BLASTX nr result

ID: Panax21_contig00033303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033303
         (1211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74566.1| integrase [Boechera divaricarpa]                       419   e-115
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   403   e-110
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   400   e-109
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   391   e-106
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   374   e-101

>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  419 bits (1076), Expect = e-115
 Identities = 198/326 (60%), Positives = 251/326 (76%)
 Frame = +3

Query: 21   DILIICVYVDYIIYTSSSNTLVKEFKVSMMREFDMTDLGSMHYFLGIQVQQTDEGIFIYQ 200
            DIL++C+YVD +IY  SS +LV EFK SMM +F+MTDLG +++FLG++V+Q ++G+F+ Q
Sbjct: 837  DILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLEVKQVEDGVFVSQ 896

Query: 201  EKYARELLKKFNMMGCKTSSTPMNPNEKLCAKDGTARADERIFRSMIGGLMYLTNTRPDI 380
             KYA +LLK+F+M GC    TPMN NEKL A DGT +AD   FRS++GGL+YLT+TRPDI
Sbjct: 897  HKYACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIYLTHTRPDI 956

Query: 381  MFSVSLLSRFMHTPTMHHLGTAKRILRYVQETSNYGIWYKPAAEFSLIGFTDSDWAGFVD 560
             F+VS +SRFMH PT  H G AKR+LRY+  T+ YG+WY   ++F L+GFTDSDWAG V 
Sbjct: 957  CFAVSAISRFMHGPTKQHFGAAKRLLRYIARTAEYGLWYCSVSKFKLVGFTDSDWAGCVQ 1016

Query: 561  DRKSTSGFIFTLGSGAVSWSSKKQASVALLSSEVEYIAASSATCQSIWMRRILEDLHQVQ 740
            DRKSTSG +F LGSGAV WSSKKQ   AL SSE EY AA++A CQ++W+RRIL D+ Q Q
Sbjct: 1017 DRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATAAACQAVWLRRILADIKQEQ 1076

Query: 741  GAATKIYCDNKATISMTKNPVFHGRTKHIELRHHFIREVVANGTVIMEHCSTNDQSADGF 920
              AT I+CDNKATI+M KNP +HGRTKHI ++ HFIR++V+ G+V +E+CSTN+QSAD  
Sbjct: 1077 EKATTIFCDNKATIAMNKNPAYHGRTKHISIKVHFIRDLVSEGSVTLEYCSTNEQSADVL 1136

Query: 921  TKALSYPKFVKFRSSLNVSSFASKGS 998
            TKALS  KF  FRS L V  F S  S
Sbjct: 1137 TKALSRNKFDYFRSKLGVCKFESMES 1162


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  403 bits (1035), Expect = e-110
 Identities = 187/317 (58%), Positives = 249/317 (78%)
 Frame = +3

Query: 48   DYIIYTSSSNTLVKEFKVSMMREFDMTDLGSMHYFLGIQVQQTDEGIFIYQEKYARELLK 227
            D +IY  SS++L+ EFK  M ++F+M+DLG +H+FLG++V+Q ++G+F+ Q KYA +LLK
Sbjct: 864  DDMIYMGSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLK 923

Query: 228  KFNMMGCKTSSTPMNPNEKLCAKDGTARADERIFRSMIGGLMYLTNTRPDIMFSVSLLSR 407
            KFNM+ CK  +TPMN NEKL A+DGT RAD R FRS++GGL+YLT+TRPD  F+V ++SR
Sbjct: 924  KFNMLNCKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDXAFAVGVISR 983

Query: 408  FMHTPTMHHLGTAKRILRYVQETSNYGIWYKPAAEFSLIGFTDSDWAGFVDDRKSTSGFI 587
            FMH P+  HLG AKR+LRY+  T ++ IWY    EF L+G+TDSDWAG ++DRKSTSG++
Sbjct: 984  FMHCPSKQHLGAAKRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYM 1043

Query: 588  FTLGSGAVSWSSKKQASVALLSSEVEYIAASSATCQSIWMRRILEDLHQVQGAATKIYCD 767
            F+LGSGAV WSSKKQA  AL SSE EY AA+S+ CQ++W+RRIL D++Q     T IYCD
Sbjct: 1044 FSLGSGAVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRILVDINQEHEEXTVIYCD 1103

