BLASTX nr result

ID: Panax21_contig00033181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033181
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex su...   133   2e-29
emb|CBI24630.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...   131   5e-29
emb|CBI16596.3| unnamed protein product [Vitis vinifera]              130   8e-29
ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex su...   127   1e-27

>ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
            vinifera]
          Length = 1586

 Score =  133 bits (334), Expect = 2e-29
 Identities = 75/145 (51%), Positives = 89/145 (61%), Gaps = 2/145 (1%)
 Frame = +1

Query: 1    KALEQFVDRLIEWPQYCNHILQISHLRGTHSELVAFIERALARISSGHSELDVGHVNVAD 180
            KALEQF+DRLIEWPQYC HILQISHLRGTH ELVAFIERALAR SS HSE + G+ +  D
Sbjct: 943  KALEQFLDRLIEWPQYCYHILQISHLRGTHPELVAFIERALARTSSSHSESNGGNNSSTD 1002

Query: 181  QHHGSIPA--GHVEMLGTSFPLIGSSSTQAGPXXXXXXXXXXXXXXXXXXXNKASVPLSN 354
             H GS PA   +VE+  +S+ L+GS +TQ G                    +K S  L N
Sbjct: 1003 PHSGSAPATLENVEVPDSSWQLLGSRTTQPGQQTSSPLPAQQRHQGFLGDRHKTSASLIN 1062

Query: 355  YMKPVLSSAGQPSVVPPSDTSSNQK 429
            Y +P+L   G  S V  SD   +QK
Sbjct: 1063 YGRPILPPTGHASNVSTSDALGSQK 1087


>emb|CBI24630.3| unnamed protein product [Vitis vinifera]
          Length = 1496

 Score =  133 bits (334), Expect = 2e-29
 Identities = 75/145 (51%), Positives = 89/145 (61%), Gaps = 2/145 (1%)
 Frame = +1

Query: 1    KALEQFVDRLIEWPQYCNHILQISHLRGTHSELVAFIERALARISSGHSELDVGHVNVAD 180
            KALEQF+DRLIEWPQYC HILQISHLRGTH ELVAFIERALAR SS HSE + G+ +  D
Sbjct: 783  KALEQFLDRLIEWPQYCYHILQISHLRGTHPELVAFIERALARTSSSHSESNGGNNSSTD 842

Query: 181  QHHGSIPA--GHVEMLGTSFPLIGSSSTQAGPXXXXXXXXXXXXXXXXXXXNKASVPLSN 354
             H GS PA   +VE+  +S+ L+GS +TQ G                    +K S  L N
Sbjct: 843  PHSGSAPATLENVEVPDSSWQLLGSRTTQPGQQTSSPLPAQQRHQGFLGDRHKTSASLIN 902

Query: 355  YMKPVLSSAGQPSVVPPSDTSSNQK 429
            Y +P+L   G  S V  SD   +QK
Sbjct: 903  YGRPILPPTGHASNVSTSDALGSQK 927


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score =  131 bits (330), Expect = 5e-29
 Identities = 79/150 (52%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
 Frame = +1

Query: 4    ALEQFVDRLIEWPQYCNHILQISHLRGTHSELVAFIERALARISSGHSELD-VGHVNVAD 180
            ALEQFVDRLIEWPQYCNHILQISHLR THSE+VAFIE+ALARISSGHS++D   H +V  
Sbjct: 783  ALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHSDVDGASHASVIS 842

Query: 181  QHHGS-IPAGHVEMLG------TSFPLIGSSSTQAGPXXXXXXXXXXXXXXXXXXXNKAS 339
             HH +    GHVE++        +  L GSS  Q G                     KAS
Sbjct: 843  NHHSAQASLGHVEVVNDYSVGPIAVQLSGSSVIQPGQQHLSMQLQQRRENPLDDRL-KAS 901

Query: 340  VPLSNYMKPVLSSAGQPSVVPPSDTSSNQK 429
            V  S  +KP+LSS GQ SV+ P+D SS  K
Sbjct: 902  VGSSTDVKPLLSSLGQSSVLTPTDASSTNK 931


>emb|CBI16596.3| unnamed protein product [Vitis vinifera]
          Length = 2452

 Score =  130 bits (328), Expect = 8e-29
 Identities = 73/145 (50%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
 Frame = +1

Query: 1    KALEQFVDRLIEWPQYCNHILQISHLRGTHSELVAFIERALARISSGHSELDVGHVNVAD 180
            KALEQF DRL+EWPQYCNHILQISHLR TH +LVAF+E+ LAR+SSGH E D G+ N  D
Sbjct: 804  KALEQFADRLVEWPQYCNHILQISHLRNTHPDLVAFVEQTLARVSSGHLESDGGN-NSDD 862

Query: 181  QHHGS--IPAGHVEMLGTSFPLIGSSSTQAGPXXXXXXXXXXXXXXXXXXXNKASVPLSN 354
            QHHGS  + + ++EM  +S   +G+SS Q  P                   +KASV LSN
Sbjct: 863  QHHGSTQLTSVNMEMSASSLQSLGASSIQ--PGQPSSLPLQHRLQSSLDDRHKASVTLSN 920

Query: 355  YMKPVLSSAGQPSVVPPSDTSSNQK 429
              KP+++ AG+P V    D +S  K
Sbjct: 921  STKPLVAPAGEPLVASSGDATSIDK 945


>ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2327

 Score =  127 bits (318), Expect = 1e-27
 Identities = 76/144 (52%), Positives = 89/144 (61%), Gaps = 2/144 (1%)
 Frame = +1

Query: 4    ALEQFVDRLIEWPQYCNHILQISHLRGTHSELVAFIERALARISSGHSELD-VGHVNVAD 180
            ALEQFVDRLIEWPQYCNHILQISHLR THSE+V+FIE+ALARISSGH ++D   H +V  
Sbjct: 769  ALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVSFIEQALARISSGHLDVDGASHASVIS 828

Query: 181  QHHGS-IPAGHVEMLGTSFPLIGSSSTQAGPXXXXXXXXXXXXXXXXXXXNKASVPLSNY 357
             HH +    GHVE       L GSS  Q G                    +KASV  S  
Sbjct: 829  NHHSAQATIGHVE-------LSGSSVIQPG-QQHLSLQLQQRRENPLDDRHKASVGSSTD 880

Query: 358  MKPVLSSAGQPSVVPPSDTSSNQK 429
            +KP+LSS G+ SV+ P+D SS  K
Sbjct: 881  VKPLLSSLGKSSVLTPTDASSTNK 904


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