BLASTX nr result
ID: Panax21_contig00033429
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00033429
(412 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16176.3| unnamed protein product [Vitis vinifera] 216 1e-54
ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat... 216 1e-54
ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|2... 210 8e-53
ref|NP_200798.1| pentatricopeptide repeat-containing protein [Ar... 182 2e-44
ref|XP_002866357.1| pentatricopeptide repeat-containing protein ... 177 8e-43
>emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 216 bits (551), Expect = 1e-54
Identities = 102/137 (74%), Positives = 117/137 (85%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CKDGKL+EAE L+ +MG KGL PND+TYSI+ID+FC+RGKL+ AL F G+M G+KATV
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATV 425
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YPY+SLISGHC LGKLR A+S F EMI GL P VV YTSLI+GYCKE E+HNAFRLYHE
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485
Query: 362 MTGKGIAPNTYTFTALI 412
MTGKGI+PNTYTFTALI
Sbjct: 486 MTGKGISPNTYTFTALI 502
Score = 112 bits (279), Expect = 4e-23
Identities = 54/137 (39%), Positives = 77/137 (56%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK GKL A+ L+ +M GL PN + Y+ +I +C+ G+L+ A + M G+
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y + +LISG C+ ++ A FGEM+ + P VTY LI G+CKE AF L E
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555
Query: 362 MTGKGIAPNTYTFTALI 412
M KG+ P+TYT+ LI
Sbjct: 556 MVEKGLVPDTYTYRPLI 572
Score = 90.9 bits (224), Expect = 1e-16
Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK+G+L A LY +M KG+ PN T++ +I C ++ A FG M V
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YN LI GHC G A EM+ +GL P TY LI+G C V A ++
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590
Query: 362 MTG--------KGIAPNTYTFTALI 412
+ G +G PN T+TALI
Sbjct: 591 LQGEQQKLNEIEGCLPNVVTYTALI 615
Score = 85.5 bits (210), Expect = 4e-15
Identities = 43/137 (31%), Positives = 73/137 (53%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK G +++AELL R+M PN TY+ +D G + A+ + + G A
Sbjct: 619 CKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHD-VLLEGFLANT 677
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YN LI G C LG+++ A MI+ G++P ++Y+++I YC+ ++ A +L+
Sbjct: 678 VTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWES 737
Query: 362 MTGKGIAPNTYTFTALI 412
M +G+ P+T + LI
Sbjct: 738 MLNRGVNPDTVAYNFLI 754
Score = 82.0 bits (201), Expect = 4e-14
Identities = 45/137 (32%), Positives = 73/137 (53%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK + E E + +M G P++ S ++D ++G + +A ++K GV ++
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
+ YN+LI+ C GKL AES F M ++GL P VTY+ LI +CK ++ A +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 362 MTGKGIAPNTYTFTALI 412
MT GI Y +++LI
Sbjct: 416 MTEVGIKATVYPYSSLI 432
Score = 80.5 bits (197), Expect = 1e-13
Identities = 44/135 (32%), Positives = 73/135 (54%)
Frame = +2
Query: 8 DGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYP 187
+G +E+A L+ D+ +G N +TY+I+I FC+ G++ A M +G+
Sbjct: 656 EGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCIS 714
Query: 188 YNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMT 367
Y+++I +C G L+ A + M+N+G+ P V Y LI G C E+ AF L +M
Sbjct: 715 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMM 774
Query: 368 GKGIAPNTYTFTALI 412
+G+ PN T+ +LI
Sbjct: 775 RRGVKPNRATYNSLI 789
Score = 77.8 bits (190), Expect = 8e-13
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C ++ EA L+ +M + PN++TY+++I+ C+ G A M G+
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDT 565
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQ--------GLAPCVVTYTSLIAGYCKEKEVH 337
Y Y LISG C+ G++ A F ++ + G P VVTYT+LI G CK +
Sbjct: 566 YTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMD 625
Query: 338 NAFRLYHEMTGKGIAPNTYTFTALI 412
A L EM PN T+ +
Sbjct: 626 KAELLCREMLASNSLPNQNTYACFL 650
Score = 72.0 bits (175), Expect = 5e-11
Identities = 41/106 (38%), Positives = 57/106 (53%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK G+++EA + +M G+ P+ I+YS II +CRRG L A+ + M GV
