BLASTX nr result

ID: Panax21_contig00033296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033296
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307967.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002517323.1| DNA binding protein, putative [Ricinus commu...   132   2e-29
gb|ADL36594.1| BHLH domain class transcription factor [Malus x d...   131   6e-29
gb|ACN21649.1| putative basic helix-loop-helix protein BHLH24 [L...   129   3e-28
ref|XP_002282625.1| PREDICTED: transcription factor bHLH106 [Vit...   128   5e-28

>ref|XP_002307967.1| predicted protein [Populus trichocarpa] gi|222853943|gb|EEE91490.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  134 bits (337), Expect = 8e-30
 Identities = 73/128 (57%), Positives = 90/128 (70%), Gaps = 2/128 (1%)
 Frame = +3

Query: 3   DKATLLAKVVQRLKELKQQSSDIMQLQSFPXXXXXXXXXXXXXXQT--LFIKASFCCEDR 176
           DKA+LLAKVVQR++ELKQQ+S++  L+SFP                  L  KAS CCEDR
Sbjct: 43  DKASLLAKVVQRVRELKQQTSELPGLESFPSETDEVTVLSGEYSSDGQLIFKASLCCEDR 102

Query: 177 SDLIPDLVETLKSLRLSPLRAEMVTFGGRIRNVLIVSGDKHQSDEVVEFLREALRSLVQR 356
           SDL+PDL+E LKSL L  L+AEMVT GGRIRNVLI++ DK  S E V FL+ AL+SL++R
Sbjct: 103 SDLMPDLIEILKSLHLKTLKAEMVTLGGRIRNVLIIAADKDHSVESVHFLQNALKSLLER 162

Query: 357 SSSDSRLK 380
           S+S  R K
Sbjct: 163 SNSSERSK 170


>ref|XP_002517323.1| DNA binding protein, putative [Ricinus communis]
           gi|223543586|gb|EEF45116.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 237

 Score =  132 bits (333), Expect = 2e-29
 Identities = 73/128 (57%), Positives = 88/128 (68%), Gaps = 2/128 (1%)
 Frame = +3

Query: 3   DKATLLAKVVQRLKELKQQSSDIMQLQSFPXXXXXXXXXXXXXXQT--LFIKASFCCEDR 176
           DKA+LLAKVVQR++ELKQQ+S I  L SFP                  L  KAS CCEDR
Sbjct: 98  DKASLLAKVVQRVRELKQQTSQIPGLDSFPSETDEITVLSGEYSSDGQLIFKASLCCEDR 157

Query: 177 SDLIPDLVETLKSLRLSPLRAEMVTFGGRIRNVLIVSGDKHQSDEVVEFLREALRSLVQR 356
           SDL+PDL+E LKSL L  L+AEMVT GGRIRNVLI++ +K  S E V FL+ AL+SL++R
Sbjct: 158 SDLLPDLIEILKSLHLKTLKAEMVTLGGRIRNVLIIAAEKDHSIESVHFLQTALKSLIER 217

Query: 357 SSSDSRLK 380
           S+S  R K
Sbjct: 218 SNSSDRSK 225


>gb|ADL36594.1| BHLH domain class transcription factor [Malus x domestica]
          Length = 240

 Score =  131 bits (329), Expect = 6e-29
 Identities = 70/129 (54%), Positives = 90/129 (69%), Gaps = 3/129 (2%)
 Frame = +3

Query: 3   DKATLLAKVVQRLKELKQQSSDIMQLQSFPXXXXXXXXXXXXXXQT---LFIKASFCCED 173
           DKA+LLAKVVQR+KELKQQ+S+I +L++FP                   +  KAS CCED
Sbjct: 101 DKASLLAKVVQRVKELKQQTSEIAELETFPSETDEITVLSSNDYTNDGRIVFKASLCCED 160

Query: 174 RSDLIPDLVETLKSLRLSPLRAEMVTFGGRIRNVLIVSGDKHQSDEVVEFLREALRSLVQ 353
           RSDL+PDL+E LKSL L  ++AE+ T GGRIRNVLIV+ DK  + E V FL+ AL+SL++
Sbjct: 161 RSDLLPDLIEILKSLHLKTIKAEIATLGGRIRNVLIVAADKDHTIESVNFLQNALKSLLE 220

Query: 354 RSSSDSRLK 380
           RS+S  R K
Sbjct: 221 RSNSSERSK 229


>gb|ACN21649.1| putative basic helix-loop-helix protein BHLH24 [Lotus japonicus]
          Length = 171

 Score =  129 bits (323), Expect = 3e-28
 Identities = 72/128 (56%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
 Frame = +3

Query: 3   DKATLLAKVVQRLKELKQQSSDIMQLQSFPXXXXXXXXXXXXXXQT--LFIKASFCCEDR 176
           DKA+LLAKVVQR+KELKQQ+S+I  L++ P                  L  KAS CCEDR
Sbjct: 33  DKASLLAKVVQRVKELKQQTSEITNLETVPSETDEISVLSSGGAGDGRLIFKASLCCEDR 92

Query: 177 SDLIPDLVETLKSLRLSPLRAEMVTFGGRIRNVLIVSGDKHQSDEVVEFLREALRSLVQR 356
           SDLIPDL+E LKSL L  L+AEM T GGR RNVLIV+ +K  S E + FL+ +LRSL+ R
Sbjct: 93  SDLIPDLIEILKSLHLKTLKAEMATLGGRTRNVLIVAAEKDHSIESIHFLQNSLRSLLDR 152

Query: 357 SSSDSRLK 380
           SSS  R K
Sbjct: 153 SSSGDRSK 160


>ref|XP_002282625.1| PREDICTED: transcription factor bHLH106 [Vitis vinifera]
           gi|297741653|emb|CBI32785.3| unnamed protein product
           [Vitis vinifera]
          Length = 239

 Score =  128 bits (321), Expect = 5e-28
 Identities = 68/129 (52%), Positives = 88/129 (68%), Gaps = 3/129 (2%)
 Frame = +3

Query: 3   DKATLLAKVVQRLKELKQQSSDIMQLQSFPXXXXXXXXXXXXXXQT---LFIKASFCCED 173
           DKA+LLAKV+QR+KELK+Q+S+I QL++ P                      KAS CCED
Sbjct: 98  DKASLLAKVIQRVKELKEQTSEITQLETLPSETDEINVILSGDYSDDGKSIFKASLCCED 157

Query: 174 RSDLIPDLVETLKSLRLSPLRAEMVTFGGRIRNVLIVSGDKHQSDEVVEFLREALRSLVQ 353
           R++L+P+L+E LKSLRL  L+AEM + GGRIRN+L+VSGD   SDE V  LR+AL++LV 
Sbjct: 158 RTELLPELIEILKSLRLKTLKAEMASLGGRIRNILVVSGDGDHSDESVHSLRDALKTLVD 217

Query: 354 RSSSDSRLK 380
            SSS  R K
Sbjct: 218 HSSSSGRSK 226


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