BLASTX nr result

ID: Panax21_contig00033369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033369
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556055.1| PREDICTED: uncharacterized protein LOC100808...    81   8e-14
ref|XP_002312535.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_004134135.1| PREDICTED: uncharacterized protein LOC101205...    80   2e-13
ref|XP_002336405.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_004165791.1| PREDICTED: uncharacterized LOC101205778 [Cuc...    80   2e-13

>ref|XP_003556055.1| PREDICTED: uncharacterized protein LOC100808440 [Glycine max]
          Length = 194

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 53/108 (49%), Positives = 69/108 (63%), Gaps = 9/108 (8%)
 Frame = -3

Query: 299 ILILSILFAFNSSLQIDAMRVLPVSRKRNITV---------LDEFDSQMNRIAPRKLRRL 147
           IL++    AF+   +I  M+V PV RKRNI++         + E  + +  IA +KLRRL
Sbjct: 14  ILVVQSSAAFHGINRI--MKVHPVPRKRNISIQFGGDGGNPMSEAQALLG-IAGKKLRRL 70

Query: 146 PHVFSKVLELPFRSDADVSIEETADCIRFVTEIEDFDFAGVGNNVRAH 3
           PHVFS VLELPFRSDADV++EE  DC RFV E +     G+G +VRAH
Sbjct: 71  PHVFSCVLELPFRSDADVAVEEAPDCFRFVAETD-----GIG-DVRAH 112


>ref|XP_002312535.1| predicted protein [Populus trichocarpa] gi|222852355|gb|EEE89902.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 MRVLPVSRKRNITV-LDEFDSQMNRIAPRKLRRLPHVFSKVLELPFRSDADVSIEETADC 69
           M+V P+ +KRNIT+      S       +KLRRLPH+FS++LELPFRSDADVS+EE  DC
Sbjct: 1   MKVHPLPKKRNITIQFYPLTSSAGGFQNKKLRRLPHIFSRILELPFRSDADVSVEENPDC 60

Query: 68  IRFVTEIEDFDFAGVGNNVRAH 3
            RFV E +D     +G ++RAH
Sbjct: 61  FRFVAETDD----NIG-DMRAH 77


>ref|XP_004134135.1| PREDICTED: uncharacterized protein LOC101205778 [Cucumis sativus]
          Length = 240

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
 Frame = -3

Query: 278 FAFNSSLQIDAMRVLPVSRKRNI------TVLDEFDSQMNRIAPRKLRRLPHVFSKVLEL 117
           F  NS+    AM+V P+ RKRNI      T+ +  + Q      +KLRRLPH+FS+VLEL
Sbjct: 64  FEINSTT---AMKVHPLPRKRNIAVRNNTTLRNSLEDQSLLNNHKKLRRLPHIFSRVLEL 120

Query: 116 PFRSDADVSIEETADCIRFVTEIEDFDFAGVGNNVRAH 3
           PFRSDADV +EE  DC RF+ E +      + + VRAH
Sbjct: 121 PFRSDADVLVEENPDCFRFIAETD----GNISDGVRAH 154


>ref|XP_002336405.1| predicted protein [Populus trichocarpa] gi|222834920|gb|EEE73369.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 MRVLPVSRKRNITV-LDEFDSQMNRIAPRKLRRLPHVFSKVLELPFRSDADVSIEETADC 69
           M+V P+ +KRNIT+      S       +KLRRLPH+FS++LELPFRSDADVS+EE  DC
Sbjct: 1   MKVHPLPKKRNITIQFYPLTSSAGGSQNKKLRRLPHIFSRILELPFRSDADVSVEENPDC 60

Query: 68  IRFVTEIEDFDFAGVGNNVRAH 3
            RFV E +D     +G ++RAH
Sbjct: 61  FRFVAETDD----NIG-DMRAH 77


>ref|XP_004165791.1| PREDICTED: uncharacterized LOC101205778 [Cucumis sativus]
          Length = 240

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 8/100 (8%)
 Frame = -3

Query: 278 FAFNSSLQIDAMRVLPVSRKRNITVLD--------EFDSQMNRIAPRKLRRLPHVFSKVL 123
           F  NS+    AM+V P+ RKRNI V +        E  S +N    +KLRRLPH+FS+VL
Sbjct: 64  FEINSTT---AMKVHPLPRKRNIAVRNNTTSRNSLEDQSLLNN--HKKLRRLPHIFSRVL 118

Query: 122 ELPFRSDADVSIEETADCIRFVTEIEDFDFAGVGNNVRAH 3
           ELPFRSDADV +EE  DC RF+ E +      + + VRAH
Sbjct: 119 ELPFRSDADVLVEENPDCFRFIAETD----GNISDGVRAH 154


Top