BLASTX nr result

ID: Panax21_contig00033402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033402
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30030.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002278955.1| PREDICTED: uncharacterized protein LOC100260...    94   1e-17
ref|XP_002878181.1| hypothetical protein ARALYDRAFT_486249 [Arab...    93   3e-17
ref|NP_191358.1| uncharacterized protein [Arabidopsis thaliana] ...    90   3e-16
ref|XP_002308367.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15

>emb|CBI30030.3| unnamed protein product [Vitis vinifera]
          Length = 304

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 46/78 (58%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   SFNPFGLVFKSGIGHLGSPIASSLTMGAEFNIIGNQNPRFFVHFKPQLGDFTLKKSQSSD 182
           S+NPF L+ K+G G  GSP +SS+ M AEFN++G  NP FF+HFKP+ GDF +KKSQSS 
Sbjct: 63  SWNPFSLIVKTGSGPFGSPNSSSMMMTAEFNMLGRGNPSFFLHFKPRFGDFCIKKSQSSA 122

Query: 183 FVKS-LKSKGNGIVSGED 233
           FV   LKS+ NG+VS E+
Sbjct: 123 FVNHILKSEPNGVVSDEE 140


>ref|XP_002278955.1| PREDICTED: uncharacterized protein LOC100260592 [Vitis vinifera]
          Length = 367

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 46/78 (58%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   SFNPFGLVFKSGIGHLGSPIASSLTMGAEFNIIGNQNPRFFVHFKPQLGDFTLKKSQSSD 182
           S+NPF L+ K+G G  GSP +SS+ M AEFN++G  NP FF+HFKP+ GDF +KKSQSS 
Sbjct: 63  SWNPFSLIVKTGSGPFGSPNSSSMMMTAEFNMLGRGNPSFFLHFKPRFGDFCIKKSQSSA 122

Query: 183 FVKS-LKSKGNGIVSGED 233
           FV   LKS+ NG+VS E+
Sbjct: 123 FVNHILKSEPNGVVSDEE 140


>ref|XP_002878181.1| hypothetical protein ARALYDRAFT_486249 [Arabidopsis lyrata subsp.
           lyrata] gi|297324019|gb|EFH54440.1| hypothetical protein
           ARALYDRAFT_486249 [Arabidopsis lyrata subsp. lyrata]
          Length = 357

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/79 (55%), Positives = 57/79 (72%)
 Frame = +3

Query: 3   SFNPFGLVFKSGIGHLGSPIASSLTMGAEFNIIGNQNPRFFVHFKPQLGDFTLKKSQSSD 182
           S+NPF L+ K+G G  GSPI+SS+ M AEFN++G  NP F +HFKPQ GDF++KKS SS 
Sbjct: 63  SWNPFSLIVKTGSGSFGSPISSSMLMSAEFNLLGKGNPSFMLHFKPQFGDFSIKKSHSSS 122

Query: 183 FVKSLKSKGNGIVSGEDKT 239
               +KS  NG VSG+D +
Sbjct: 123 QTNLIKSM-NGSVSGDDSS 140


>ref|NP_191358.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6729542|emb|CAB67627.1| putative protein [Arabidopsis
           thaliana] gi|20259405|gb|AAM14023.1| unknown protein
           [Arabidopsis thaliana] gi|21689689|gb|AAM67466.1|
           unknown protein [Arabidopsis thaliana]
           gi|332646206|gb|AEE79727.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 367

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   SFNPFGLVFKSGIGHLGSPIASSLTMGAEFNIIGNQNPRFFVHFKPQLGDFTLKKSQSSD 182
           S+NPF L+ K+G G  GSPI+SS+ M AEFN++G  NP F +HFKPQ GDF++KKS SS 
Sbjct: 63  SWNPFSLIVKTGSGSFGSPISSSMLMSAEFNLLGQGNPSFMLHFKPQFGDFSIKKSHSSS 122

Query: 183 -FVKSLKSKGNGIVSGEDKT 239
            F ++L    NG VS +D +
Sbjct: 123 GFERNLIKSMNGSVSEDDSS 142


>ref|XP_002308367.1| predicted protein [Populus trichocarpa] gi|222854343|gb|EEE91890.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 7/84 (8%)
 Frame = +3

Query: 3   SFNPFGLVFKSGIGHLGSPIASSLTMGAEFNIIG------NQNPRFFVHFKPQLGDFTLK 164
           ++NPF LV K+G G  GSP++SS+ M AEFN++G      N NP F +HFKPQ GDF++K
Sbjct: 63  TWNPFSLVIKTGTGPFGSPVSSSMIMSAEFNLLGKGSNNNNLNPSFMLHFKPQFGDFSIK 122

Query: 165 KSQSSDFVKSL-KSKGNGIVSGED 233
           KSQSS  V  + +S  NG VS +D
Sbjct: 123 KSQSSSHVSHVTRSIQNGGVSSDD 146



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/51 (56%), Positives = 37/51 (72%)
 Frame = +2

Query: 374 GKKFTVLSPEVTAASMVKGFFSGIEMSARTTLPLSNRDVMNFR*GVRLPAE 526
           GK+  VL P    AS V G FSG+E++ART LP+ +R V+NFR GVR+PAE
Sbjct: 171 GKRIAVLPP--VTASAVAGVFSGLEVAARTKLPVRSRAVVNFRWGVRVPAE 219


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