BLASTX nr result

ID: Panax21_contig00033358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033358
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11...    77   2e-12
emb|CBI28007.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002514155.1| hypothetical protein RCOM_1048070 [Ricinus c...    72   5e-11
ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    70   2e-10
ref|XP_003630723.1| E3 ubiquitin-protein ligase CG7694 [Medicago...    69   4e-10

>ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera]
          Length = 102

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = +2

Query: 263 MPSDISAVGVCTVCMEGFKSCTDDGGSGGTEQVLCGHVYHANCITKWLSLHNSCPLCRSS 442
           MP+ ++AV  CTVC EGF+S     G GG +Q+ CGH YHA CI  WLSL NSCPLCR S
Sbjct: 45  MPT-VTAVDACTVCREGFQS-----GEGG-KQLPCGHFYHAGCIASWLSLRNSCPLCRCS 97

Query: 443 IVSDD 457
           +  +D
Sbjct: 98  VPGED 102


>emb|CBI28007.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = +2

Query: 263 MPSDISAVGVCTVCMEGFKSCTDDGGSGGTEQVLCGHVYHANCITKWLSLHNSCPLCRSS 442
           MP+ ++AV  CTVC EGF+S     G GG +Q+ CGH YHA CI  WLSL NSCPLCR S
Sbjct: 111 MPT-VTAVDACTVCREGFQS-----GEGG-KQLPCGHFYHAGCIASWLSLRNSCPLCRCS 163

Query: 443 IVSDD 457
           +  +D
Sbjct: 164 VPGED 168


>ref|XP_002514155.1| hypothetical protein RCOM_1048070 [Ricinus communis]
           gi|223546611|gb|EEF48109.1| hypothetical protein
           RCOM_1048070 [Ricinus communis]
          Length = 124

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
 Frame = +2

Query: 119 FDLDVALTMEELNITSSVSGPDQXXXXXXXXXXAITNNINDIYRRRRMMPSDISAVG--- 289
           FDLDVALT++E++   +    +                    +R    MP+ I A     
Sbjct: 25  FDLDVALTLQEISHHQTTPANNSPQVVVPAD-----------HRHHNHMPTTIPATEDDE 73

Query: 290 VCTVCMEGFKSCTDDGGSGGTEQVLCGHVYHANCITKWLSLHNSCPLCRSSIVSDD 457
           VC  CMEGF+S    G     +Q  CGHVYHA CI+ WLS  N CPLCR  I  ++
Sbjct: 74  VCIFCMEGFESSRIGG-----KQTPCGHVYHAACISSWLSYSNRCPLCRCHISGEE 124


>ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 116

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = +2

Query: 263 MPSDISAVGVCTVCMEGFKSCTDDGGSGGTEQVLCGHVYHANCITKWLSLHNSCPLCRSS 442
           +P+  +A  VC VCME F    D+GG    +Q+ CGHVYH +C++ WLS+ +SCPLCR  
Sbjct: 48  LPTVAAADDVCAVCMEDF--LPDEGG----KQIPCGHVYHQSCLSSWLSIRDSCPLCRCH 101

Query: 443 IVSDDRKST 469
           I   D+  T
Sbjct: 102 IAPGDKTET 110


>ref|XP_003630723.1| E3 ubiquitin-protein ligase CG7694 [Medicago truncatula]
           gi|355524745|gb|AET05199.1| E3 ubiquitin-protein ligase
           CG7694 [Medicago truncatula]
          Length = 106

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = +2

Query: 272 DISAVGVCTVCMEGFKSCTDDGGSGGTEQVLCGHVYHANCITKWLSLHNSCPLCRSSI 445
           D++   VC+VCME F+  + +   GG ++V CGHVYH+NCIT WL   +SCPLCR  I
Sbjct: 48  DVTKEDVCSVCMESFED-SHNSEEGGNKRVPCGHVYHSNCITLWLHRCSSCPLCRRHI 104


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