BLASTX nr result

ID: Panax21_contig00033409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033409
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV08637.1| AGO2A2 [Solanum lycopersicum]                          209   7e-52
ref|XP_002332150.1| argonaute protein group [Populus trichocarpa...   207   3e-51
ref|XP_002520551.1| eukaryotic translation initiation factor 2c,...   204   1e-50
gb|AFV15379.1| AGO2A [Solanum lycopersicum]                           202   9e-50
emb|CBI29068.3| unnamed protein product [Vitis vinifera]              196   5e-48

>gb|AFV08637.1| AGO2A2 [Solanum lycopersicum]
          Length = 1042

 Score =  209 bits (531), Expect = 7e-52
 Identities = 127/273 (46%), Positives = 161/273 (58%), Gaps = 19/273 (6%)
 Frame = +2

Query: 26  NPPPAQPWGYRSVQGGQGG----IQRPQSA--------------MGQGAGATGGRRSWSG 151
           NP     W  + VQ G GG      RPQ                  QG+G+ G   +W+ 
Sbjct: 89  NPGRGGTWVNQPVQRGGGGGGSAWPRPQQQGSGVPNTTWPRPPPQQQGSGS-GVANAWAR 147

Query: 152 SPPXXXXXXXXXXXXXXXQRTDPVP-DSVTSDMKSLQISDSPSRLNATSSENRLMPMKRP 328
            PP                R+ P   D V  D+ SL+I+D        SS+ + +P+ RP
Sbjct: 148 PPPQRSQQHGGGNQQQVVDRSPPQSSDPVQVDLGSLKITDQSPSSRQESSKEKRVPIARP 207

Query: 329 DRGGVVAVRSTRLLVNHFPVTFNSQSTILHYNVDVKQEVTLGSRSVNRSIPKSVLNSIRE 508
           D G + AV+S  LL NHFPV FN QSTI+HY+VD++Q    G+R V +   KSVL+ IRE
Sbjct: 208 DTGKI-AVKSIALLANHFPVRFNPQSTIMHYDVDIQQRAD-GNRPVKKLTNKSVLHMIRE 265

Query: 509 KLFSDSIWEFPLQKTAYDGEKNIFSAVKLPTGSFKVELSDGEDTKSRIYTFTIELVNELQ 688
           KL +D    FPL KTAYDG+KNIFSAV+LPTG F V  SDGED + R Y  TI+LV EL+
Sbjct: 266 KLCADDPTRFPLDKTAYDGKKNIFSAVQLPTGCFAVNWSDGEDARLRSYDITIKLVAELK 325

Query: 689 LSKLKDYLAGNLMSMPRDILQGMDLVMKENPSR 787
           L KLK+YL+G+L  +PRDILQGM+LVMKENP+R
Sbjct: 326 LCKLKEYLSGSLSHIPRDILQGMELVMKENPTR 358


>ref|XP_002332150.1| argonaute protein group [Populus trichocarpa]
           gi|222875200|gb|EEF12331.1| argonaute protein group
           [Populus trichocarpa]
          Length = 1020

 Score =  207 bits (526), Expect = 3e-51
 Identities = 126/264 (47%), Positives = 158/264 (59%), Gaps = 2/264 (0%)
 Frame = +2

Query: 2   QGGTQMGTNPPPAQPWGYRSVQGGQGGIQRPQSAMGQGAGATGGRRSWSGSPPXXXXXXX 181
           +GG + G    P Q W        QGG   P  ++G    A GG     G+P        
Sbjct: 85  RGGYEEGRGGYPRQHWR----PNNQGGGGTPGQSVGGAWAARGGHGGDGGTPGQSLGGGG 140

Query: 182 XXXXXXXXQRTDPVPDSVTSDMKSLQISDSPSRLNATSSEN--RLMPMKRPDRGGVVAVR 355
                           SV  +M        P  L ++SS+N  R+ P++RPD GG +AVR
Sbjct: 141 TPG------------QSVAPNM--------PKGLASSSSDNANRVSPVQRPDTGGKLAVR 180

Query: 356 STRLLVNHFPVTFNSQSTILHYNVDVKQEVTLGSRSVNRSIPKSVLNSIREKLFSDSIWE 535
           + RLLVNHFPV F+ +S I HY+VD+KQEV        + I KS+L  IR+KLF+D    
Sbjct: 181 TPRLLVNHFPVKFSPKSIIRHYDVDIKQEVPPKHGRPGK-ISKSILTMIRDKLFTDDPSR 239

Query: 536 FPLQKTAYDGEKNIFSAVKLPTGSFKVELSDGEDTKSRIYTFTIELVNELQLSKLKDYLA 715
           FPL KTAYD EKNIFSAV LPTG+F+VE+S+ ED K R Y FTI+LVNELQL KLKDYL 
Sbjct: 240 FPLGKTAYDREKNIFSAVPLPTGTFRVEVSEAEDAKPRSYLFTIKLVNELQLRKLKDYLD 299

Query: 716 GNLMSMPRDILQGMDLVMKENPSR 787
           G L S+PRDILQGMD+V+KE+P+R
Sbjct: 300 GTLRSVPRDILQGMDVVVKEHPAR 323


>ref|XP_002520551.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223540265|gb|EEF41837.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 338

 Score =  204 bits (520), Expect = 1e-50
 Identities = 107/183 (58%), Positives = 139/183 (75%), Gaps = 2/183 (1%)
 Frame = +2

