BLASTX nr result
ID: Panax21_contig00033358
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033358 (520 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11... 77 2e-12 emb|CBI28007.3| unnamed protein product [Vitis vinifera] 77 2e-12 ref|XP_002514155.1| hypothetical protein RCOM_1048070 [Ricinus c... 72 5e-11 ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 70 2e-10 ref|XP_003630723.1| E3 ubiquitin-protein ligase CG7694 [Medicago... 69 4e-10 >ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera] Length = 102 Score = 76.6 bits (187), Expect = 2e-12 Identities = 37/65 (56%), Positives = 45/65 (69%) Frame = +2 Query: 263 MPSDISAVGVCTVCMEGFKSCTDDGGSGGTEQVLCGHVYHANCITKWLSLHNSCPLCRSS 442 MP+ ++AV CTVC EGF+S G GG +Q+ CGH YHA CI WLSL NSCPLCR S Sbjct: 45 MPT-VTAVDACTVCREGFQS-----GEGG-KQLPCGHFYHAGCIASWLSLRNSCPLCRCS 97 Query: 443 IVSDD 457 + +D Sbjct: 98 VPGED 102 >emb|CBI28007.3| unnamed protein product [Vitis vinifera] Length = 168 Score = 76.6 bits (187), Expect = 2e-12 Identities = 37/65 (56%), Positives = 45/65 (69%) Frame = +2 Query: 263 MPSDISAVGVCTVCMEGFKSCTDDGGSGGTEQVLCGHVYHANCITKWLSLHNSCPLCRSS 442 MP+ ++AV CTVC EGF+S G GG +Q+ CGH YHA CI WLSL NSCPLCR S Sbjct: 111 MPT-VTAVDACTVCREGFQS-----GEGG-KQLPCGHFYHAGCIASWLSLRNSCPLCRCS 163 Query: 443 IVSDD 457 + +D Sbjct: 164 VPGED 168 >ref|XP_002514155.1| hypothetical protein RCOM_1048070 [Ricinus communis] gi|223546611|gb|EEF48109.1| hypothetical protein RCOM_1048070 [Ricinus communis] Length = 124 Score = 72.0 bits (175), Expect = 5e-11 Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 3/116 (2%) Frame = +2 Query: 119 FDLDVALTMEELNITSSVSGPDQXXXXXXXXXXAITNNINDIYRRRRMMPSDISAVG--- 289 FDLDVALT++E++ + + +R MP+ I A Sbjct: 25 FDLDVALTLQEISHHQTTPANNSPQVVVPAD-----------HRHHNHMPTTIPATEDDE 73 Query: 290 VCTVCMEGFKSCTDDGGSGGTEQVLCGHVYHANCITKWLSLHNSCPLCRSSIVSDD 457 VC CMEGF+S G +Q CGHVYHA CI+ WLS N CPLCR I ++ Sbjct: 74 VCIFCMEGFESSRIGG-----KQTPCGHVYHAACISSWLSYSNRCPLCRCHISGEE 124 >ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] Length = 116 Score = 70.1 bits (170), Expect = 2e-10 Identities = 32/69 (46%), Positives = 44/69 (63%) Frame = +2 Query: 263 MPSDISAVGVCTVCMEGFKSCTDDGGSGGTEQVLCGHVYHANCITKWLSLHNSCPLCRSS 442 +P+ +A VC VCME F D+GG +Q+ CGHVYH +C++ WLS+ +SCPLCR Sbjct: 48 LPTVAAADDVCAVCMEDF--LPDEGG----KQIPCGHVYHQSCLSSWLSIRDSCPLCRCH 101 Query: 443 IVSDDRKST 469 I D+ T Sbjct: 102 IAPGDKTET 110 >ref|XP_003630723.1| E3 ubiquitin-protein ligase CG7694 [Medicago truncatula] gi|355524745|gb|AET05199.1| E3 ubiquitin-protein ligase CG7694 [Medicago truncatula] Length = 106 Score = 68.9 bits (167), Expect = 4e-10 Identities = 30/58 (51%), Positives = 40/58 (68%) Frame = +2 Query: 272 DISAVGVCTVCMEGFKSCTDDGGSGGTEQVLCGHVYHANCITKWLSLHNSCPLCRSSI 445 D++ VC+VCME F+ + + GG ++V CGHVYH+NCIT WL +SCPLCR I Sbjct: 48 DVTKEDVCSVCMESFED-SHNSEEGGNKRVPCGHVYHSNCITLWLHRCSSCPLCRRHI 104