BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033386
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            133   1e-29
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   122   1e-28
gb|ACB45081.1| putative polyprotein [Solanum habrochaites]            125   4e-28
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            125   5e-27
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   123   5e-27

>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  133 bits (335), Expect = 1e-29
 Identities = 59/110 (53%), Positives = 76/110 (69%)
 Frame = -3

Query: 394 DDFSRGLWTFLVSTKQHVYKLLQDFFASVQTQFNKHIKTFRSDNGTEFSNQFMSSILTKL 215
           DD+SR +W  L+  K      +++FF+ + TQFN H+K  RSDNGTEF N     +   L
Sbjct: 585 DDYSRFVWVHLLQLKSETIVAIKNFFSMINTQFNSHVKVVRSDNGTEFLNSQCKDLFNHL 644

Query: 214 GVLHHTSCSHTPQQNGVVERKHRTLLNMSRALRFQGSLPKHFWGDCILAS 65
           G+LH +SC HTPQQNGVVERKHR +LN++RA+RFQ  LP  FWG CI A+
Sbjct: 645 GILHQSSCPHTPQQNGVVERKHRHILNIARAIRFQAHLPIRFWGYCIRAA 694


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  122 bits (307), Expect(2) = 1e-28
 Identities = 58/111 (52%), Positives = 79/111 (71%)
 Frame = -3

Query: 394 DDFSRGLWTFLVSTKQHVYKLLQDFFASVQTQFNKHIKTFRSDNGTEFSNQFMSSILTKL 215
           DD+SR +WT+L+S+K  V +L+++F A  + QF K +K FR+DNGTEF    ++      
Sbjct: 584 DDYSRSVWTYLMSSKTEVSQLIKNFCAMSERQFGKQVKAFRTDNGTEF--MCLTPYFQTH 641

Query: 214 GVLHHTSCSHTPQQNGVVERKHRTLLNMSRALRFQGSLPKHFWGDCILAST 62
           G+LH TSC  TPQQNG VERKHR +LN++RA  FQG+LP  FWG+ IL +T
Sbjct: 642 GILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTAT 692



 Score = 28.5 bits (62), Expect(2) = 1e-28
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -2

Query: 47  PSSILKFKTPYEILF 3
           PS++LK KTPYE+LF
Sbjct: 699 PSAVLKGKTPYELLF 713


>gb|ACB45081.1| putative polyprotein [Solanum habrochaites]
          Length = 559

 Score =  125 bits (314), Expect(2) = 4e-28
 Identities = 56/109 (51%), Positives = 76/109 (69%)
 Frame = -3

Query: 391 DFSRGLWTFLVSTKQHVYKLLQDFFASVQTQFNKHIKTFRSDNGTEFSNQFMSSILTKLG 212
           D SR  W +L+  K  V  +L+ F A V+TQFN  +K FRSDNG EF N  +S +    G
Sbjct: 1   DHSRWTWIYLMHLKSDVSTILKQFLAMVKTQFNVQVKVFRSDNGGEFFNAQVSELFQSQG 60

Query: 211 VLHHTSCSHTPQQNGVVERKHRTLLNMSRALRFQGSLPKHFWGDCILAS 65
           ++H +SC +TPQQNGVVERKHR ++  +RA+RFQG++P  FWG+C LA+
Sbjct: 61  IIHQSSCPYTPQQNGVVERKHRHIMETARAIRFQGNIPIKFWGECALAA 109



 Score = 24.3 bits (51), Expect(2) = 4e-28
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -2

Query: 50  IPSSILKFKTPYEILF 3
           IPS++L  K+P+EI+F
Sbjct: 116 IPSTVLLNKSPFEIMF 131


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  125 bits (313), Expect = 5e-27
 Identities = 56/107 (52%), Positives = 75/107 (70%)
 Frame = -3

Query: 394 DDFSRGLWTFLVSTKQHVYKLLQDFFASVQTQFNKHIKTFRSDNGTEFSNQFMSSILTKL 215
           DD SR +W FL+  K  V+ +L+DF   +Q QF  +IK FRSDNGTEF N   S +    
Sbjct: 347 DDCSRMIWIFLLKYKSDVFIVLKDFLQLIQRQFGGYIKIFRSDNGTEFFNSHCSELFRTA 406

Query: 214 GVLHHTSCSHTPQQNGVVERKHRTLLNMSRALRFQGSLPKHFWGDCI 74
           G++H +SC +TPQQNGVVER+HR +L ++RA+RFQ +LP  FWG C+
Sbjct: 407 GIVHQSSCVYTPQQNGVVERRHRQILEVARAIRFQANLPIRFWGLCV 453


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  123 bits (308), Expect(2) = 5e-27
 Identities = 60/110 (54%), Positives = 75/110 (68%)
 Frame = -3

Query: 394 DDFSRGLWTFLVSTKQHVYKLLQDFFASVQTQFNKHIKTFRSDNGTEFSNQFMSSILTKL 215
           DD+SRG+W +L++ K    K L+DF A V+ QF+  IKT RSDNGTEF    M       
Sbjct: 374 DDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEIKTVRSDNGTEFL--CMREYFLHK 431

Query: 214 GVLHHTSCSHTPQQNGVVERKHRTLLNMSRALRFQGSLPKHFWGDCILAS 65
           G+ H TSC  TP QNG VERKHR +LN++RALRFQ  LP  FWG+CIL++
Sbjct: 432 GITHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSA 481



 Score = 22.7 bits (47), Expect(2) = 5e-27
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -2

Query: 47  PSSILKFKTPYEILF 3
           PS +L+ K+PYE+L+
Sbjct: 489 PSMLLQGKSPYEMLY 503