Sbjct: 688 CKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 747
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYC 319
YN LI G C G+L A +M+ +G+ P TY SLI G C
Sbjct: 748 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793
Score = 62.4 bits (150), Expect = 4e-08
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMK-------- 157
CK+G A L +M KGL P+ TY +I C G+++ A F ++
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600
Query: 158 VAGVKATVYPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVH 337
+ G V Y +LI+G C +G + AE EM+ P TY + E +
Sbjct: 601 IEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 660
Query: 338 NAFRLYHEMTGKGIAPNTYTFTALI 412
A +L H++ +G NT T+ LI
Sbjct: 661 KAIQL-HDVLLEGFLANTVTYNILI 684
Score = 59.3 bits (142), Expect = 3e-07
Identities = 30/111 (27%), Positives = 56/111 (50%)
Frame = +2
Query: 80 TYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYPYNSLISGHCNLGKLRTAESFFGEM 259
TY++ I C+ ++ A+ + G++A V Y +L+ G C + + E EM
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311
Query: 260 INQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMTGKGIAPNTYTFTALI 412
I G P ++L+ G K+ + +AF L +++ G+AP+ + + ALI
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALI 362
>ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 216 bits (551), Expect = 1e-54
Identities = 102/137 (74%), Positives = 117/137 (85%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CKDGKL+EAE L+ +MG KGL PND+TYSI+ID+FC+RGKL+ AL F G+M G+KATV
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATV 425
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YPY+SLISGHC LGKLR A+S F EMI GL P VV YTSLI+GYCKE E+HNAFRLYHE
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485
Query: 362 MTGKGIAPNTYTFTALI 412
MTGKGI+PNTYTFTALI
Sbjct: 486 MTGKGISPNTYTFTALI 502
Score = 112 bits (279), Expect = 4e-23
Identities = 54/137 (39%), Positives = 77/137 (56%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK GKL A+ L+ +M GL PN + Y+ +I +C+ G+L+ A + M G+
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y + +LISG C+ ++ A FGEM+ + P VTY LI G+CKE AF L E
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555
Query: 362 MTGKGIAPNTYTFTALI 412
M KG+ P+TYT+ LI
Sbjct: 556 MVEKGLVPDTYTYRPLI 572
Score = 86.7 bits (213), Expect = 2e-15
Identities = 47/137 (34%), Positives = 65/137 (47%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK+G+L A LY +M KG+ PN T++ +I C ++ A FG M V
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YN LI GHC G A EM+ +GL P TY LI+G C V A ++
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590
Query: 362 MTGKGIAPNTYTFTALI 412
+ G+ N F+AL+
Sbjct: 591 LQGEQQKLNEMCFSALL 607
Score = 85.5 bits (210), Expect = 4e-15
Identities = 43/137 (31%), Positives = 73/137 (53%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK G +++AELL R+M PN TY+ +D G + A+ + + G A
Sbjct: 716 CKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHD-VLLEGFLANT 774
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YN LI G C LG+++ A MI+ G++P ++Y+++I YC+ ++ A +L+
Sbjct: 775 VTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWES 834
Query: 362 MTGKGIAPNTYTFTALI 412
M +G+ P+T + LI
Sbjct: 835 MLNRGVNPDTVAYNFLI 851
Score = 82.0 bits (201), Expect = 4e-14
Identities = 45/137 (32%), Positives = 73/137 (53%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK + E E + +M G P++ S ++D ++G + +A ++K GV ++
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
+ YN+LI+ C GKL AES F M ++GL P VTY+ LI +CK ++ A +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 362 MTGKGIAPNTYTFTALI 412
MT GI Y +++LI
Sbjct: 416 MTEVGIKATVYPYSSLI 432
Score = 80.5 bits (197), Expect = 1e-13
Identities = 44/135 (32%), Positives = 73/135 (54%)
Frame = +2
Query: 8 DGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYP 187
+G +E+A L+ D+ +G N +TY+I+I FC+ G++ A M +G+
Sbjct: 753 EGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCIS 811
Query: 188 YNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMT 367
Y+++I +C G L+ A + M+N+G+ P V Y LI G C E+ AF L +M
Sbjct: 812 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMM 871
Query: 368 GKGIAPNTYTFTALI 412
+G+ PN T+ +LI
