BLASTX nr result

ID: Panax21_contig00033242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033242
         (1780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY30433.1| hypothetical protein [Nicotiana tabacum]               253   2e-64
emb|CAN75887.1| hypothetical protein VITISV_024463 [Vitis vinifera]   222   3e-55
ref|XP_002272445.1| PREDICTED: uncharacterized protein LOC100246...   221   6e-55
ref|XP_004151085.1| PREDICTED: uncharacterized protein LOC101212...   190   1e-45
ref|XP_002314225.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-44

>gb|ACY30433.1| hypothetical protein [Nicotiana tabacum]
          Length = 376

 Score =  253 bits (645), Expect = 2e-64
 Identities = 133/252 (52%), Positives = 166/252 (65%), Gaps = 1/252 (0%)
 Frame = +2

Query: 497  LRDRTRLIEEATARITEQQRLLESQNPSPEISNSIAVEPGGFVGIGSELPNGEDSRVGLE 676
            + +R R +E  TAR  ++ R  +++           ++  G V    ++ N +      E
Sbjct: 1    IEERIRHLEAVTARALQRHRRRQART---------TIDTSGNVDSEMQVQNSDSVLDVAE 51

Query: 677  RTIERDRNCKSDNSHLVATALAMDLDV-KDGGGGGSFFDCNICLEMAKEPILTCCGHLFC 853
            RT+ER   CK D+SHLVA AL MDL V K    GGSFFDCNICL+MAKEPILTCCGHL+C
Sbjct: 52   RTVER--GCKRDSSHLVAKALEMDLVVNKVDDDGGSFFDCNICLDMAKEPILTCCGHLYC 109

Query: 854  WACFYQVDYVDSAIKECPVCKGQVKDSNITPIYGNGDNDHVSELESGLKIPPRPPAHRVE 1033
            W CFYQ+ YVDS  KECPVCKG+V D N+TP+YGNGD + ++ELESGLKIPPRP A RVE
Sbjct: 110  WPCFYQLPYVDSTTKECPVCKGEVADGNVTPVYGNGDGESITELESGLKIPPRPKARRVE 169

Query: 1034 SVRQQRVNRRISHIPVAEALRRIRIGIGATAEQPRQQGVGSATAGSDITSQVLPNTEAGA 1213
            SVRQQRV R +SHIPVAEALRRIR  IG    Q ++Q  G        +S VL   +  +
Sbjct: 170  SVRQQRVTRGLSHIPVAEALRRIRTSIG-LGHQAQRQDAGGVNLNFVRSSHVLQTADTLS 228

Query: 1214 TQHLRSRQFSRI 1249
            ++ LRSR  SR+
Sbjct: 229  SRRLRSRLISRV 240


>emb|CAN75887.1| hypothetical protein VITISV_024463 [Vitis vinifera]
          Length = 427

 Score =  222 bits (565), Expect = 3e-55
 Identities = 128/293 (43%), Positives = 170/293 (58%), Gaps = 14/293 (4%)
 Frame = +2

Query: 413  MDVDLNLEP------TXXXXXXXXXXXXXARGRILRDRTRLIEEATARITEQQRLLESQN 574
            MD+DLNLEP      +             A GRI  +R R +E   +R  ++QR  + + 
Sbjct: 1    MDLDLNLEPLDPPHDSMLGLGSLLTEIETAHGRI-EERIRQLEAVNSRARQRQRWRQGRI 59

Query: 575  PSPEISNSIAVEPGGFVGIGSELPNGEDSRVGLERTIERDRNCKSDNSHLVATALAMDLD 754
            P    + +I+ EP     I   + NGE S  G ERT+E    CK + ++LVA AL M  +
Sbjct: 60   PPQ--TTTISTEPMQVNSIEGRVQNGECSVAGQERTVENREGCKRNGAYLVAKALGMGTN 117

Query: 755  VKDGG-------GGGSFFDCNICLEMAKEPILTCCGHLFCWACFYQVDYVDSAIKECPVC 913
               G         GGSFFDCNICL++A++PILTCCGHLFCW CFYQ+  V S +KECPVC
Sbjct: 118  ANGGALEMGTNANGGSFFDCNICLDVARDPILTCCGHLFCWPCFYQLPNVHSNVKECPVC 177

