 CEFSHAI 431 C ++ AI Sbjct: 219 CSYTKAI 225 Score = 26.9 bits (58), Expect(2) = 5e-13 Identities = 14/72 (19%), Positives = 31/72 (43%) Frame = +1 Query: 7 SRIGPKARVKGILSADGWQLPSSNHRIMIQFRQSFDFSINFNVNSKDKITWGSSRMSKVT 186 S + A+V ++ W+ P++ ++ + N + KD+I W S + + Sbjct: 84 SGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFS 143 Query: 187 DAIIWQTIRSKR 222 + W+ +R R Sbjct: 144 VKVAWEQLRRHR 155 >ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1| predicted protein [Populus trichocarpa] Length = 1046 Score = 72.0 bits (175), Expect(2) = 6e-13 Identities = 27/67 (40%), Positives = 44/67 (65%) Frame = +3 Query: 231 QWHKLIWNKLHIPRYSFIMWLAIIQKLQTLDQIVQYSHNVDPSCVLCIHNTGSHAHLFFE 410 +WH ++W K +PR+SF++W+ + QKL T D++ ++ + C LC+ N H HLFFE Sbjct: 874 EWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFE 933 Query: 411 CEFSHAI 431 C ++ AI Sbjct: 934 CSYTKAI 940 Score = 26.6 bits (57), Expect(2) = 6e-13 Identities = 14/72 (19%), Positives = 31/72 (43%) Frame = +1 Query: 7 SRIGPKARVKGILSADGWQLPSSNHRIMIQFRQSFDFSINFNVNSKDKITWGSSRMSKVT 186 S + A+V ++ W+ P++ ++ + N + KD+I W S + + Sbjct: 799 SGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFS 858 Query: 187 DAIIWQTIRSKR 222 + W+ +R R Sbjct: 859 VKVAWEQLRRHR 870 >ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcriptase)-related family protein [Arabidopsis thaliana] gi|332005241|gb|AED92624.1| RNA-directed DNA polymerase (reverse transcriptase)-related family protein [Arabidopsis thaliana] Length = 295 Score = 73.9 bits (180), Expect = 1e-11 Identities = 31/71 (43%), Positives = 47/71 (66%) Frame = +3 Query: 219 TPPAQWHKLIWNKLHIPRYSFIMWLAIIQKLQTLDQIVQYSHNVDPSCVLCIHNTGSHAH 398 +P W K++W K +IPR+S I W++ +++L T D++ + N+ S VLC + +HAH Sbjct: 122 SPTVPWAKVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSSWVLCSNGDETHAH 181 Query: 399 LFFECEFSHAI 431 LFFEC FS AI Sbjct: 182 LFFECSFSLAI 192