Sbjct: 872 RRGVKPNRATYNSLI 886
Score = 79.7 bits (195), Expect = 2e-13
Identities = 39/137 (28%), Positives = 70/137 (51%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C ++ EA L+ +M + PN++TY+++I+ C+ G A M G+
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDT 565
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y Y LISG C+ G++ A F ++ + + +++L+ GYCKE + +A E
Sbjct: 566 YTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACRE 625
Query: 362 MTGKGIAPNTYTFTALI 412
M G+G+A + ++ LI
Sbjct: 626 MLGRGVAMDLVCYSVLI 642
Score = 72.0 bits (175), Expect = 5e-11
Identities = 41/106 (38%), Positives = 57/106 (53%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK G+++EA + +M G+ P+ I+YS II +CRRG L A+ + M GV
Sbjct: 785 CKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 844
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYC 319
YN LI G C G+L A +M+ +G+ P TY SLI G C
Sbjct: 845 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890
Score = 69.3 bits (168), Expect = 3e-10
Identities = 39/137 (28%), Positives = 70/137 (51%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK+G A L +M KGL P+ TY +I C G+++ A F ++ K
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
+++L+ G+C G+L A EM+ +G+A +V Y+ LI G ++++ + L +
Sbjct: 601 MCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQ 660
Query: 362 MTGKGIAPNTYTFTALI 412
M +G+ P+ +T +I
Sbjct: 661 MHDQGLRPDNVLYTTMI 677
Score = 68.2 bits (165), Expect = 7e-10
Identities = 42/137 (30%), Positives = 66/137 (48%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C G++ EA D+ + N++ +S ++ +C+ G+L+ AL M GV +
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDL 635
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y+ LI G R+ +M +QGL P V YT++I K + AF L+
Sbjct: 636 VCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDI 695
Query: 362 MTGKGIAPNTYTFTALI 412
M +G PN T+TALI
Sbjct: 696 MVSEGCLPNVVTYTALI 712
Score = 67.0 bits (162), Expect = 1e-09
Identities = 39/137 (28%), Positives = 68/137 (49%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK+G+L++A R+M +G+ + + YS++I R+ + + +M G++
Sbjct: 611 CKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDN 670
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y ++I + G L+ A + M+++G P VVTYT+LI G CK + A L E
Sbjct: 671 VLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCRE 730
Query: 362 MTGKGIAPNTYTFTALI 412
M PN T+ +
Sbjct: 731 MLASNSLPNQNTYACFL 747
Score = 61.2 bits (147), Expect = 8e-08
Identities = 38/126 (30%), Positives = 59/126 (46%)
Frame = +2
Query: 35 LYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYPYNSLISGHC 214
L + M +GL P+++ Y+ +IDA + G L A + M G V Y +LI+G C
Sbjct: 657 LLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLC 716
Query: 215 NLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMTGKGIAPNTY 394
+G + AE EM+ P TY + E + A +L H++ +G NT
Sbjct: 717 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTV 775
Query: 395 TFTALI 412
T+ LI
Sbjct: 776 TYNILI 781
Score = 59.3 bits (142), Expect = 3e-07
Identities = 30/111 (27%), Positives = 56/111 (50%)
Frame = +2
Query: 80 TYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYPYNSLISGHCNLGKLRTAESFFGEM 259
TY++ I C+ ++ A+ + G++A V Y +L+ G C + + E EM
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311
Query: 260 INQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMTGKGIAPNTYTFTALI 412
I G P ++L+ G K+ + +AF L +++ G+AP+ + + ALI
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALI 362
>ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|222845629|gb|EEE83176.1|
predicted protein [Populus trichocarpa]
Length = 915
Score = 210 bits (535), Expect = 8e-53
Identities = 97/137 (70%), Positives = 117/137 (85%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CKDGK +EAELL+++MG KGL ND+TYSI+ID+FCRRGKL+TA+ F G+M +AG+K TV
Sbjct: 377 CKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITV 436
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YPYNSLI+GHC LG L A SFF EMI++GL P VV+YTSLI+GYC + ++H AFRLYHE
Sbjct: 437 YPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHE 496
Query: 362 MTGKGIAPNTYTFTALI 412
MTGKGIAPNTYTFT LI
Sbjct: 497 MTGKGIAPNTYTFTTLI 513
