BLASTX nr result

ID: Panax21_contig00033195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033195
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33717.3| unnamed protein product [Vitis vinifera]              213   2e-53
ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254...   213   2e-53
ref|NP_195467.1| Ribonuclease III family protein [Arabidopsis th...   205   5e-51
ref|XP_002866942.1| ribonuclease III family protein [Arabidopsis...   203   2e-50
ref|XP_002533159.1| RNA binding protein, putative [Ricinus commu...   200   1e-49

>emb|CBI33717.3| unnamed protein product [Vitis vinifera]
          Length = 286

 Score =  213 bits (542), Expect = 2e-53
 Identities = 101/110 (91%), Positives = 107/110 (97%)
 Frame = +2

Query: 14  VQDLVMAERLLMKHLDAPGRWLQEKHRRLLMNKFCGRYLREKSLHRFIIYSEEVQDSYEH 193
           +QD+VMAERLLMKHLDAPG+WLQEKHRRLLMNKFCGRYLR+K LHRFIIYSE+VQDSYEH
Sbjct: 177 IQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLRDKYLHRFIIYSEQVQDSYEH 236

Query: 194 NRRLRNPATTAVQQAIHGLSYTVYGKPDVRRLMFEVFDFEQIQPKEVLRT 343
           NRRLRNPATTAVQQAIHGLSY VYGKPDVRRLMFEVFDFEQIQPK VLR+
Sbjct: 237 NRRLRNPATTAVQQAIHGLSYLVYGKPDVRRLMFEVFDFEQIQPKPVLRS 286


>ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254381 [Vitis vinifera]
          Length = 542

 Score =  213 bits (542), Expect = 2e-53
 Identities = 101/110 (91%), Positives = 107/110 (97%)
 Frame = +2

Query: 14  VQDLVMAERLLMKHLDAPGRWLQEKHRRLLMNKFCGRYLREKSLHRFIIYSEEVQDSYEH 193
           +QD+VMAERLLMKHLDAPG+WLQEKHRRLLMNKFCGRYLR+K LHRFIIYSE+VQDSYEH
Sbjct: 433 IQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLRDKYLHRFIIYSEQVQDSYEH 492

Query: 194 NRRLRNPATTAVQQAIHGLSYTVYGKPDVRRLMFEVFDFEQIQPKEVLRT 343
           NRRLRNPATTAVQQAIHGLSY VYGKPDVRRLMFEVFDFEQIQPK VLR+
Sbjct: 493 NRRLRNPATTAVQQAIHGLSYLVYGKPDVRRLMFEVFDFEQIQPKPVLRS 542


>ref|NP_195467.1| Ribonuclease III family protein [Arabidopsis thaliana]
           gi|4468817|emb|CAB38218.1| putative protein [Arabidopsis
           thaliana] gi|7270733|emb|CAB80416.1| putative protein
           [Arabidopsis thaliana] gi|95147308|gb|ABF57289.1|
           At4g37510 [Arabidopsis thaliana]
           gi|332661403|gb|AEE86803.1| Ribonuclease III family
           protein [Arabidopsis thaliana]
          Length = 537

 Score =  205 bits (522), Expect = 5e-51
 Identities = 96/107 (89%), Positives = 101/107 (94%)
 Frame = +2

Query: 14  VQDLVMAERLLMKHLDAPGRWLQEKHRRLLMNKFCGRYLREKSLHRFIIYSEEVQDSYEH 193
           +QD+ MAERLLMKHLDAPG+WLQEKHRRLLMNKFCGRYLREK LH FIIYSEEV D YEH
Sbjct: 431 IQDIAMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEEVHDRYEH 490

Query: 194 NRRLRNPATTAVQQAIHGLSYTVYGKPDVRRLMFEVFDFEQIQPKEV 334
           NRRLRNPATTAVQQAIHGL+YT+YGKPDVRRLMFEVFDFEQIQPK V
Sbjct: 491 NRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537


>ref|XP_002866942.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312778|gb|EFH43201.1| ribonuclease III family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 537

 Score =  203 bits (517), Expect = 2e-50
 Identities = 95/107 (88%), Positives = 100/107 (93%)
 Frame = +2

Query: 14  VQDLVMAERLLMKHLDAPGRWLQEKHRRLLMNKFCGRYLREKSLHRFIIYSEEVQDSYEH 193
           +QD+ MAERLLMKHLDAPG+WLQEKHRRLLMNKFCGRYLREK LH FI YSEEV D YEH
Sbjct: 431 IQDIAMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFITYSEEVHDRYEH 490

Query: 194 NRRLRNPATTAVQQAIHGLSYTVYGKPDVRRLMFEVFDFEQIQPKEV 334
           NRRLRNPATTAVQQAIHGL+YT+YGKPDVRRLMFEVFDFEQIQPK V
Sbjct: 491 NRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537


>ref|XP_002533159.1| RNA binding protein, putative [Ricinus communis]
           gi|223527031|gb|EEF29218.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 532

 Score =  200 bits (509), Expect = 1e-49
 Identities = 93/107 (86%), Positives = 103/107 (96%)
 Frame = +2

Query: 14  VQDLVMAERLLMKHLDAPGRWLQEKHRRLLMNKFCGRYLREKSLHRFIIYSEEVQDSYEH 193
           +QDLV+AERLLMKHLDAPG+WLQE+HRRLLMNKFCGRYLR+K LH FI+YSE+V D+YE+
Sbjct: 426 IQDLVLAERLLMKHLDAPGKWLQERHRRLLMNKFCGRYLRDKHLHHFIVYSEQVIDAYEN 485

Query: 194 NRRLRNPATTAVQQAIHGLSYTVYGKPDVRRLMFEVFDFEQIQPKEV 334
           NRRLRNPATTAVQQA+HGLSYTVYGKPDVRRLMFEVFDFEQIQPK V
Sbjct: 486 NRRLRNPATTAVQQALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 532


Top