Query: 768  NKATISMTKNPVFHGRTKHIELRHHFIREVVANGTVIMEHCSTNDQSADGFTKALSYPKF 947
            NKA I+MTKNP +HGRTKH+++R HFIR++V  G V++++C+TN+Q AD  TKALS  K 
Sbjct: 1104 NKAAIAMTKNPAYHGRTKHVBIRVHFIRDLVVEGXVVLQYCNTNEQVADVRTKALSRDKH 1163

Query: 948  VKFRSSLNVSSFASKGS 998
            V FRS L V +F S+GS
Sbjct: 1164 VYFRSKLGVCNFESRGS 1180


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  400 bits (1028), Expect = e-109
 Identities = 186/317 (58%), Positives = 246/317 (77%)
 Frame = +3

Query: 48   DYIIYTSSSNTLVKEFKVSMMREFDMTDLGSMHYFLGIQVQQTDEGIFIYQEKYARELLK 227
            D +IY  SS+ L+ EFK  M ++F+M+ LG +H FLG++V+Q ++G+F+ Q KYA +LLK
Sbjct: 955  DDMIYMGSSSXLINEFKACMKKKFEMSXLGLLHXFLGLEVKQVEDGVFVSQRKYAVDLLK 1014

Query: 228  KFNMMGCKTSSTPMNPNEKLCAKDGTARADERIFRSMIGGLMYLTNTRPDIMFSVSLLSR 407
            KFNM+ CK  +TPMN NEKL A+DGT RAD R FRS++GGL+YLT+TRPDI F+V ++SR
Sbjct: 1015 KFNMLNCKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISR 1074

Query: 408  FMHTPTMHHLGTAKRILRYVQETSNYGIWYKPAAEFSLIGFTDSDWAGFVDDRKSTSGFI 587
            FMH P+  HLG AKR+LRY+  T ++GIWY    EF L+G+TDSDWAG ++DRKS SG++
Sbjct: 1075 FMHCPSKQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSXSGYM 1134

Query: 588  FTLGSGAVSWSSKKQASVALLSSEVEYIAASSATCQSIWMRRILEDLHQVQGAATKIYCD 767
            F+LGSGAV WSSKKQA  AL S E EY AA+S+ CQ++W+RRIL D++Q     T IYCD
Sbjct: 1135 FSLGSGAVCWSSKKQAVTALSSXEAEYTAATSSXCQAVWLRRILADINQEHEEPTVIYCD 1194

Query: 768  NKATISMTKNPVFHGRTKHIELRHHFIREVVANGTVIMEHCSTNDQSADGFTKALSYPKF 947
            NKA I+MTKNP +HGRTKH+++R HFIR++V  G V++++C+TN+Q AD  TKALS  K 
Sbjct: 1195 NKAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKH 1254

Query: 948  VKFRSSLNVSSFASKGS 998
            V FRS L V +F S+GS
Sbjct: 1255 VYFRSKLGVCNFESRGS 1271


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  391 bits (1004), Expect = e-106
 Identities = 185/328 (56%), Positives = 251/328 (76%)
 Frame = +3

Query: 15   TSDILIICVYVDYIIYTSSSNTLVKEFKVSMMREFDMTDLGSMHYFLGIQVQQTDEGIFI 194
            T + L++C+YVD +IY  SS +LV +FK +MMR F+M+DLG + YFLG++V Q  +GIFI
Sbjct: 1004 TDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFI 1063

Query: 195  YQEKYARELLKKFNMMGCKTSSTPMNPNEKLCAKDGTARADERIFRSMIGGLMYLTNTRP 374
             Q+KYA +LLKKF MM C+ ++TPMN NEKL   DGT +A+ ++FRS++GGL YLT+TRP
Sbjct: 1064 SQKKYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRP 1123

Query: 375  DIMFSVSLLSRFMHTPTMHHLGTAKRILRYVQETSNYGIWYKPAAEFSLIGFTDSDWAGF 554
            DI FSVS++SRF+ +PT  H G AKR+LRYV  T+++GIWY  A  F L+GFTDSD+AG 
Sbjct: 1124 DIAFSVSVVSRFLQSPTKQHFGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGC 1183

