BLASTX nr result

ID: Panax21_contig00033194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033194
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283855.1| PREDICTED: glucose-1-phosphate adenylyltrans...    58   7e-07
ref|XP_002313036.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
gb|AAF66436.1|AF249917_1 ADP-glucose pyrophosphorylase large sub...    55   6e-06

>ref|XP_002283855.1| PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1
           [Vitis vinifera]
          Length = 527

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = -3

Query: 186 MDLCGATLKANVHPMQICKG-VNHGDGGFWGKKISGSFKNRGSGTQPSKNLTTQNRNRKI 10
           MD C  T KA  H  +  +G +++GD  FWG++I GS  N G  +Q +K L T+ R RKI
Sbjct: 1   MDSCCVTFKAKAHLAKASRGGLSNGDNEFWGERIRGSLNNSGWVSQLAKGLKTEKRPRKI 60

Query: 9   KPG 1
           KPG
Sbjct: 61  KPG 63


>ref|XP_002313036.1| predicted protein [Populus trichocarpa] gi|222849444|gb|EEE86991.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = -3

Query: 186 MDLCGATLKANVHPMQICKG-VNHGDGGFWGKKISGSFKNRGSGTQPSKNLTTQNRNRKI 10
           MD C ATLKAN H  +  KG  N+GD  FWG++I GSF N     Q +K+L       K 
Sbjct: 1   MDSCCATLKANTHVAKASKGGFNNGDKEFWGERIRGSFNNSVWVNQLAKSLKVDKSVNKF 60

Query: 9   KPG 1
           KPG
Sbjct: 61  KPG 63


>gb|AAF66436.1|AF249917_1 ADP-glucose pyrophosphorylase large subunit [Perilla frutescens]
          Length = 527

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/63 (46%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = -3

Query: 186 MDLCGATLKANVHPMQICKGVNHGD-GGFWGKKISGSFKNRGSGTQPSKNLTTQNRNRKI 10
           MD C ATLK+  H   + K    G+  GFWG+KI GS  N     Q  K L  + R RKI
Sbjct: 1   MDACCATLKSTSHLSNVSKSAFCGEKNGFWGEKIKGSLNNCARAYQFGKKLNLEKRGRKI 60

Query: 9   KPG 1
           KPG
Sbjct: 61  KPG 63


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