BLASTX nr result

ID: Panax21_contig00033396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033396
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534314.1| conserved hypothetical protein [Ricinus comm...   148   5e-34
dbj|BAC43153.1| unknown protein [Arabidopsis thaliana]                143   2e-32
gb|AAM64738.1| unknown [Arabidopsis thaliana]                         143   2e-32
ref|NP_565538.1| GLABRA2 expression modulator [Arabidopsis thali...   143   2e-32
ref|XP_002878618.1| hypothetical protein ARALYDRAFT_481108 [Arab...   142   4e-32

>ref|XP_002534314.1| conserved hypothetical protein [Ricinus communis]
           gi|223525515|gb|EEF28070.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/92 (77%), Positives = 80/92 (86%)
 Frame = -1

Query: 471 GVLYVSTSKLAYCSDNPLSYKADDKTEWIYYKVVIPLHQLKAVNASSSRTSSAEKYIQVI 292
           G+LYVST+KLA+CSDNPLSYK   +TEW YYKVVIPLHQLKAVN SSSRT+ AEKY+QVI
Sbjct: 220 GILYVSTAKLAFCSDNPLSYKNSGQTEWSYYKVVIPLHQLKAVNPSSSRTNPAEKYVQVI 279

Query: 291 SVDNHEFWYMGFLNYDGAVKSLVQAASNSHSV 196
           SVDNHEFW+MGFLNYDGAVK L Q    +HS+
Sbjct: 280 SVDNHEFWFMGFLNYDGAVKCL-QDGLQAHSL 310


>dbj|BAC43153.1| unknown protein [Arabidopsis thaliana]
          Length = 299

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/82 (81%), Positives = 74/82 (90%)
 Frame = -1

Query: 471 GVLYVSTSKLAYCSDNPLSYKADDKTEWIYYKVVIPLHQLKAVNASSSRTSSAEKYIQVI 292
           GVLY+S++KLAYCSDNPLSYK  D+TEW YYKVVIPLHQLKAVN S+S  + AEKYIQVI
Sbjct: 206 GVLYISSAKLAYCSDNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVI 265

Query: 291 SVDNHEFWYMGFLNYDGAVKSL 226
           SVDNHEFW+MGFLNYDGAV SL
Sbjct: 266 SVDNHEFWFMGFLNYDGAVTSL 287


>gb|AAM64738.1| unknown [Arabidopsis thaliana]
          Length = 299

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/82 (81%), Positives = 74/82 (90%)
 Frame = -1

Query: 471 GVLYVSTSKLAYCSDNPLSYKADDKTEWIYYKVVIPLHQLKAVNASSSRTSSAEKYIQVI 292
           GVLY+S++KLAYCSDNPLSYK  D+TEW YYKVVIPLHQLKAVN S+S  + AEKYIQVI
Sbjct: 206 GVLYISSAKLAYCSDNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVI 265

Query: 291 SVDNHEFWYMGFLNYDGAVKSL 226
           SVDNHEFW+MGFLNYDGAV SL
Sbjct: 266 SVDNHEFWFMGFLNYDGAVTSL 287


>ref|NP_565538.1| GLABRA2 expression modulator [Arabidopsis thaliana]
           gi|75160436|sp|Q8S8F8.1|GEM_ARATH RecName: Full=GLABRA2
           expression modulator gi|20197888|gb|AAM15301.1|
           Expressed protein [Arabidopsis thaliana]
           gi|145076288|gb|ABP35534.1| GL2 expression modulator
           [Arabidopsis thaliana] gi|330252217|gb|AEC07311.1|
           GLABRA2 expression modulator [Arabidopsis thaliana]
          Length = 299

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/82 (81%), Positives = 74/82 (90%)
 Frame = -1

Query: 471 GVLYVSTSKLAYCSDNPLSYKADDKTEWIYYKVVIPLHQLKAVNASSSRTSSAEKYIQVI 292
           GVLY+S++KLAYCSDNPLSYK  D+TEW YYKVVIPLHQLKAVN S+S  + AEKYIQVI
Sbjct: 206 GVLYISSAKLAYCSDNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVI 265

Query: 291 SVDNHEFWYMGFLNYDGAVKSL 226
           SVDNHEFW+MGFLNYDGAV SL
Sbjct: 266 SVDNHEFWFMGFLNYDGAVTSL 287


>ref|XP_002878618.1| hypothetical protein ARALYDRAFT_481108 [Arabidopsis lyrata subsp.
           lyrata] gi|297324457|gb|EFH54877.1| hypothetical protein
           ARALYDRAFT_481108 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/82 (80%), Positives = 74/82 (90%)
 Frame = -1

Query: 471 GVLYVSTSKLAYCSDNPLSYKADDKTEWIYYKVVIPLHQLKAVNASSSRTSSAEKYIQVI 292
           GV+Y+ST+KLAYCSDNPLSYK  D+TEW YYKVVIPLHQLKAVN S+S  + AEKYIQVI
Sbjct: 198 GVVYISTAKLAYCSDNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSTSIVNPAEKYIQVI 257

Query: 291 SVDNHEFWYMGFLNYDGAVKSL 226
           SVDNHEFW+MGFLNY+GAV SL
Sbjct: 258 SVDNHEFWFMGFLNYEGAVTSL 279


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