BLASTX nr result

ID: Panax21_contig00033295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033295
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320090.1| f-box family protein [Populus trichocarpa] g...   199   3e-49
ref|XP_003521314.1| PREDICTED: F-box protein PP2-A13-like [Glyci...   194   1e-47
ref|XP_003528884.1| PREDICTED: F-box protein PP2-A13-like [Glyci...   193   2e-47
ref|XP_002510835.1| ATPP2-A13, putative [Ricinus communis] gi|22...   192   5e-47
ref|XP_002279586.1| PREDICTED: F-box protein PP2-A13 [Vitis vini...   188   5e-46

>ref|XP_002320090.1| f-box family protein [Populus trichocarpa]
           gi|222860863|gb|EEE98405.1| f-box family protein
           [Populus trichocarpa]
          Length = 294

 Score =  199 bits (506), Expect = 3e-49
 Identities = 91/138 (65%), Positives = 109/138 (78%)
 Frame = +1

Query: 187 PGIEDIPESCVALILTYLDTTEICKLACLNRAFYRASSADLLWESKLPENYQILVKKLFN 366
           P + DIPESC+AL+L +LD  +ICKLA LNRAF+ ASSAD +WESKLP NY+ + +K+ +
Sbjct: 22  PRLGDIPESCLALVLMHLDPPDICKLARLNRAFHGASSADFIWESKLPSNYKFICEKVLD 81

Query: 367 FERTENLVKKDIYAMLCRPNRFDGGTKEVWLEKNGGGVCVCVSWKGLKITGIHDRRYWNH 546
            +    L KKD+YA +CRPN FDGGTKEVWL+K  GG C  +S KGL ITGI DRRYWNH
Sbjct: 82  EKTVVGLEKKDVYARMCRPNPFDGGTKEVWLDKKTGGACFSISSKGLAITGIDDRRYWNH 141

Query: 547 ISTHESRFHTIAYLQQIW 600
           IST ESRFHT+AYLQQIW
Sbjct: 142 ISTEESRFHTVAYLQQIW 159


>ref|XP_003521314.1| PREDICTED: F-box protein PP2-A13-like [Glycine max]
          Length = 281

 Score =  194 bits (493), Expect = 1e-47
 Identities = 91/138 (65%), Positives = 107/138 (77%)
 Frame = +1

Query: 187 PGIEDIPESCVALILTYLDTTEICKLACLNRAFYRASSADLLWESKLPENYQILVKKLFN 366
           P + DIPESCVAL+L YLD  +ICKLA LNRAF  ASSAD +WESKLP NY+ +V+K   
Sbjct: 19  PRLGDIPESCVALVLMYLDPPDICKLARLNRAFRDASSADFIWESKLPLNYKFIVEKALK 78

Query: 367 FERTENLVKKDIYAMLCRPNRFDGGTKEVWLEKNGGGVCVCVSWKGLKITGIHDRRYWNH 546
               E L K+DIYA LCRPN FD GTKE+WL+K  GGVC+ +S + L+ITGI DRRYW+ 
Sbjct: 79  DVSVEQLGKRDIYARLCRPNSFDNGTKEIWLDKRTGGVCLAISSQALRITGIDDRRYWSR 138

Query: 547 ISTHESRFHTIAYLQQIW 600
           IST ESRFHT+AYLQQIW
Sbjct: 139 ISTEESRFHTVAYLQQIW 156


>ref|XP_003528884.1| PREDICTED: F-box protein PP2-A13-like [Glycine max]
          Length = 281

 Score =  193 bits (491), Expect = 2e-47
 Identities = 90/138 (65%), Positives = 106/138 (76%)
 Frame = +1

Query: 187 PGIEDIPESCVALILTYLDTTEICKLACLNRAFYRASSADLLWESKLPENYQILVKKLFN 366
           P + DIPESCVAL+L YLD  +ICKLA LNRAF  AS AD +WESKLP NY+ +V+K   
Sbjct: 19  PRLGDIPESCVALVLMYLDPPDICKLARLNRAFRDASVADFIWESKLPSNYKFIVEKALK 78

Query: 367 FERTENLVKKDIYAMLCRPNRFDGGTKEVWLEKNGGGVCVCVSWKGLKITGIHDRRYWNH 546
               E L K+DIYA LCRPN FD GTKE+WL+K  GGVC+ +S + L+ITGI DRRYW+ 
Sbjct: 79  DASVEELGKRDIYARLCRPNSFDNGTKEIWLDKRTGGVCLAISSQALRITGIDDRRYWSR 138

Query: 547 ISTHESRFHTIAYLQQIW 600
           IST ESRFHT+AYLQQIW
Sbjct: 139 ISTEESRFHTVAYLQQIW 156


>ref|XP_002510835.1| ATPP2-A13, putative [Ricinus communis] gi|223549950|gb|EEF51437.1|
           ATPP2-A13, putative [Ricinus communis]
          Length = 286

 Score =  192 bits (487), Expect = 5e-47
 Identities = 92/158 (58%), Positives = 111/158 (70%)
 Frame = +1

Query: 127 MGTGFSXXXXXXXXXXXXXAPGIEDIPESCVALILTYLDTTEICKLACLNRAFYRASSAD 306
           MG GFS              P + D+PESC++ IL  LD  EICKLA LNR F+ AS AD
Sbjct: 1   MGAGFSSFASDSNGDPSSLGPTLGDVPESCISSILMCLDPPEICKLASLNRTFHGASLAD 60

Query: 307 LLWESKLPENYQILVKKLFNFERTENLVKKDIYAMLCRPNRFDGGTKEVWLEKNGGGVCV 486
           L+WE+KLP NY+ LV K+      + L KK IYA LC+PN FDGGTK+VWL+K+ G +C+
Sbjct: 61  LVWETKLPPNYKFLVMKVLQESPAQVLSKKQIYARLCQPNCFDGGTKQVWLDKSSGKICL 120

Query: 487 CVSWKGLKITGIHDRRYWNHISTHESRFHTIAYLQQIW 600
            VS+K L+ITGI DRRYWNHIS+ ESRF TIAYLQQIW
Sbjct: 121 SVSYKALRITGIDDRRYWNHISSEESRFQTIAYLQQIW 158


>ref|XP_002279586.1| PREDICTED: F-box protein PP2-A13 [Vitis vinifera]
          Length = 279

 Score =  188 bits (478), Expect = 5e-46
 Identities = 87/137 (63%), Positives = 105/137 (76%)
 Frame = +1

Query: 190 GIEDIPESCVALILTYLDTTEICKLACLNRAFYRASSADLLWESKLPENYQILVKKLFNF 369
           G+ D+PE+CVA +L YLD  +IC LA L++ F+ ASSAD +WESKLP NY+ LVKKL   
Sbjct: 16  GLSDVPENCVAEVLMYLDPPQICNLARLSKTFHMASSADFVWESKLPSNYKFLVKKLLA- 74

Query: 370 ERTENLVKKDIYAMLCRPNRFDGGTKEVWLEKNGGGVCVCVSWKGLKITGIHDRRYWNHI 549
           E  ENL KK+IYA LC+ N FDG  KEVWLEK+ GG+C  VSWK L+ITGI DRRYW H+
Sbjct: 75  EDPENLSKKEIYARLCQANSFDGANKEVWLEKSYGGICFAVSWKALRITGIDDRRYWKHL 134

Query: 550 STHESRFHTIAYLQQIW 600
              ESRFH++AYLQQIW
Sbjct: 135 PAEESRFHSMAYLQQIW 151


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