Query: 555  VDDRKSTSGFIFTLGSGAVSWSSKKQASVALLSSEVEYIAASSATCQSIWMRRILEDLHQ 734
            +DDRKSTSG  F+ GSG V+WSSKKQ +VAL +SE EY AAS A  Q++W+R++LED   
Sbjct: 1184 LDDRKSTSGSCFSFGSGVVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSY 1243

Query: 735  VQGAATKIYCDNKATISMTKNPVFHGRTKHIELRHHFIREVVANGTVIMEHCSTNDQSAD 914
             Q  +T+I+ D+K+ I+M KNP FHGRTKHI++++HFIR +VA+G ++++ CSTN+Q+AD
Sbjct: 1244 EQKESTEIFSDSKSAIAMAKNPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQAAD 1303

Query: 915  GFTKALSYPKFVKFRSSLNVSSFASKGS 998
             FTK+L   K   FR  L V  F S+GS
Sbjct: 1304 IFTKSLPQAKHEYFRLQLGVCDFESRGS 1331


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  374 bits (959), Expect = e-101
 Identities = 175/327 (53%), Positives = 240/327 (73%)
 Frame = +3

Query: 18   SDILIICVYVDYIIYTSSSNTLVKEFKVSMMREFDMTDLGSMHYFLGIQVQQTDEGIFIY 197
            +D+LIIC+YVD +IY  SS++L+ EFK  M ++F+M+DLG +H+FLG++V+Q ++G+F+ 
Sbjct: 1105 NDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVS 1164

Query: 198  QEKYARELLKKFNMMGCKTSSTPMNPNEKLCAKDGTARADERIFRSMIGGLMYLTNTRPD 377
            Q KYA +LLKKFNM+ CK  + PMN NEKL A+DGT RAD R FRS++GGL+YLT+TRPD
Sbjct: 1165 QRKYAVDLLKKFNMLNCKVVAIPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPD 1224

Query: 378  IMFSVSLLSRFMHTPTMHHLGTAKRILRYVQETSNYGIWYKPAAEFSLIGFTDSDWAGFV 557
            I F+V ++SRFMH P+  HLG  KR+LRY+  T ++ IW     EF L+G+TDSDWAG +
Sbjct: 1225 IAFAVGVISRFMHCPSKQHLGATKRLLRYIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCL 1284

Query: 558  DDRKSTSGFIFTLGSGAVSWSSKKQASVALLSSEVEYIAASSATCQSIWMRRILEDLHQV 737
            +DRKSTSG++F+LGS                    EY  A+S+ CQ++W+RRIL D++Q 
Sbjct: 1285 EDRKSTSGYMFSLGS-------------------AEYTVATSSACQAVWLRRILADINQE 1325

Query: 738  QGAATKIYCDNKATISMTKNPVFHGRTKHIELRHHFIREVVANGTVIMEHCSTNDQSADG 917
                T IYCDNKA I+MTKNP +HGRTKH+++R HFIR++V  G V++++C+TN+Q AD 
Sbjct: 1326 HEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADV 1385

Query: 918  FTKALSYPKFVKFRSSLNVSSFASKGS 998
             TKALS  K V FRS L V +F S+ S
Sbjct: 1386 LTKALSRDKHVYFRSKLGVCNFESRRS 1412



 Score =  159 bits (402), Expect = 1e-36
 Identities = 76/153 (49%), Positives = 97/153 (63%)
 Frame = +3

Query: 411 MHTPTMHHLGTAKRILRYVQETSNYGIWYKPAAEFSLIGFTDSDWAGFVDDRKSTSGFIF 590
           MH  +  HLG A R+LRY+  T ++ IWY    EF L+G+TDSDWAG V           
Sbjct: 1   MHCSSKQHLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGXV----------- 49

Query: 591 TLGSGAVSWSSKKQASVALLSSEVEYIAASSATCQSIWMRRILEDLHQVQGAATKIYCDN 770
                   W SKKQA   L SSE EY A +S+ CQ++W+RRIL D++Q     T IYCDN
Sbjct: 50  -------CWXSKKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDN 102

Query: 771 KATISMTKNPVFHGRTKHIELRHHFIREVVANG 869
           KA I+MTKNP +HGRTKH+++R HFIR++V  G
Sbjct: 103 KAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEG 135


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