Score = 86.3 bits (212), Expect = 2e-15
Identities = 43/137 (31%), Positives = 70/137 (51%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK G +++AELL+++M PN +TY +D R G + A+ M + G+ A
Sbjct: 727 CKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANT 785
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YN L+ G C LG++ A EMI+ + P +TY+++I C+ + A +
Sbjct: 786 VSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDT 845
Query: 362 MTGKGIAPNTYTFTALI 412
M KG+ P+T + LI
Sbjct: 846 MLNKGLKPDTLAYNFLI 862
Score = 77.8 bits (190), Expect = 8e-13
Identities = 44/135 (32%), Positives = 70/135 (51%)
Frame = +2
Query: 5 KDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVY 184
++G +E+A L+ DM KGL N ++Y+I++ FC+ G++ A M +
Sbjct: 763 REGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCI 821
Query: 185 PYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEM 364
Y+++I C G L A F+ M+N+GL P + Y LI G C E+ AF L +M
Sbjct: 822 TYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDM 881
Query: 365 TGKGIAPNTYTFTAL 409
+G+ PN T +L
Sbjct: 882 IRRGVKPNQATHKSL 896
Score = 77.4 bits (189), Expect = 1e-12
Identities = 42/137 (30%), Positives = 62/137 (45%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C GKL EA LY +M KG+ PN T++ +I A R ++ A F M +
Sbjct: 482 CNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNE 541
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YN +I GHC G A +M+ +GL P TY LI+ C V A + +
Sbjct: 542 VTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDD 601
Query: 362 MTGKGIAPNTYTFTALI 412
+ + N ++AL+
Sbjct: 602 LHREHFKLNEMCYSALL 618
Score = 70.9 bits (172), Expect = 1e-10
Identities = 42/137 (30%), Positives = 67/137 (48%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK+G +A L M KGL P+ TY +I + C G++ A F + K
Sbjct: 552 CKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNE 611
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y++L+ G+C G+LR A EM+ +G+ +V Y LI G KE++ F L
Sbjct: 612 MCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKN 671
Query: 362 MTGKGIAPNTYTFTALI 412
M + + P+ +T++I
Sbjct: 672 MHDQRLRPDKVIYTSMI 688
Score = 69.7 bits (169), Expect = 2e-10
Identities = 42/104 (40%), Positives = 56/104 (53%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK G++EEA L +M + P+ ITYS II CRRG L+ A+ F+ M G+K
Sbjct: 796 CKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDT 855
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAG 313
YN LI G C G+L A +MI +G+ P T+ SL G
Sbjct: 856 LAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899
Score = 68.6 bits (166), Expect = 5e-10
Identities = 41/137 (29%), Positives = 65/137 (47%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK + E + +M G P + S +++ R+GK+ A R+K G ++
Sbjct: 307 CKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSL 366
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
+ YN+LI+ C GK AE F EM +GL VTY+ LI +C+ ++ A +
Sbjct: 367 FVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGK 426
Query: 362 MTGKGIAPNTYTFTALI 412
M GI Y + +LI
Sbjct: 427 MIMAGIKITVYPYNSLI 443
Score = 57.8 bits (138), Expect = 9e-07
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Frame = +2
Query: 8 DGKLEEAEL-----LYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVK 172
DG ++E + L ++M + L P+ + Y+ +ID + + G + A + M G
Sbjct: 654 DGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCT 713
Query: 173 ATVYPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRL 352
+ Y +LI+ C G + AE + EM+ P VTY + +E + A +L
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773
Query: 353 YHEMTGKGIAPNTYTFTALI 412
+++M KG+ NT ++ L+
Sbjct: 774 HNDML-KGLLANTVSYNILV 792
Score = 55.1 bits (131), Expect = 6e-06
Identities = 33/136 (24%), Positives = 64/136 (47%)
Frame = +2
Query: 5 KDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVY 184
++ ++ ++ L++R M L P T +++ + +++ L+ FG + G++ +Y
Sbjct: 170 QEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIY 229
Query: 185 PYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEM 364
Y ++I C L A+ M + L VV Y LI G CK K V A + + +
Sbjct: 230 IYVAVIRSFCELKNFAKAKEMIQRMESSDLN--VVVYNVLIHGLCKNKRVWEAVEIKNGL 287
Query: 365 TGKGIAPNTYTFTALI 412
