BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033319
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis...   113   2e-23
emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]   113   2e-23
gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]     111   1e-22
gb|AAF79736.1|AC005106_17 T25N20.11 [Arabidopsis thaliana]            111   1e-22
ref|NP_172037.1| putative RNA helicase SDE3 [Arabidopsis thalian...   111   1e-22

>ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis vinifera]
            gi|297737082|emb|CBI26283.3| unnamed protein product
            [Vitis vinifera]
          Length = 877

 Score =  113 bits (283), Expect = 2e-23
 Identities = 56/103 (54%), Positives = 70/103 (67%)
 Frame = -1

Query: 618  FLSNPRRFNVAITRAKSLLVVIGNPHIVCKDPYWNKLLWHCHDNSSYRGCFLPDREELLD 439
            FLSNPRRFNVAITRAKSLL++IGNPHI+ KD YWNK+LWHC DN SY+GC LP+R++ +D
Sbjct: 770  FLSNPRRFNVAITRAKSLLIIIGNPHIISKDLYWNKILWHCSDNDSYQGCALPERQDFVD 829

Query: 438  KNLAQVDNLDNEQEYRLQRWKDGEWGQGSEDGEWGGQPSEDVA 310
            K   Q     N +E   Q   + E G+     E   +P +D A
Sbjct: 830  KEPVQFS--FNHEEENPQPSNEVERGEEPFQAEEIPKPVKDEA 870


>emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]
          Length = 877

 Score =  113 bits (283), Expect = 2e-23
 Identities = 56/103 (54%), Positives = 70/103 (67%)
 Frame = -1

Query: 618  FLSNPRRFNVAITRAKSLLVVIGNPHIVCKDPYWNKLLWHCHDNSSYRGCFLPDREELLD 439
            FLSNPRRFNVAITRAKSLL++IGNPHI+ KD YWNK+LWHC DN SY+GC LP+R++ +D
Sbjct: 770  FLSNPRRFNVAITRAKSLLIIIGNPHIISKDLYWNKILWHCSDNDSYQGCALPERQDFVD 829

Query: 438  KNLAQVDNLDNEQEYRLQRWKDGEWGQGSEDGEWGGQPSEDVA 310
            K   Q     N +E   Q   + E G+     E   +P +D A
Sbjct: 830  KEPVQFS--FNHEEENPQPSNEVERGEEPFQAEEIPKPVKDEA 870


>gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]
          Length = 1002

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
 Frame = -1

Query: 618  FLSNPRRFNVAITRAKSLLVVIGNPHIVCKDPYWNKLLWHCHDNSSYRGCFLPDREELLD 439
            FLSNPRRFNVAITRA SLLV+IGNPHI+CKD  WNKLLW C DN++Y+GC LP++EE ++
Sbjct: 772  FLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVE 831

Query: 438  KNLAQVDNLDNEQEYRLQRWKD-GEWGQG--SEDGEW 337
            +   Q  + +  Q      W + GE   G  +E+GEW
Sbjct: 832  EPFKQEGSSNGPQYPPEAEWNNSGELNNGGANENGEW 868


>gb|AAF79736.1|AC005106_17 T25N20.11 [Arabidopsis thaliana]
          Length = 1048

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
 Frame = -1

Query: 618  FLSNPRRFNVAITRAKSLLVVIGNPHIVCKDPYWNKLLWHCHDNSSYRGCFLPDREELLD 439
            FLSNPRRFNVAITRA SLLV+IGNPHI+CKD  WNKLLW C DN++Y+GC LP++EE ++
Sbjct: 818  FLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVE 877

Query: 438  KNLAQVDNLDNEQEYRLQRWKD-GEWGQG--SEDGEW 337
            +   Q  + +  Q      W + GE   G  +E+GEW
Sbjct: 878  EPFKQEGSSNGPQYPPEAEWNNSGELNNGGANENGEW 914


>ref|NP_172037.1| putative RNA helicase SDE3 [Arabidopsis thaliana]
            gi|50401594|sp|Q8GYD9.1|SDE3_ARATH RecName: Full=Probable
            RNA helicase SDE3; AltName: Full=Silencing defective
            protein 3 gi|26450472|dbj|BAC42350.1| unknown protein
            [Arabidopsis thaliana] gi|332189722|gb|AEE27843.1|
            putative RNA helicase SDE3 [Arabidopsis thaliana]
          Length = 1002

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
 Frame = -1

Query: 618  FLSNPRRFNVAITRAKSLLVVIGNPHIVCKDPYWNKLLWHCHDNSSYRGCFLPDREELLD 439
            FLSNPRRFNVAITRA SLLV+IGNPHI+CKD  WNKLLW C DN++Y+GC LP++EE ++
Sbjct: 772  FLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVE 831

Query: 438  KNLAQVDNLDNEQEYRLQRWKD-GEWGQG--SEDGEW 337
            +   Q  + +  Q      W + GE   G  +E+GEW
Sbjct: 832  EPFKQEGSSNGPQYPPEAEWNNSGELNNGGANENGEW 868