BLASTX nr result

ID: Panax21_contig00033380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033380
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279721.1| PREDICTED: ATP-dependent zinc metalloproteas...   167   1e-39
ref|XP_004150623.1| PREDICTED: ATP-dependent zinc metalloproteas...   158   5e-37
ref|XP_004164592.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   157   9e-37
ref|XP_002525603.1| Cell division protein ftsH, putative [Ricinu...   144   1e-32
ref|XP_002314122.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32

>ref|XP_002279721.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 9,
           chloroplastic-like [Vitis vinifera]
          Length = 818

 Score =  167 bits (422), Expect = 1e-39
 Identities = 103/170 (60%), Positives = 113/170 (66%), Gaps = 4/170 (2%)
 Frame = -3

Query: 502 FLKNQG----SRIRANSSCEHDSDSXXXXXXXXXXXXXGVSKNSPGTGXXXXXXXSRRER 335
           FL+NQ     SRIRAN  C+ DSDS               SK+S  +         RRE+
Sbjct: 77  FLRNQEWRRESRIRAN--CQ-DSDSKASSNEKSEAKTSEGSKSSSNSNSKTP----RREK 129

Query: 334 QXXXXXXXXXXXWRWQPIIQAQEIGIVLVQLGIVMFVMRLLRPGIPLPGSEPRTQTTLVS 155
           Q            RWQPIIQAQEIGI+L+QLGIVM VMRLLRPGIPLPGSEPRT T+ VS
Sbjct: 130 QGKGGWWKGGKW-RWQPIIQAQEIGILLLQLGIVMLVMRLLRPGIPLPGSEPRTPTSFVS 188

Query: 154 VPYSDFLSKINSNQVHKVEVDGVHIMFKLKYEAGELVSEVGSASKLQDSE 5
           VPYSDFLSKINSNQV KVEVDGVHIMF+LK E G   SEVG  SKLQ+SE
Sbjct: 189 VPYSDFLSKINSNQVQKVEVDGVHIMFRLKSEQGSQESEVGGMSKLQESE 238


>ref|XP_004150623.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 9,
           chloroplastic-like [Cucumis sativus]
          Length = 827

 Score =  158 bits (399), Expect = 5e-37
 Identities = 87/133 (65%), Positives = 98/133 (73%), Gaps = 2/133 (1%)
 Frame = -3

Query: 397 VSKNSPGTGXXXXXXXSRRERQXXXXXXXXXXXW--RWQPIIQAQEIGIVLVQLGIVMFV 224
           VSKN+  +G        +RE+Q              RWQPI+QAQEIGI+L+QLGIV+FV
Sbjct: 114 VSKNTTNSGSSSNR---KREKQGKGGGWWWSKGGKWRWQPIVQAQEIGILLLQLGIVIFV 170

Query: 223 MRLLRPGIPLPGSEPRTQTTLVSVPYSDFLSKINSNQVHKVEVDGVHIMFKLKYEAGELV 44
           MRLLRPGIPLPGSEPRT TT VSVPYSDFLSKINSN V KVEVDGVHIMFKLK E G   
Sbjct: 171 MRLLRPGIPLPGSEPRTPTTFVSVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGTQE 230

Query: 43  SEVGSASKLQDSE 5
           SE+ S SKLQ+S+
Sbjct: 231 SEIISGSKLQESD 243


>ref|XP_004164592.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent zinc metalloprotease
           FTSH 9, chloroplastic-like [Cucumis sativus]
          Length = 795

 Score =  157 bits (397), Expect = 9e-37
 Identities = 87/133 (65%), Positives = 97/133 (72%), Gaps = 2/133 (1%)
 Frame = -3

Query: 397 VSKNSPGTGXXXXXXXSRRERQXXXXXXXXXXXW--RWQPIIQAQEIGIVLVQLGIVMFV 224
           VSKN+  +G        +RE+Q              RWQPI+QAQEIGI+L+QLGIV FV
Sbjct: 82  VSKNTTNSGSSSNR---KREKQGKGGGWWWSKGGKWRWQPIVQAQEIGILLLQLGIVXFV 138

Query: 223 MRLLRPGIPLPGSEPRTQTTLVSVPYSDFLSKINSNQVHKVEVDGVHIMFKLKYEAGELV 44
           MRLLRPGIPLPGSEPRT TT VSVPYSDFLSKINSN V KVEVDGVHIMFKLK E G   
Sbjct: 139 MRLLRPGIPLPGSEPRTPTTFVSVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGTQE 198

Query: 43  SEVGSASKLQDSE 5
           SE+ S SKLQ+S+
Sbjct: 199 SEIISGSKLQESD 211


>ref|XP_002525603.1| Cell division protein ftsH, putative [Ricinus communis]
           gi|223535039|gb|EEF36721.1| Cell division protein ftsH,
           putative [Ricinus communis]
          Length = 816

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/100 (73%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
 Frame = -3

Query: 295 RWQPIIQAQEIGIVLVQLGIVMFVMRLLRPGIPLPGSEPRTQTTLVSVPYSDFLSKINSN 116
           RWQP+IQ QEIG+VL+QLGIVMFVMRLLRPGI LPGSEPR QTT +SVPYS+FLSKI+ N
Sbjct: 138 RWQPLIQVQEIGVVLLQLGIVMFVMRLLRPGITLPGSEPRQQTTFISVPYSEFLSKISCN 197

Query: 115 QVHKVEVDGVHIMFKLKYE---AGELVSEVGSASKLQDSE 5
           QV KVEVDGVHIMFKLK E   + E+   + S SK Q+SE
Sbjct: 198 QVQKVEVDGVHIMFKLKNEGIISSEVSEGINSNSKFQESE 237


>ref|XP_002314122.1| predicted protein [Populus trichocarpa] gi|222850530|gb|EEE88077.1|
           predicted protein [Populus trichocarpa]
          Length = 792

 Score =  142 bits (359), Expect = 2e-32
 Identities = 74/99 (74%), Positives = 83/99 (83%), Gaps = 2/99 (2%)
 Frame = -3

Query: 295 RWQPIIQAQEIGIVLVQLGIVMFVMRLLRPGIPLPGSEPRTQTTLVSVPYSDFLSKINSN 116
           +WQP+IQAQEIG++L+QLGIVMFVMRLLRPGIPLPGSEPR  TT VSVPYS+FL KI+SN
Sbjct: 119 KWQPLIQAQEIGVLLLQLGIVMFVMRLLRPGIPLPGSEPRQPTTFVSVPYSEFLGKISSN 178

Query: 115 QVHKVEVDGVHIMFKLKYE--AGELVSEVGSASKLQDSE 5
           QV KVEVDGVHIMFKLK E  +G+  S     SK QDSE
Sbjct: 179 QVQKVEVDGVHIMFKLKDEGVSGQESSSEVVDSKFQDSE 217


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