Query: 914  KGQVKDSNITPIYGNGDNDH-VSELESGLKIPPRPPAHRVESVRQQRVNRRISHIPVAEA 1090
             G+V +++ITPIYG+G N+H V+  + G+K PPRP AHR+ES+RQQRV R I   P  E 
Sbjct: 178  NGEVIETHITPIYGHGSNNHKVATGDLGVKAPPRPHAHRIESMRQQRVARGIPSFPSEET 237

Query: 1091 LRRIRIGIGATAEQPRQQGVGSATAGSDITSQVLPNTEAGATQHLRSRQFSRI 1249
            LR I   I     +   +   +     + TSQV P +EA  +Q LRS QFSR+
Sbjct: 238  LRNISSRISRQQARTTTER-SNVLPSQNSTSQVPPGSEAEPSQGLRSVQFSRL 289


>ref|XP_002272445.1| PREDICTED: uncharacterized protein LOC100246046 [Vitis vinifera]
          Length = 436

 Score =  221 bits (562), Expect = 6e-55
 Identities = 133/304 (43%), Positives = 177/304 (58%), Gaps = 20/304 (6%)
 Frame = +2

Query: 398  RGNMAMDVDLNLEP------TXXXXXXXXXXXXXARGRILRDRTRLIEEATARITEQQRL 559
            RG++ MD+DLNLEP      +             A GRI  +R R +E   +R  ++QR 
Sbjct: 6    RGDI-MDLDLNLEPLDPPHDSMLGLGSLLTEIETAHGRI-EERIRQLEAVNSRARQRQRW 63

Query: 560  LESQNPSPEISNSIAVEPGGFVGIGSELPNGEDSRVGLERTIERDRNCKSDNSHLVATAL 739
             + + P    + +I+ EP     I   + NGE S  G ERT+E    CK + ++LVA AL
Sbjct: 64   RQGRIPPQ--TTTISTEPMQVNSIEGRVQNGECSVAGQERTVENREGCKRNGAYLVAKAL 121

Query: 740  AMDLDVKDGG-------GGGSFFDCNICLEMAKEPILTCCGHLFCWACFYQVDYVDSAIK 898
             M  +   G         GGSFFDCNICL+MA++PILTCCGHLFCW CFYQ+  V S +K
Sbjct: 122  GMGTNANGGALEMGTNANGGSFFDCNICLDMARDPILTCCGHLFCWPCFYQLPNVHSNVK 181

Query: 899  ECPVCKGQVKDSNITPIYGNGDNDH-VSELESGLKIPPRPPAHRVESVRQQRVNRRISHI 1075
            ECP C G+V +++ITPIYG+G N+H V+  + G+K PPRP AHR+ES+RQQRV R I   
Sbjct: 182  ECPECNGEVIETHITPIYGHGSNNHKVATGDLGVKAPPRPHAHRIESMRQQRVARGIPSF 241

Query: 1076 PVAEALRRIRIGIGATAEQPRQQGVGSATAGSDI------TSQVLPNTEAGATQHLRSRQ 1237
            P  E LR I       + Q  +Q   + T  S++      TSQV P +EA  +Q LRS Q
Sbjct: 242  PSEETLRII-------SSQISRQQARTTTERSNVLPSQNSTSQVPPGSEAEPSQGLRSVQ 294

Query: 1238 FSRI 1249
            FSR+
Sbjct: 295  FSRL 298


>ref|XP_004151085.1| PREDICTED: uncharacterized protein LOC101212429 [Cucumis sativus]
            gi|449501587|ref|XP_004161409.1| PREDICTED:
            uncharacterized protein LOC101226819 [Cucumis sativus]
          Length = 451

 Score =  190 bits (482), Expect = 1e-45
 Identities = 118/302 (39%), Positives = 161/302 (53%), Gaps = 23/302 (7%)
 Frame = +2

Query: 413  MDVDLNLEP------TXXXXXXXXXXXXXARGRILRDRTRLIEEATARITEQQRLLESQN 574
            MD+DLN EP      +             A GRI  +R R +E  T R T +QR   +  
Sbjct: 12   MDLDLNQEPLDQSYDSVLGLDTILNDLETAHGRI-EERIRQLEAVTTRATRRQRWRHA-- 68

