BLASTX nr result

ID: Panax21_contig00033344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033344
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529931.1| Exosome complex exonuclease RRP41, putative ...    62   9e-08
ref|XP_002314284.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
gb|ABK96391.1| unknown [Populus trichocarpa x Populus deltoides]       59   1e-06
gb|ABK95685.1| unknown [Populus trichocarpa]                           59   1e-06
ref|XP_002328307.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06

>ref|XP_002529931.1| Exosome complex exonuclease RRP41, putative [Ricinus communis]
           gi|223530561|gb|EEF32439.1| Exosome complex exonuclease
           RRP41, putative [Ricinus communis]
          Length = 180

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 32/41 (78%), Positives = 36/41 (87%), Gaps = 3/41 (7%)
 Frame = +2

Query: 167 GSDCKEFSAMLQKALEGAIILDTFP---VHVFALVLESGGS 280
           GSDCKEFS+ML K+LEGAI+L+TFP   V VFALVLESGGS
Sbjct: 108 GSDCKEFSSMLHKSLEGAIMLETFPKTTVDVFALVLESGGS 148


>ref|XP_002314284.1| predicted protein [Populus trichocarpa] gi|222850692|gb|EEE88239.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 3/41 (7%)
 Frame = +2

Query: 167 GSDCKEFSAMLQKALEGAIILDTFP---VHVFALVLESGGS 280
           GSD KEFS+ML KALEGAI+L+TFP   V VFALVLESGGS
Sbjct: 109 GSDNKEFSSMLHKALEGAIMLETFPKTTVDVFALVLESGGS 149


>gb|ABK96391.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 257

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 3/41 (7%)
 Frame = +2

Query: 167 GSDCKEFSAMLQKALEGAIILDTFP---VHVFALVLESGGS 280
           GSD KEFS+ML KALEGAI+L+TFP   V VFALVLESGGS
Sbjct: 109 GSDNKEFSSMLHKALEGAIMLETFPKTTVDVFALVLESGGS 149


>gb|ABK95685.1| unknown [Populus trichocarpa]
          Length = 257

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 3/41 (7%)
 Frame = +2

Query: 167 GSDCKEFSAMLQKALEGAIILDTFP---VHVFALVLESGGS 280
           GSD KEFS+ML KALEGAI+L+TFP   V VFALVLESGGS
Sbjct: 109 GSDNKEFSSMLHKALEGAIMLETFPKTTVDVFALVLESGGS 149


>ref|XP_002328307.1| predicted protein [Populus trichocarpa] gi|222837822|gb|EEE76187.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/41 (75%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
 Frame = +2

Query: 167 GSDCKEFSAMLQKALEGAIILDTFP---VHVFALVLESGGS 280
           GSD KEFS ML KALEGA++L+TFP   V VFALVLESGGS
Sbjct: 115 GSDNKEFSTMLHKALEGAVMLETFPKTTVDVFALVLESGGS 155


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