BLASTX nr result

ID: Panax21_contig00033178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033178
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...    99   5e-19
ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    91   1e-16
ref|XP_002527481.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
emb|CAN68679.1| hypothetical protein VITISV_041942 [Vitis vinifera]    72   6e-11

>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449531147|ref|XP_004172549.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 379

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/131 (41%), Positives = 77/131 (58%), Gaps = 6/131 (4%)
 Frame = -2

Query: 435 LGFGFDCKNDDYKVVRIGYFQGDNV------AHKVDVYTVKGRTWRGIGGPPPRYRIVEY 274
           LGFGFD   DD+KVVR+ YF  D V      + KV++Y V   +WR I    PR  IV  
Sbjct: 147 LGFGFDSCADDHKVVRLLYF-ADKVPFSYKRSPKVELYEVGTGSWRAINNKAPRCEIVRS 205

Query: 273 YWSQAFVNGAVHWVAYHWSEGLGSKLSCLIMSFDMRDEVFNEMLLPEELVHKSPMNMFTA 94
            W+QAFVNGAVHW+AY     +G+   C I+ FD+  E F+ + LP+ L + SP ++   
Sbjct: 206 GWTQAFVNGAVHWIAY---REIGTGYRCFILRFDIVKECFSIITLPDCLANSSPYDLKVT 262

Query: 93  KIGESLALFQC 61
            +G +L++  C
Sbjct: 263 VLGGALSITLC 273


>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
 Frame = -2

Query: 435 LGFGFDCKNDDYKVVRIGYFQGDNVAH------KVDVYTVKGRTWRGIGGPPPRYRIVEY 274
           LGFGFD + +D+K+VR+ Y +G    +      +V++Y +   +WR I    P Y I++ 
Sbjct: 151 LGFGFDSRANDFKLVRLVYIEGGPPVYDYELPPRVELYQLSTGSWRQITDSAPCYEILKS 210

Query: 273 YWSQAFVNGAVHWVAYHWSEGLGSKLSCLIMSFDMRDEVFNEMLLPEELVHKSPMNMFTA 94
            W+Q F+N AVHW+A+  S        C+I+ F M  E F+ + LP+ LV++ P N+  A
Sbjct: 211 QWTQIFMNEAVHWIAFIRSR---RGFRCVILRFHMDGEYFSTIPLPDCLVNEFPQNLKVA 267

Query: 93  KIGESLALFQC 61
            +G  L + QC
Sbjct: 268 MLGGELCVLQC 278


>ref|XP_002527481.1| conserved hypothetical protein [Ricinus communis]
           gi|223533121|gb|EEF34879.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 6/136 (4%)
 Frame = -2

Query: 444 MVVLGFGFDCKNDDYKVVRIGYFQGDN-----VAHKVDVYTVKGRTWRG-IGGPPPRYRI 283
           M VLGFGFD K+ +YKVVR+ Y   +N     +  +V+VY +    WR  I    P+Y I
Sbjct: 1   MFVLGFGFDPKSSEYKVVRVVYRMRENGCKVDIRPQVEVYELGMNAWRSIIVSAAPQYVI 60

Query: 282 VEYYWSQAFVNGAVHWVAYHWSEGLGSKLSCLIMSFDMRDEVFNEMLLPEELVHKSPMNM 103
            E    Q F+NGAVHW+ Y+            ++ FDM  EVF+EM LP+ +   S +++
Sbjct: 61  SELS-LQVFLNGAVHWIGYNPRHEGSDFRDLSMVLFDMDKEVFDEMKLPDSVCGLSVLDL 119

Query: 102 FTAKIGESLALFQCDR 55
                G+ L+L Q +R
Sbjct: 120 SVVASGKVLSLVQYNR 135


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
 Frame = -2

Query: 435 LGFGFDCKNDDYKVVRIGYFQGDNVAHK----VDVYTVKGRTWRGIGGPPPRYRIVEYYW 268
           +GFG+D + +DYK++R+  FQ      +    + +Y++   +WRGI    P     +   
Sbjct: 146 VGFGYDSRANDYKLIRMVSFQKSKFRSENFPEIALYSLNEGSWRGIRQTGPLRYDTDQRV 205

Query: 267 SQAFVNGAVHWVAYHWSEGLGSKLSCLIMSFDMRDEVFNEMLLPEELVHKSP 112
           S AF+NG VHW+AY   +  G  +S +++ FDM DE+F E+ LP  L +  P
Sbjct: 206 SSAFLNGVVHWIAYRADQHEG--VSNVVLGFDMSDEIFLEIALPSCLANVRP 255


>emb|CAN68679.1| hypothetical protein VITISV_041942 [Vitis vinifera]
          Length = 327

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 50/130 (38%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
 Frame = -2

Query: 444 MVVLGFG-FDCKND-DYKVVRIGYFQGDNVAHK--VDVYTVKGRTWRGIGGPPPRYRIVE 277
           ++V+GFG  +C N  DYK+V++ Y+  DN      V VY++   +WR I   PP Y  V+
Sbjct: 160 VLVVGFGCIECNNKYDYKIVQVLYYFSDNAFQHSYVTVYSLWSNSWRRIRATPPCYTNVD 219

Query: 276 YYWSQAFVNGAVHWVAYHWSEGLGSKLSC-LIMSFDMRDEVFNEMLLPEELVHKSPMNMF 100
              S AFVN AVHW A        S   C +IM+FD+R+EVF E+ LP+       M  +
Sbjct: 220 V--SNAFVNEAVHWRAE-------SSADCWVIMAFDLREEVFREIPLPDHHHDYYSMYWY 270

Query: 99  TAKIGESLAL 70
            A   E L++
Sbjct: 271 IAVFEELLSV 280


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