BLASTX nr result

ID: Panax21_contig00033331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033331
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40164.3| unnamed protein product [Vitis vinifera]              102   2e-19
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...   100   6e-19
ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]    95   3e-17
emb|CAN68677.1| hypothetical protein VITISV_041940 [Vitis vinifera]    95   4e-17
emb|CBI28933.3| unnamed protein product [Vitis vinifera]               92   3e-16

>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  102 bits (254), Expect = 2e-19
 Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 11/263 (4%)
 Frame = +3

Query: 33  RLPVKSLIRFRSVCKTWLALISSPNIIKSHLNRTSLNPNNDSLLVQRLPRPTQNHYDIAM 212
           RLPVKS++RFR VCK+W  L   P+ I  HL + S N +N  LL + L    Q  Y +  
Sbjct: 31  RLPVKSIVRFRCVCKSWCTLFDDPDFISMHLRQASAN-SNGRLLFKHLSSSEQEIYSLRS 89

Query: 213 LSRDPSDHNLWVSRNLNSMDWSIKFVGSINGLVCLHDSPCRTEF--VRVWLWNPATKQCK 386
                    L V   + S     + VGS NGL+CL +S  +  +  + ++LWNPA ++ +
Sbjct: 90  NIAFAEVRRLEVP--VPSKTDYYQIVGSSNGLICLTESNFKGSYLSLNLFLWNPAIREFQ 147

Query: 387 EILPLRTN-----YSVL*VGFGYDPVANDFKCVCINSDFASRSLATLECDVYSSKADSWN 551
            +     N       V+ +GF + PV ND+K V I     ++   T E DVYS +  SW 
Sbjct: 148 TLPKYHINNFTSPLMVVGLGFAFHPVINDYKVVRIVYFMRNK---TSEADVYSLRTGSWR 204

Query: 552 NGVALPNFEIRCSDLTIIVNGCPYWMYEKFSVFDNVLH-FYTFEVGYDVF--TLLPELSL 722
              A     I  +     +NG  +W+  K +  DN  +   +F++  DVF   +LP+   
Sbjct: 205 KVDANICCYIHSNVSRTFINGALHWLAGKKNEMDNTDNLILSFDMAKDVFKEIMLPDFG- 263

Query: 723 AKYPKSSWRCV-NLKDSLATMVW 788
             Y +   +C+ + K SL+ + +
Sbjct: 264 --YDELIRKCLADYKGSLSVLFY 284


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  100 bits (250), Expect = 6e-19
 Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 25/272 (9%)
 Frame = +3

Query: 6   EIVEEQILTRLPVKSLIRFRSVCKTWLALISSPNIIKSHLNRTSLNPNNDSLLVQRLPRP 185
           EI+ E IL+RLPVK L+RF+ V KTW +LIS P  +K+HL RT  + N            
Sbjct: 11  EIISE-ILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTN------------ 57

Query: 186 TQNHYDIAMLSRDPS---DHNLWVSRNLNSMDWSIKF------------VGSINGLVC-- 314
             NHY I  LS DP    D   +   + N +   +KF            +GS NGLVC  
Sbjct: 58  -ANHYKI-FLSTDPHLSIDPEAYFDADDNLLTTQLKFPVSYPEYSYIEILGSCNGLVCGL 115

Query: 315 LHDSPCRTEFVRVWLWNPATKQCKEILPLRTNYSVL*VGFGYDPVANDFKCVCINSDFAS 494
           +HD+P       +++WNP+T++ +E+    ++      GFGYD   +D+K V ++   ++
Sbjct: 116 IHDNPL------IYIWNPSTRESRELAIPGSSEDDAFYGFGYDVKLDDYKIVRVSISTST 169

Query: 495 RSL----ATLECDVYSSKADSWNNGVALPNFEIRCSDLT----IIVNGCPYWMYEKFSVF 650
            S     +  + +V++ K++ W         ++RCS L      + NG  +W+  + +  
Sbjct: 170 NSTDGSNSETKVEVFTLKSNIWRT-----IQDLRCSVLLEGPGTLANGALHWLVRQENGG 224

Query: 651 DNVLHFYTFEVGYDVFTLLPELSLAKYPKSSW 746
                  +F++  + F  +  L       SSW
Sbjct: 225 SKKCVMVSFDLSEEKFLEMVPLRGLTEDDSSW 256


>ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]
          Length = 408

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 70/214 (32%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
 Frame = +3

Query: 3   EEIVEEQILTRLPVKSLIRFRSVCKTWLALISSPNIIKSHLNRTSLNPNNDSLLVQRLPR 182
           EEI+EE IL RLPVKSL+RFR VCK W  LIS P   K+HL R   +P    L+   +  
Sbjct: 6   EEIIEE-ILLRLPVKSLLRFRCVCKAWCTLISQPQFTKAHLCRQRTHPITQILVPPSVDS 64