KG+ + T+ L+
Sbjct: 288 IQKGLTASEVTYCTLV 303
>ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g59900 gi|9757911|dbj|BAB08358.1| unnamed
protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 182 bits (463), Expect = 2e-44
Identities = 86/137 (62%), Positives = 102/137 (74%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK K EAELL+ MG GL PND+TYSI+ID FCRRGKL+TAL F G M G+K +V
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YPYNSLI+GHC G + AE F EMIN+ L P VVTYTSL+ GYC + +++ A RLYHE
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 362 MTGKGIAPNTYTFTALI 412
MTGKGIAP+ YTFT L+
Sbjct: 498 MTGKGIAPSIYTFTTLL 514
Score = 82.4 bits (202), Expect = 3e-14
Identities = 44/137 (32%), Positives = 65/137 (47%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK G + EAE+L M P PN +TY +D + + + G+ A
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YN LI G C G++ A MI G++P +TYT++I C+ +V A L++
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 362 MTGKGIAPNTYTFTALI 412
MT KGI P+ + LI
Sbjct: 848 MTEKGIRPDRVAYNTLI 864
Score = 71.6 bits (174), Expect = 6e-11
Identities = 36/134 (26%), Positives = 64/134 (47%)
Frame = +2
Query: 11 GKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYPY 190
G + +A L+ +M + PN +TY+++I+ +C G ++ A F M G+ Y Y
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 191 NSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMTG 370
LI G C G+ A+ F + + YT L+ G+C+E ++ A + EM
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 371 KGIAPNTYTFTALI 412
+G+ + + LI
Sbjct: 641 RGVDLDLVCYGVLI 654
Score = 69.7 bits (169), Expect = 2e-10
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C G+ EA++ + N+I Y+ ++ FCR GKL AL M GV +
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 182 YPYNSLISGHCNLGKLRTAESFFG---EMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRL 352
Y LI G K + + FFG EM ++GL P V YTS+I K + AF +
Sbjct: 648 VCYGVLIDGSL---KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 353 YHEMTGKGIAPNTYTFTALI 412
+ M +G PN T+TA+I
Sbjct: 705 WDLMINEGCVPNEVTYTAVI 724
Score = 69.3 bits (168), Expect = 3e-10
Identities = 35/106 (33%), Positives = 52/106 (49%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C GK+ +A LY +M KG+ P+ T++ ++ R G + A+ F M VK
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYC 319
YN +I G+C G + A F EM +G+ P +Y LI G C
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Score = 69.3 bits (168), Expect = 3e-10
Identities = 40/137 (29%), Positives = 67/137 (48%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C++G + +A ++M KG+ P+ +Y +I C G+ + A +F + +
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y L+ G C GKL A S EM+ +G+ +V Y LI G K K+ F L E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 362 MTGKGIAPNTYTFTALI 412
M +G+ P+ +T++I
Sbjct: 673 MHDRGLKPDDVIYTSMI 689
Score = 68.6 bits (166), Expect = 5e-10
Identities = 38/114 (33%), Positives = 57/114 (50%)
Frame = +2
Query: 56 KGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYPYNSLISGHCNLGKLRT 235
KGL N TY+++I FCR+G++ A RM GV Y ++I+ C ++
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 236 AESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMTGKGIAPNTYT 397
A + M +G+ P V Y +LI G C E+ A L +EM +G+ PN T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 67.0 bits (162), Expect = 1e-09
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVA---GVK 172
C++GKLEEA + ++M +G+ + + Y ++ID + LFFG +K G+K
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH---KDRKLFFGLLKEMHDRGLK 679
Query: 173 ATVYPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRL 352
Y S+I G + A + MIN+G P VTYT++I G CK V+ A L
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 353 YHEMTGKGIAPNTYTF 400
+M PN T+
Sbjct: 740 CSKMQPVSSVPNQVTY 755
Score = 65.1 bits (157), Expect = 6e-09
Identities = 37/137 (27%), Positives = 65/137 (47%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK K+ EA + +D+ K L P+ +TY ++ C+ + L M +
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
+SL+ G GK+ A + +++ G++P + Y +LI CK ++ H A L+
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 362 MTGKGIAPNTYTFTALI 412
M G+ PN T++ LI
