BLASTX nr result

ID: Panax21_contig00033413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033413
         (1083 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618176.1| MADS-box transcription factor [Medicago trun...    82   2e-13
emb|CAN81313.1| hypothetical protein VITISV_016405 [Vitis vinifera]    80   7e-13
ref|XP_002318787.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-12
ref|XP_002301840.1| predicted protein [Populus trichocarpa] gi|2...    78   4e-12
ref|XP_003618177.1| Agamous-like MADS-box protein AGL36 [Medicag...    77   6e-12

>ref|XP_003618176.1| MADS-box transcription factor [Medicago truncatula]
           gi|355493191|gb|AES74394.1| MADS-box transcription
           factor [Medicago truncatula]
          Length = 315

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 6/120 (5%)
 Frame = +2

Query: 203 ELSILCGIKVCMIIYGPENR------PEIRPQDSSQVLELINKYRKQSRADRKRRTVNIS 364
           E SILC + VC+I+Y P         PE  P+D  +V  ++ KY  ++  DR+ +T ++ 
Sbjct: 34  EFSILCDVDVCLILYAPNLEGQGYIEPETWPKDKREVQRVLQKYY-ETTIDRRPKTYDVQ 92

Query: 365 EYYVDRKRKAEKELDKIRQINEDKAKFPTWDFWYKGL*EGQIRKIVRVLDSRLEDAKAKL 544
           EY+ +R +K E E+ K+R+    K K+PTWD  Y      Q+R  VR LDS+L+    K+
Sbjct: 93  EYFKERMKKVELEIYKVRK-ERLKMKYPTWDESYNSFGNEQLRSFVRFLDSKLDACDQKM 151


>emb|CAN81313.1| hypothetical protein VITISV_016405 [Vitis vinifera]
          Length = 283

 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 39/119 (32%), Positives = 73/119 (61%), Gaps = 5/119 (4%)
 Frame = +2

Query: 203 ELSILCGIKVCMIIYG--PENRPE---IRPQDSSQVLELINKYRKQSRADRKRRTVNISE 367
           E+S LCG+  C+IIY    ++RP      P +  +V  +IN+Y++ S+ +R  +T+++S 
Sbjct: 34  EISTLCGVDACVIIYSWTSDDRPMEPIFWPSNPEKVKSIINRYKEHSKEERGLKTLDLSG 93

Query: 368 YYVDRKRKAEKELDKIRQINEDKAKFPTWDFWYKGL*EGQIRKIVRVLDSRLEDAKAKL 544
           ++ +R +K +KE+ K+     D+ K+PTWD     L   Q+R++V  L ++LE  K+++
Sbjct: 94  FFEERTKKIQKEISKLGHQGADQTKYPTWDDQLNDLSVDQLRELVNALGTKLEVIKSRV 152


>ref|XP_002318787.1| predicted protein [Populus trichocarpa] gi|222859460|gb|EEE97007.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 44/121 (36%), Positives = 73/121 (60%), Gaps = 7/121 (5%)
 Frame = +2

Query: 203 ELSILCGIKVCMIIYGPENR-------PEIRPQDSSQVLELINKYRKQSRADRKRRTVNI 361
           E SILCG+  C+II+GP+ +       PE  P +S +V  +IN+Y+    +D+ RR   +
Sbjct: 34  EFSILCGVDACVIIFGPKQKDDHQPVAPETWPPNSEEVRCIINRYK---GSDQPRRCYQV 90

Query: 362 SEYYVDRKRKAEKELDKIRQINEDKAKFPTWDFWYKGL*EGQIRKIVRVLDSRLEDAKAK 541
           S+Y+VD+K++ + EL ++ +    KAK+P WD     L   Q+R +V  LD++++ A  K
Sbjct: 91  SDYFVDKKKQIDSELARLHK-QIIKAKYPAWDDRLNSLYADQLRVLVGHLDAKIDLADKK 149

Query: 542 L 544
           L
Sbjct: 150 L 150


>ref|XP_002301840.1| predicted protein [Populus trichocarpa] gi|222843566|gb|EEE81113.1|
           predicted protein [Populus trichocarpa]
          Length = 406

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 7/121 (5%)
 Frame = +2

Query: 203 ELSILCGIKVCMIIYGPENR-------PEIRPQDSSQVLELINKYRKQSRADRKRRTVNI 361
           E SILCG+  C+II+GP+ +       PE  P  S +V  +IN+Y+    +D+ RR   +
Sbjct: 34  EFSILCGVDACVIIFGPKEKDDHQPVAPETWPPSSEEVRCIINRYK---GSDQPRRCYQV 90

Query: 362 SEYYVDRKRKAEKELDKIRQINEDKAKFPTWDFWYKGL*EGQIRKIVRVLDSRLEDAKAK 541
           S+Y+ D+K++ + EL ++ +    KAK+P WD     L   Q+R IV  LD++++ A  K
Sbjct: 91  SDYFADKKKQIDSELARLHK-QIIKAKYPAWDDRLNRLYADQLRVIVGHLDAKIDLADKK 149

Query: 542 L 544
           L
Sbjct: 150 L 150


>ref|XP_003618177.1| Agamous-like MADS-box protein AGL36 [Medicago truncatula]
           gi|355493192|gb|AES74395.1| Agamous-like MADS-box
           protein AGL36 [Medicago truncatula]
          Length = 347

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
 Frame = +2

Query: 200 DELSILCGIKVCMIIYGPE------NRPEIRPQDSSQVLELINKYRKQSRADRKRRTVNI 361
           +ELSILC +  C+I+Y P       + PE  P+D+ ++  ++ +Y   +  DR+ +T N+
Sbjct: 33  EELSILCDVDACVILYAPNFEGQGYDEPETWPKDTKELQRILQRYYNTT-IDRRLKTYNV 91

Query: 362 SEYYVDRKRKAEKELDKIRQINEDKAKFPTWDFWYKGL*EGQIRKIVRVLDSRLEDAKAK 541
            EY+ +R +K E E+ K+R+  + K K+ TWD  +  L + Q+R    +LD +L+    K
Sbjct: 92  QEYFKERMKKVEFEISKVRK-EKFKMKYQTWDESFNFLEDEQLRLFASILDFKLDACNLK 150

Query: 542 L 544
           +
Sbjct: 151 M 151


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