Query: 575  PSPEISNSIAVEPGGFVGIGSELPNGEDSRVGLERTIERDRNCKSDNSHLVATALAMDLD 754
              P ++   A  P  +  +       +DS    +R +  ++  K +  HLVA AL MD +
Sbjct: 69   --PTVTEP-AETPAAYAHLERH-ETVDDSAAAQQRILHSEKTSKKNGPHLVAKALGMDSE 124

Query: 755  VKDGGGG-GSFFDCNICLEMAKEPILTCCGHLFCWACFYQVDYVDSAIKECPVCKGQVKD 931
             K  G   GS FDCNICL++AK+PILTCCGHLFCW+CFYQ+ YV S  KECP C+G+V D
Sbjct: 125  PKATGNKMGSLFDCNICLDVAKDPILTCCGHLFCWSCFYQLSYVHSNAKECPECQGEVTD 184

Query: 932  SNITPIYGNGDNDHVSEL---ESGLKIPPRPPAHRVESVRQQRVNRRISHIPVAEALRRI 1102
            ++I PIYG+G+ +   +    +SGLK+PPRP A R+ES+RQQ + R  S   + E +++I
Sbjct: 185  TSIIPIYGHGNGNRAQKSKPNDSGLKVPPRPRAQRIESMRQQILFRGTSSSIIEERIQQI 244

Query: 1103 RIGIGATAEQPRQQG-------------VGSATAGSDITSQVLPNTEAGATQHLRSRQFS 1243
               IGA  EQ R Q              +G     +   SQ LP  E   +Q  RS Q S
Sbjct: 245  SNMIGAMGEQSRSQNFDVTHGRIERTNLLGRRRRATQYASQALPVPENENSQQNRSLQVS 304

Query: 1244 RI 1249
            R+
Sbjct: 305  RL 306


>ref|XP_002314225.1| predicted protein [Populus trichocarpa] gi|222850633|gb|EEE88180.1|
            predicted protein [Populus trichocarpa]
          Length = 465

 Score =  186 bits (473), Expect = 1e-44
 Identities = 118/298 (39%), Positives = 162/298 (54%), Gaps = 19/298 (6%)
 Frame = +2

Query: 413  MDVDLNLEPTXXXXXXXXXXXXX-----ARGRILRDRTRLIEEATARITEQQRLLESQNP 577
            MD+DLN EP                       ++ +R R +E  T R  ++QR  +S   
Sbjct: 1    MDLDLNEEPLYSSNDSLLGLTTMWNELETTNGLIEERIRQLEAVTFRARQRQRWRQSHIT 60

Query: 578  SPEISNSIAVEPGGFVGIGSE--LPNGEDSRVGLERTIERDRNCKSDNSHLVATALAMDL 751
               +S  I+VEP   + + SE  L  GE S    ER  E ++  K ++++L+A AL  + 
Sbjct: 61   PQTVS--ISVEPAT-INVRSEGRLLIGEASVATEERRDEMNKFGKRNSAYLLAKALGRNG 117

Query: 752  DVKDGGGGGSFFDCNICLEMAKEPILTCCGHLFCWACFYQVDYVDSAIKECPVCKGQVKD 931
            + K+     S FDCNICL+MA++P+LTCCGHLFCW CFYQ+ YV S +KECPVC  +V D
Sbjct: 118  NGKEARSDRSVFDCNICLDMAQDPVLTCCGHLFCWPCFYQLSYVYSNVKECPVCMEEVTD 177

Query: 932  SNITPIYGNG---DNDHVSELESGLKIPPRPPAHRVESVRQQRVNRRISHIPVAEALRRI 1102
            ++I PIYGNG   DN+     ESGLK+PPRP A RVESVRQQ +NR +    + E +R  
Sbjct: 178  TSIIPIYGNGNSNDNNKHRLKESGLKVPPRPSAQRVESVRQQLINRGVFSSSIEERMRHF 237

Query: 1103 RIGIGATAEQPRQQGVGSATAGSD---------ITSQVLPNTEAGATQHLRSRQFSRI 1249
               + A  E PR + +      S+         ITS  LP+T A  +Q   S   SR+
Sbjct: 238  GNVLIAMGEIPRSEDLDDTHLESERISLLENQAITSLALPSTGAEVSQDYHSVHVSRL 295


Top