BLASTX nr result

ID: Panax21_contig00033208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033208
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21054.3| unnamed protein product [Vitis vinifera]              134   6e-30
emb|CAN81657.1| hypothetical protein VITISV_042595 [Vitis vinifera]   126   2e-27
ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820...   121   5e-26
ref|NP_194954.2| ubiquitin-like family protein [Arabidopsis thal...   119   2e-25
ref|XP_002515501.1| hypothetical protein RCOM_0923760 [Ricinus c...   119   2e-25

>emb|CBI21054.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/92 (67%), Positives = 75/92 (81%)
 Frame = +3

Query: 132 KGSFSCAFPFSPFLIIDSFVRKSFSYDKLPQEPLKLTILKLDGSSFKIDVVKTATVAELK 311
           K S S A  FSP L+I+   RK+  Y KLPQ+P+KL++LKLDGS F+I+V KT+TVAELK
Sbjct: 12  KVSRSAALRFSPLLVINGLSRKASFYWKLPQQPIKLSVLKLDGSCFQIEVTKTSTVAELK 71

Query: 312 NAVENAFSHLPKDGPGKVSWSHVWGHFCLCYD 407
            AVE+AFSHLPK GPGK+SW HVWGHFCLCY+
Sbjct: 72  QAVEDAFSHLPKKGPGKISWLHVWGHFCLCYN 103


>emb|CAN81657.1| hypothetical protein VITISV_042595 [Vitis vinifera]
          Length = 283

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/103 (60%), Positives = 75/103 (72%), Gaps = 11/103 (10%)
 Frame = +3

Query: 132 KGSFSCAFPFSPFLIIDSFVRKSFSYDKLPQEPLKLTILKLDGSSFKIDVVKTATVAELK 311
           K S S A  FSP L+I+   RK+  Y KLPQ+P+KL++LKLDGS F+I+V KT+TVAELK
Sbjct: 12  KVSRSAALRFSPLLVINGLSRKASFYWKLPQQPIKLSVLKLDGSCFQIEVTKTSTVAELK 71

Query: 312 NAVENAFSHLPKDGPGKVSW-----------SHVWGHFCLCYD 407
            AVE+AFSHLPK GPGK+SW            HVWGHFCLCY+
Sbjct: 72  QAVEDAFSHLPKKGPGKISWYFHCRYSHILGLHVWGHFCLCYN 114


>ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820296 [Glycine max]
          Length = 275

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
 Frame = +3

Query: 162 SPFLIIDS-FVRKSFSYDKLPQEPLKLTILKLDGSSFKIDVVKTATVAELKNAVENAFSH 338
           S   IID  F RKSF YD+LP +PL+LT+LKLDGS F I V KTATVAELK+AVE  FSH
Sbjct: 28  SSLAIIDGIFARKSFFYDRLPSQPLRLTVLKLDGSCFHIQVSKTATVAELKDAVEAVFSH 87

Query: 339 LPKDGPGKVSWSHVWGHFCLCYD 407
           +P  GP K+SW+HVWG FCLCYD
Sbjct: 88  VPHKGPAKISWAHVWGQFCLCYD 110


>ref|NP_194954.2| ubiquitin-like family protein [Arabidopsis thaliana]
           gi|26450559|dbj|BAC42392.1| unknown protein [Arabidopsis
           thaliana] gi|332660628|gb|AEE86028.1| ubiquitin-like
           family protein [Arabidopsis thaliana]
          Length = 239

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/89 (64%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
 Frame = +3

Query: 144 SCAFPFSPFLIIDSFVRK-SFSYDKLPQEPLKLTILKLDGSSFKIDVVKTATVAELKNAV 320
           S A   SP  +ID   R+ SF+Y+++P+EP+KLT+LKLDGSSF I V+KTATV ELK AV
Sbjct: 8   SLAASLSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGIQVLKTATVGELKMAV 67

Query: 321 ENAFSHLPKDGPGKVSWSHVWGHFCLCYD 407
           E AFSHLP  GPGK+SW HVWG FCL Y+
Sbjct: 68  EAAFSHLPISGPGKISWPHVWGQFCLSYE 96


>ref|XP_002515501.1| hypothetical protein RCOM_0923760 [Ricinus communis]
           gi|223545445|gb|EEF46950.1| hypothetical protein
           RCOM_0923760 [Ricinus communis]
          Length = 571

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/104 (54%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
 Frame = +3

Query: 102 DFSSRVSFGRKGSFSCAFPFSPFLIIDSFV--RKSFSYDKLPQEPLKLTILKLDGSSFKI 275
           D+  +VS G     S + P SPF I+D     R S SY  LP+EPLKL+ILKLDGS F +
Sbjct: 12  DYLPKVSVGHHRR-SSSLPLSPFTIVDGGYSRRSSVSYSMLPEEPLKLSILKLDGSCFDV 70

Query: 276 DVVKTATVAELKNAVENAFSHLPKDGPGKVSWSHVWGHFCLCYD 407
           +V+K+ATVAEL+ A+E  FSH+P+ GPGK+SW HVW HFCL ++
Sbjct: 71  EVMKSATVAELRQAIEAVFSHMPRKGPGKISWPHVWSHFCLMFE 114


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