BLASTX nr result
ID: Panax21_contig00033341
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033341 (626 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu... 297 9e-79 ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i... 282 3e-74 ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i... 282 3e-74 emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera] 282 3e-74 ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2... 272 4e-71 >ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis] gi|223540085|gb|EEF41662.1| RNA binding protein, putative [Ricinus communis] Length = 436 Score = 297 bits (761), Expect = 9e-79 Identities = 148/209 (70%), Positives = 163/209 (77%), Gaps = 1/209 (0%) Frame = +3 Query: 3 KHKMEGSTVPLVVKWADSEKERQARRAQKGQSQPPNMANADSPQHPSLFGALPMGYISSY 182 KHKMEGS+VPLVVKWAD+EKERQARRAQK QSQ N+ NADS QHPSLFGALPMGY+ Y Sbjct: 166 KHKMEGSSVPLVVKWADTEKERQARRAQKVQSQASNLPNADS-QHPSLFGALPMGYVPQY 224 Query: 183 NGYGYQAPGTYGLMQYRLPPLQNQHAFHNMLAPLNQGNALR-GVTPDLAPGMAPRNYTLP 359 NGYGYQAPGTYGLM YRLPPLQ+Q AFH+++ P+NQGNALR GV PDL P M PRNY LP Sbjct: 225 NGYGYQAPGTYGLMPYRLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALP 284 Query: 360 PASYVGSSYPSVTGVHYPLAYPGGMMGNRPLSGXXXXXXXXXXXXXXXXXXXXXXXXXGG 539 PASYVGS+YP+V G+ YP+AYPGGMM RPLS GG Sbjct: 285 PASYVGSAYPAVPGIQYPMAYPGGMMSPRPLSS-SPGAVSPTVGSSNSATSSGVSSSSGG 343 Query: 540 QLEGPPGANLFIYHIPQEFGDQELANAFQ 626 QLEGPPG+NLFIYHIPQEFGDQELA+AFQ Sbjct: 344 QLEGPPGSNLFIYHIPQEFGDQELASAFQ 372 >ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis vinifera] Length = 447 Score = 282 bits (722), Expect = 3e-74 Identities = 133/208 (63%), Positives = 161/208 (77%) Frame = +3 Query: 3 KHKMEGSTVPLVVKWADSEKERQARRAQKGQSQPPNMANADSPQHPSLFGALPMGYISSY 182 KHKMEGS+VPLVVKWAD+EKERQAR+AQK QSQ N+ +ADS QHPSLFGALP+GY+ Y Sbjct: 176 KHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPY 235 Query: 183 NGYGYQAPGTYGLMQYRLPPLQNQHAFHNMLAPLNQGNALRGVTPDLAPGMAPRNYTLPP 362 NGYGYQAPG YGLMQYR+PP+Q+Q AFHNM+ +NQG+A+R + PDLA +APRNY +P Sbjct: 236 NGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPS 295 Query: 363 ASYVGSSYPSVTGVHYPLAYPGGMMGNRPLSGXXXXXXXXXXXXXXXXXXXXXXXXXGGQ 542 ASY+GS+YP++ G+ YP+AY GG+M ++PLSG GGQ Sbjct: 296 ASYMGSAYPALPGLQYPMAYHGGIMSHQPLSG-SPGSRPPAMMTSNSPTNSGAGASSGGQ 354 Query: 543 LEGPPGANLFIYHIPQEFGDQELANAFQ 626 +EGPPGANLFIYHIPQEFGD ELA+AFQ Sbjct: 355 VEGPPGANLFIYHIPQEFGDHELAHAFQ 382 >ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis vinifera] gi|296086641|emb|CBI32276.3| unnamed protein product [Vitis vinifera] Length = 437 Score = 282 bits (722), Expect = 3e-74 Identities = 133/208 (63%), Positives = 161/208 (77%) Frame = +3 Query: 3 KHKMEGSTVPLVVKWADSEKERQARRAQKGQSQPPNMANADSPQHPSLFGALPMGYISSY 182 KHKMEGS+VPLVVKWAD+EKERQAR+AQK QSQ N+ +ADS QHPSLFGALP+GY+ Y Sbjct: 166 KHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPY 225 Query: 183 NGYGYQAPGTYGLMQYRLPPLQNQHAFHNMLAPLNQGNALRGVTPDLAPGMAPRNYTLPP 362 NGYGYQAPG YGLMQYR+PP+Q+Q AFHNM+ +NQG+A+R + PDLA +APRNY +P Sbjct: 226 NGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPS 285 Query: 363 ASYVGSSYPSVTGVHYPLAYPGGMMGNRPLSGXXXXXXXXXXXXXXXXXXXXXXXXXGGQ 542 ASY+GS+YP++ G+ YP+AY GG+M ++PLSG GGQ Sbjct: 286 ASYMGSAYPALPGLQYPMAYHGGIMSHQPLSG-SPGSRPPAMMTSNSPTNSGAGASSGGQ 344 Query: 543 LEGPPGANLFIYHIPQEFGDQELANAFQ 626 +EGPPGANLFIYHIPQEFGD ELA+AFQ Sbjct: 345 VEGPPGANLFIYHIPQEFGDHELAHAFQ 372 >emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera] Length = 450 Score = 282 bits (722), Expect = 3e-74 Identities = 133/208 (63%), Positives = 161/208 (77%) Frame = +3 Query: 3 KHKMEGSTVPLVVKWADSEKERQARRAQKGQSQPPNMANADSPQHPSLFGALPMGYISSY 182 KHKMEGS+VPLVVKWAD+EKERQAR+AQK QSQ N+ +ADS QHPSLFGALP+GY+ Y Sbjct: 220 KHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPY 279 Query: 183 NGYGYQAPGTYGLMQYRLPPLQNQHAFHNMLAPLNQGNALRGVTPDLAPGMAPRNYTLPP 362 NGYGYQAPG YGLMQYR+PP+Q+Q AFHNM+ +NQG+A+R + PDLA +APRNY +P Sbjct: 280 NGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPS 339 Query: 363 ASYVGSSYPSVTGVHYPLAYPGGMMGNRPLSGXXXXXXXXXXXXXXXXXXXXXXXXXGGQ 542 ASY+GS+YP++ G+ YP+AY GG+M ++PLSG GGQ Sbjct: 340 ASYMGSAYPALPGLQYPMAYHGGIMSHQPLSG-SPGSRPPAMMTSNSPTNSGAGASSGGQ 398 Query: 543 LEGPPGANLFIYHIPQEFGDQELANAFQ 626 +EGPPGANLFIYHIPQEFGD ELA+AFQ Sbjct: 399 VEGPPGANLFIYHIPQEFGDHELAHAFQ 426 >ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1| predicted protein [Populus trichocarpa] Length = 432 Score = 272 bits (695), Expect = 4e-71 Identities = 139/209 (66%), Positives = 158/209 (75%), Gaps = 1/209 (0%) Frame = +3 Query: 3 KHKMEGSTVPLVVKWADSEKERQARRAQKGQSQPPNMANADSPQHPSLFGALPMGYISSY 182 KHKMEGS+VPLVVKWAD+EKERQARRAQK QSQ M N DS QHPSLFGALPMGY Y Sbjct: 167 KHKMEGSSVPLVVKWADTEKERQARRAQKAQSQA--MPNTDS-QHPSLFGALPMGYAPPY 223 Query: 183 NGYGYQAPGTYGLMQYRLPPLQNQHAFHNMLAPLNQGNALR-GVTPDLAPGMAPRNYTLP 359 NGYGYQAPG YGLM YRLPP+QNQ AFH+M+ P+NQGN LR G+ PDL+P ++PRNY Sbjct: 224 NGYGYQAPGVYGLMPYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYA-- 281 Query: 360 PASYVGSSYPSVTGVHYPLAYPGGMMGNRPLSGXXXXXXXXXXXXXXXXXXXXXXXXXGG 539 PA+Y+GS+YP+VTG+ YP+AYPG MM +RPLS G Sbjct: 282 PATYMGSAYPTVTGLQYPVAYPGAMMTHRPLSS-SPGALSPTVVSSNSATPSGVGGSSGV 340 Query: 540 QLEGPPGANLFIYHIPQEFGDQELANAFQ 626 Q+EGPPGANLFIYHIPQEFGDQELANAF+ Sbjct: 341 QVEGPPGANLFIYHIPQEFGDQELANAFE 369