Query: 183 PTQNHYDIAMLSRDPSDHNLWVSRNLNSMDWSIKFVGSINGLVCLHDS----PCRTEFVR 350
              + + +          +L     L+S   S   + S +GL+CL D             
Sbjct: 65  QPNDGFSV----------DLDFPLGLSSSKGSTAILDSCHGLLCLVDGFYGFHIHQPPHE 114

Query: 351 VWLWNPATKQCKEI-LPLRTNYSVL*VGFGYDPVANDFKCVCINSDFASRSLATLECDVY 527
           + LWNP+T+Q   +  P   NYS    GFGYD  ++D+K V +   F+  +      DV+
Sbjct: 115 LVLWNPSTRQSNHLPFPSFVNYSSCLYGFGYDSYSDDYKIVRV---FSLSATHRTGFDVF 171

Query: 528 SSKADSWNNGVALPNFEIRCSDLTIIVNGCPYWM 629
           S K ++W    A  +  I   +L     G  +W+
Sbjct: 172 SLKTNNWRRVQATHSSVIE-YELATFFKGSVHWL 204


>emb|CAN68677.1| hypothetical protein VITISV_041940 [Vitis vinifera]
          Length = 485

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 24/247 (9%)
 Frame = +3

Query: 24  ILTRLPVKSLIRFRSVCKTWLALISSPNIIKSHLNRTSLNPNNDSLLVQRLPRPTQNHYD 203
           +L RLPVKS+IRF+ VC++W  L + P+ I  HL R ++  NN  +L++ L    +  Y 
Sbjct: 91  VLLRLPVKSIIRFKCVCQSWQTLFNDPDFINMHLRR-AITHNNCCMLLKYLSSSEEEVYS 149

Query: 204 IAMLSRDPSDHNLWVSRNLNSMDWSIKFVGSINGLVCLHDSPCRTEFVRV--WLWNPATK 377
           +           L V   + S       VGS NGL+CL +S  +  +V V  +LWNP+  
Sbjct: 150 LRCDKDFAEFRRLQVP--VPSKTDYYHIVGSSNGLICLTESNNKGSYVTVDTFLWNPSVT 207

Query: 378 QCKEILP-------LRTNYSVL*VGFGYDPVANDFKCVCINSDFASRSLATLECDVYSSK 536
              + LP       + + + V+ +GF + P  +D+K V I     S+   T E  VYS K
Sbjct: 208 AQWKPLPKYLINNMMTSPFMVVGLGFAFHPQIDDYKVVRIVYFLKSK---TYEVHVYSLK 264

Query: 537 ADSWNNGVALPNFEIRCSDLTIIVNGCPYWMYEKFS---------------VFDNVLHFY 671
            D+W N  A  +  I  +     VNG  +W+  K +               V DN+    
Sbjct: 265 QDAWKNIDAKVHCHIHDTVSRTFVNGALHWLAAKKNQGRGKSDDLILSFDMVEDNLREMI 324

Query: 672 TFEVGYD 692
             E GYD
Sbjct: 325 LPEFGYD 331


>emb|CBI28933.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 24/247 (9%)
 Frame = +3

Query: 24  ILTRLPVKSLIRFRSVCKTWLALISSPNIIKSHLNRTSLNPNNDSLLVQRLPRPTQNHYD 203
           +L RLPVKS+IRF+ VC++W  L + P+ I  +L R ++  NN  +L++ L    +  Y 
Sbjct: 29  VLLRLPVKSIIRFKCVCQSWQTLFNDPDFINMNLRR-AITHNNCCMLLKYLSSSEEEVYS 87

Query: 204 IAMLSRDPSDHNLWVSRNLNSMDWSIKFVGSINGLVCLHDSPCRTEFVRV--WLWNPATK 377
           +           L V   + S       VGS NGL+CL +S  +  +V V  +LWNP+  
Sbjct: 88  LRCDKDFAEFRRLQVP--VPSKTDYYHIVGSSNGLICLTESNNKGSYVTVDTFLWNPSVT 145

Query: 378 QCKEILP-------LRTNYSVL*VGFGYDPVANDFKCVCINSDFASRSLATLECDVYSSK 536
              + LP       + + + V+ +GF + P  +D+K V I     S+   T E  VYS K
Sbjct: 146 AQWKPLPKYLINNMMTSPFMVVGLGFAFHPQIDDYKVVRIVYFLKSK---TYEVHVYSLK 202

Query: 537 ADSWNNGVALPNFEIRCSDLTIIVNGCPYWMYEKFS---------------VFDNVLHFY 671
            D+W N  A  +  I  +     VNG  +W+  K +               V DN+    
Sbjct: 203 QDAWKNIDAKVHCHIHDTVSRTFVNGALHWLAAKKNQGRGKSDDLILSFDMVEDNLREMI 262

Query: 672 TFEVGYD 692
             E GYD
Sbjct: 263 LPEFGYD 269


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