Query: 245 MKSLQISDSPSRLNAT-SSENRLMPMKRPDRGGVVAVRSTRLLVNHFPVTFNSQSTILHY 421
           M+SL IS   +  +++  +  R++P+KRPD+GG +A+R+  L VNHFPV FNS+  I HY
Sbjct: 1   MRSLNISRHLASCSSSLDTATRVVPVKRPDKGGRLAIRTANLRVNHFPVRFNSECIIRHY 60

Query: 422 NVDVKQEVT-LGSRSVNRSIPKSVLNSIREKLFSDSIWEFPLQKTAYDGEKNIFSAVKLP 598
           ++DVK +V   G R+V  S  KS L +IR KLF++   +FPL  TAYDGEKNIFSAV LP
Sbjct: 61  DIDVKPDVAPKGGRAVKMS--KSNLATIRNKLFTEDPSQFPLSMTAYDGEKNIFSAVPLP 118

Query: 599 TGSFKVELSDGEDTKSRIYTFTIELVNELQLSKLKDYLAGNLMSMPRDILQGMDLVMKEN 778
           TG FKVE S+GED + R YTFTI+ V+EL+L KLKDYL+G L+S+PRDILQGMD+VMKEN
Sbjct: 119 TGKFKVEFSEGEDMRDRTYTFTIKFVSELKLCKLKDYLSGKLLSIPRDILQGMDVVMKEN 178

Query: 779 PSR 787
           P+R
Sbjct: 179 PAR 181


>gb|AFV15379.1| AGO2A [Solanum lycopersicum]
          Length = 1057

 Score =  202 bits (513), Expect = 9e-50
 Identities = 127/281 (45%), Positives = 161/281 (57%), Gaps = 27/281 (9%)
 Frame = +2

Query: 26  NPPPAQPWGYRSVQGGQGG----IQRPQSA--------------MGQGAGATGGRRSWSG 151
           NP     W  + VQ G GG      RPQ                  QG+G+ G   +W+ 
Sbjct: 96  NPGRGGTWVNQPVQRGGGGGGSAWPRPQQQGSGVPNTTWPRPPPQQQGSGS-GVANAWAR 154

Query: 152 SPPXXXXXXXXXXXXXXXQRTDPVP-DSVTSDMKSLQISDSPSRLNATSSENRLMPMKRP 328
            PP                R+ P   D V  D+ SL+I+D        SS+ + +P+ RP
Sbjct: 155 PPPQRSQQHGGGNQQQVVDRSPPQSSDPVQVDLGSLKITDQSPSSRQESSKEKRVPIARP 214

Query: 329 DRGGVVAVRSTRLLVNHFPVTFNSQSTILHYNVDVKQEVTLGSRSVNRSIPKSVLNSIRE 508
           D G + AV+S  LL NHFPV FN QSTI+HY+VD++Q    G+R V +   KSVL+ IRE
Sbjct: 215 DTGKI-AVKSIALLANHFPVRFNPQSTIMHYDVDIQQRAD-GNRPVKKLTNKSVLHMIRE 272

Query: 509 KLFSDSIWEFPLQKTAYDGEKNIFSAVKLPTG--------SFKVELSDGEDTKSRIYTFT 664
           KL +D    FPL KTAYDG+KNIFSAV+LPTG         F V  SDGED + R Y  T
Sbjct: 273 KLCADDPTRFPLDKTAYDGKKNIFSAVQLPTGCFAVNWSDGFAVNWSDGEDARLRSYDIT 332

Query: 665 IELVNELQLSKLKDYLAGNLMSMPRDILQGMDLVMKENPSR 787
           I+LV EL+L KLK+YL+G+L  +PRDILQGM+LVMKENP+R
Sbjct: 333 IKLVAELKLCKLKEYLSGSLSHIPRDILQGMELVMKENPTR 373


>emb|CBI29068.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score =  196 bits (498), Expect = 5e-48
 Identities = 102/188 (54%), Positives = 136/188 (72%)
 Frame = +2

Query: 224 PDSVTSDMKSLQISDSPSRLNATSSENRLMPMKRPDRGGVVAVRSTRLLVNHFPVTFNSQ 403
           PD+V  +M+  ++  S +  ++    +R++P++RPD+GG  A++ST + VNHFPV FNS+
Sbjct: 113 PDTVP-EMEPSKLLGSLTPTSSLERMDRVLPIRRPDKGGTNAIQSTMVRVNHFPVKFNSE 171

Query: 404 STILHYNVDVKQEVTLGSRSVNRSIPKSVLNSIREKLFSDSIWEFPLQKTAYDGEKNIFS 583
             ILHY+VD+K EV L        + KS    I+EKLFSD    FPL +TA+DGEKNIFS
Sbjct: 172 KIILHYDVDIKPEV-LPKHGRTLKLSKSNRCMIKEKLFSDDPSRFPLSRTAFDGEKNIFS 230

Query: 584 AVKLPTGSFKVELSDGEDTKSRIYTFTIELVNELQLSKLKDYLAGNLMSMPRDILQGMDL 763
            V+LPTG FKVE S+ ED K   Y FTI+LVN+L+L KLKDYL+G L S+PR+ILQGMD+
Sbjct: 231 VVELPTGKFKVEFSESEDMKICSYIFTIKLVNQLELRKLKDYLSGKLFSIPREILQGMDV 290

Query: 764 VMKENPSR 787
           VMKENP+R
Sbjct: 291 VMKENPAR 298


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