Sbjct: 393 MGKIGLRPNDVTYSILI 409
Score = 64.7 bits (156), Expect = 7e-09
Identities = 33/93 (35%), Positives = 50/93 (53%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C+ G++EEA L M G+ P+ ITY+ +I+ CRR + A+ + M G++
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAP 280
YN+LI G C G++ A EM+ QGL P
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 64.3 bits (155), Expect = 1e-08
Identities = 36/126 (28%), Positives = 58/126 (46%)
Frame = +2
Query: 35 LYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYPYNSLISGHC 214
L+ DM G+ P+ Y+ +I + C L+ A M+ G + PYN LI G C
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 215 NLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMTGKGIAPNTY 394
K+ A ++ + L P VVTY +L+ G CK +E + EM +P+
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333
Query: 395 TFTALI 412
++L+
Sbjct: 334 AVSSLV 339
Score = 57.0 bits (136), Expect = 2e-06
Identities = 33/137 (24%), Positives = 61/137 (44%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C+ L A+ + M G N + Y+++ID C++ K+ A+ + +K V
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y +L+ G C + + EM+ +P +SL+ G K ++ A L
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Query: 362 MTGKGIAPNTYTFTALI 412
+ G++PN + + ALI
Sbjct: 358 VVDFGVSPNLFVYNALI 374
Score = 54.7 bits (130), Expect = 8e-06
Identities = 32/117 (27%), Positives = 51/117 (43%)
Frame = +2
Query: 62 LHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYPYNSLISGHCNLGKLRTAE 241
L P T S ++ + A+ F M G++ VY Y +I C L L A+
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 242 SFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMTGKGIAPNTYTFTALI 412
M G +V Y LI G CK+++V A + ++ GK + P+ T+ L+
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304
>ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312192|gb|EFH42616.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 907
Score = 177 bits (449), Expect = 8e-43
Identities = 84/137 (61%), Positives = 101/137 (73%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK +EAELL+ MG GL PND+TYSI+ID FCRRGKL+TAL F G M G+K +V
Sbjct: 378 CKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSV 437
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
YPYNSLI+GHC G + AES EMIN+ L P VVTYTSL+ GYC + +++ A RLYHE
Sbjct: 438 YPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 362 MTGKGIAPNTYTFTALI 412
MTGKGI P+ YTFT L+
Sbjct: 498 MTGKGIVPSIYTFTTLL 514
Score = 85.5 bits (210), Expect = 4e-15
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRR-GKLNTALLFFGRMKVAGVKAT 178
CK G + EAE+L M P PN +TY +D + G + A+ + + G+ A
Sbjct: 728 CKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI-LKGLLAN 786
Query: 179 VYPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYH 358
YN LI G C G++ A MI G++P +TYT++I+ C+ +V A L++
Sbjct: 787 TATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWN 846
Query: 359 EMTGKGIAPNTYTFTALI 412
MT KGI P+ + LI
Sbjct: 847 SMTEKGIRPDRVAYNTLI 864
Score = 71.6 bits (174), Expect = 6e-11
Identities = 40/114 (35%), Positives = 58/114 (50%)
Frame = +2
Query: 56 KGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYPYNSLISGHCNLGKLRT 235
KGL N TY+++I FCR+G++ A RM GV Y ++IS C ++
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKK 840
Query: 236 AESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMTGKGIAPNTYT 397
A + M +G+ P V Y +LI G C E+ A L +EM +G+ PNT T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894
Score = 71.2 bits (173), Expect = 8e-11
Identities = 36/106 (33%), Positives = 53/106 (50%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C GK+ +A LY +M KG+ P+ T++ ++ R G + A+ F M VK
Sbjct: 483 CSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNR 542
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYC 319
YN +I G+C G + A F EMI +G+ P +Y LI G C
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLC 588
Score = 70.9 bits (172), Expect = 1e-10
Identities = 43/133 (32%), Positives = 64/133 (48%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C++GKLEEA + +DMG +G+ + + Y ++ID + L M G+K
Sbjct: 623 CREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDD 682
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y S+I G + A + MIN+G P VTYT++I G CK V+ A L +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSK 742
Query: 362 MTGKGIAPNTYTF 400
M PN T+
Sbjct: 743 MRPGNSVPNQVTY 755
Score = 68.9 bits (167), Expect = 4e-10
Identities = 35/134 (26%), Positives = 64/134 (47%)
Frame = +2
Query: 11 GKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYPY 190
G + +A L+ +M + PN +TY+++I+ +C G ++ A F M G+ Y Y
Sbjct: 521 GLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSY 580
Query: 191 NSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMTG 370
LI G C G+ A+ F + + YT L+ G+C+E ++ A + +M
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGL 640
Query: 371 KGIAPNTYTFTALI 412
+G+ + + LI
Sbjct: 641 RGVDLDLVCYGVLI 654
Score = 68.6 bits (166), Expect = 5e-10
Identities = 43/137 (31%), Positives = 63/137 (45%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C G+ EA++ + N+I Y+ ++ FCR GKL AL M + GV +
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDL 647
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y LI G + EM ++GL P V YTS+I K + AF ++
Sbjct: 648 VCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 362 MTGKGIAPNTYTFTALI 412
M +G PN T+TA+I
Sbjct: 708 MINEGCVPNEVTYTAVI 724
Score = 66.6 bits (161), Expect = 2e-09
Identities = 40/137 (29%), Positives = 63/137 (45%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK + E + +M P++ S +++ +RGK+ AL R+ GV +
Sbjct: 308 CKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNI 367
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
+ YN+LI C AE F M GL P VTY+ LI +C+ ++ A E
Sbjct: 368 FVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 362 MTGKGIAPNTYTFTALI 412
M G+ P+ Y + +LI
Sbjct: 428 MIDMGLKPSVYPYNSLI 444
Score = 65.5 bits (158), Expect = 4e-09
Identities = 36/109 (33%), Positives = 54/109 (49%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C+ G++EEA L M G+ P+ ITY+ +I CRR + A+ + M G++
Sbjct: 798 CRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEK 328
YN+LI G C G++ A EM+ QGL P T + I+ K
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISNDSSSK 906
Score = 62.8 bits (151), Expect = 3e-08
Identities = 36/126 (28%), Positives = 59/126 (46%)
Frame = +2
Query: 35 LYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATVYPYNSLISGHC 214
L+ DM G+ P+ Y+ +I + C L+ A +M+ G + PYN LI G C
Sbjct: 214 LFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLC 273
Query: 215 NLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHEMTGKGIAPNTY 394
K+ A ++ + L P VVTY +L+ G CK +E + EM +P+
Sbjct: 274 KKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEA 333
Query: 395 TFTALI 412
++L+
Sbjct: 334 AVSSLV 339
Score = 60.8 bits (146), Expect = 1e-07
Identities = 38/137 (27%), Positives = 64/137 (46%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C++G + +A +M KG+ P+ +Y +I C G+ + A +F + +
Sbjct: 553 CEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y L+ G C GKL A S +M +G+ +V Y LI G K K+ L E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKE 672
Query: 362 MTGKGIAPNTYTFTALI 412
M +G+ P+ +T++I
Sbjct: 673 MHDRGLKPDDVIYTSMI 689
Score = 59.3 bits (142), Expect = 3e-07
Identities = 36/137 (26%), Positives = 61/137 (44%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
CK K+ EA + +D+ K L P+ +TY ++ C+ + L M +
Sbjct: 273 CKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSE 332
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
+SL+ G GK+ A + + G++P + Y +LI CK + A L+
Sbjct: 333 AAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDR 392
Query: 362 MTGKGIAPNTYTFTALI 412
M G+ PN T++ LI
Sbjct: 393 MGKIGLCPNDVTYSILI 409
Score = 58.2 bits (139), Expect = 7e-07
Identities = 34/137 (24%), Positives = 61/137 (44%)
Frame = +2
Query: 2 CKDGKLEEAELLYRDMGPKGLHPNDITYSIIIDAFCRRGKLNTALLFFGRMKVAGVKATV 181
C+ L A+ + M G N + Y+++ID C++ K+ A+ + +K V
Sbjct: 238 CELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDV 297
Query: 182 YPYNSLISGHCNLGKLRTAESFFGEMINQGLAPCVVTYTSLIAGYCKEKEVHNAFRLYHE 361
Y +L+ G C + + EM+ +P +SL+ G K +V A L
Sbjct: 298 VTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKR 357
Query: 362 MTGKGIAPNTYTFTALI 412
+ G++PN + + ALI
Sbjct: 358 VAEFGVSPNIFVYNALI 374